vtkMRMLGlyphableVolumeSliceDisplayNode Class Reference

MRML node to represent display properties for tractography. More...

#include <Libs/MRML/Core/vtkMRMLGlyphableVolumeSliceDisplayNode.h>

Inheritance diagram for vtkMRMLGlyphableVolumeSliceDisplayNode:

Collaboration diagram for vtkMRMLGlyphableVolumeSliceDisplayNode:

Public Types
enum	{ colorModeSolid = 0 , colorModeScalar = 1 , colorModeFunctionOfScalar = 2 , colorModeUseCellScalars = 3 }
	Display Information: Geometry to display (not mutually exclusive) More...
typedef vtkMRMLModelDisplayNode	Superclass
Public Types inherited from vtkMRMLModelDisplayNode
enum	SliceDisplayModeType { SliceDisplayIntersection , SliceDisplayProjection , SliceDisplayDistanceEncodedProjection , SliceDisplayMode_Last }
typedef vtkMRMLDisplayNode	Superclass
Public Types inherited from vtkMRMLDisplayNode
enum	{ MenuEvent = 16100 }
enum	InterpolationType { FlatInterpolation = 0 , GouraudInterpolation , PhongInterpolation , PBRInterpolation }
enum	RepresentationType { PointsRepresentation = 0 , WireframeRepresentation , SurfaceRepresentation }
enum	ScalarRangeFlagType {   UseManualScalarRange = 0 , UseDataScalarRange , UseColorNodeScalarRange , UseDataTypeScalarRange ,   UseDirectMapping , NUM_SCALAR_RANGE_FLAGS }
enum	ShowModeType { ShowDefault = 0 , ShowIgnore , ShowMode_Last }
	Enumerated values for ShowMode. More...
typedef vtkMRMLNode	Superclass
Public Types inherited from vtkMRMLNode
enum	{   HierarchyModifiedEvent = 16000 , IDChangedEvent = 16001 , ReferenceAddedEvent , ReferenceModifiedEvent ,   ReferenceRemovedEvent , ReferencedNodeModifiedEvent }
enum	ContentModifiedObserveType { ContentModifiedObserveUndefined = -1 , ContentModifiedObserveDisabled = 0 , ContentModifiedObserveEnabled = 1 }
typedef std::map< std::string, std::string >	ReferencePropertiesType
	Get the node reference properties for a specific referenceRole.
typedef vtkObject	Superclass

Public Member Functions
void	Copy (vtkMRMLNode *node) override
	Copy the node's attributes to this object.
vtkMRMLNode *	CreateNodeInstance () override
	MRMLNode methods.
virtual const char *	GetClassName ()
virtual int	GetColorMode ()
	Display Information: ColorMode for ALL nodes.
const char *	GetNodeTagName () override
	Get node XML tag name (like Volume, UnstructuredGrid)
vtkPolyData *	GetOutputMesh () override
vtkAlgorithmOutput *	GetOutputMeshConnection () override
virtual vtkAlgorithmOutput *	GetSliceImagePort ()
virtual vtkPolyData *	GetSliceOutputPolyData ()
virtual vtkAlgorithmOutput *	GetSliceOutputPort ()
virtual int	IsA (const char *type)
void	PrintSelf (ostream &os, vtkIndent indent) override
void	ProcessMRMLEvents (vtkObject *, unsigned long, void *) override
	alternative method to propagate events generated in Display nodes
void	ReadXMLAttributes (const char **atts) override
	Read node attributes from XML (MRML) file.
virtual void	SetColorMode (int)
void	SetColorModeToFunctionOfScalar ()
void	SetColorModeToScalar ()
	Color according to the tensors using various scalar invariants.
void	SetColorModeToSolid ()
	Color by solid color (for example the whole fiber bundle red. blue, etc.)
void	SetColorModeToUseCellScalars ()
virtual void	SetSliceGlyphRotationMatrix (vtkMatrix4x4 *matrix)
	Set slice to IJK transformation.
virtual void	SetSliceImagePort (vtkAlgorithmOutput *imagePort)
virtual void	SetSlicePositionMatrix (vtkMatrix4x4 *matrix)
	Set slice to RAS transformation.
void	UpdateAssignedAttribute () override
	Update the pipeline based on this node attributes.
void	UpdateReferenceID (const char *oldID, const char *newID) override
	Update the stored reference to another node in the scene.
void	UpdateReferences () override
void	UpdateScene (vtkMRMLScene *scene) override
	Finds the storage node and read the data.
void	WriteXML (ostream &of, int indent) override
	Write this node's information to a MRML file in XML format.
Public Member Functions inherited from vtkMRMLModelDisplayNode
virtual void	ClippingCapSurfaceOff ()
virtual void	ClippingCapSurfaceOn ()
virtual void	ClippingOutlineOff ()
virtual void	ClippingOutlineOn ()
vtkMRMLNode *	CreateNodeInstance () override
	Create instance of the default node. Like New only virtual.
virtual vtkDataArray *	GetActiveScalarArray () override
	Return the current active scalar array (based on active scalar name and location)
virtual double *	GetBackfaceColorHSVOffset ()
virtual void	GetBackfaceColorHSVOffset (double &, double &, double &)
virtual void	GetBackfaceColorHSVOffset (double[3])
virtual double *	GetClippingCapColorHSVOffset ()
virtual void	GetClippingCapColorHSVOffset (double &, double &, double &)
virtual void	GetClippingCapColorHSVOffset (double[3])
virtual double	GetClippingCapOpacity ()
virtual bool	GetClippingCapSurface ()
virtual bool	GetClippingOutline ()
virtual vtkMRMLColorNode *	GetDistanceEncodedProjectionColorNode ()
virtual const char *	GetDistanceEncodedProjectionColorNodeID ()
virtual vtkPointSet *	GetInputMesh ()
virtual vtkAlgorithmOutput *	GetInputMeshConnection ()
virtual vtkPolyData *	GetInputPolyData ()
virtual vtkAlgorithmOutput *	GetInputPolyDataConnection ()
virtual vtkUnstructuredGrid *	GetInputUnstructuredGrid ()
const char *	GetNodeTagName () override
	Get node XML tag name (like Volume, Model)
virtual vtkPolyData *	GetOutputPolyData ()
virtual vtkAlgorithmOutput *	GetOutputPolyDataConnection ()
virtual vtkUnstructuredGrid *	GetOutputUnstructuredGrid ()
virtual vtkDataSet *	GetScalarDataSet () override
virtual int	GetSliceDisplayMode ()
virtual bool	GetThresholdEnabled ()
double	GetThresholdMax ()
double	GetThresholdMin ()
double *	GetThresholdRange () VTK_SIZEHINT(2)
void	GetThresholdRange (double range[2])
void	PrintSelf (ostream &os, vtkIndent indent) override
void	ReadXMLAttributes (const char **atts) override
	Read node attributes from XML file.
void	SetActiveAttributeLocation (int location) override
void	SetActiveScalarName (const char *scalarName) override
virtual void	SetAndObserveDistanceEncodedProjectionColorNodeID (const char *colorNodeID)
virtual void	SetBackfaceColorHSVOffset (double, double, double)
virtual void	SetBackfaceColorHSVOffset (double[3])
virtual void	SetClippingCapColorHSVOffset (double, double, double)
virtual void	SetClippingCapColorHSVOffset (double[3])
virtual void	SetClippingCapOpacity (double)
virtual void	SetClippingCapSurface (bool)
virtual void	SetClippingOutline (bool)
virtual void	SetInputMeshConnection (vtkAlgorithmOutput *meshConnection)
virtual void	SetInputPolyDataConnection (vtkAlgorithmOutput *polyDataConnection)
virtual void	SetSliceDisplayMode (int)
void	SetSliceDisplayModeToDistanceEncodedProjection ()
void	SetSliceDisplayModeToIntersection ()
void	SetSliceDisplayModeToProjection ()
void	SetThresholdEnabled (bool enabled)
void	SetThresholdRange (double min, double max)
void	SetThresholdRange (double range[2])
virtual void	ThresholdEnabledOff ()
virtual void	ThresholdEnabledOn ()
	vtkMRMLCopyContentMacro (vtkMRMLModelDisplayNode)
void	WriteXML (ostream &of, int indent) override
	Write this node's information to a MRML file in XML format.
Public Member Functions inherited from vtkMRMLDisplayNode
void	AddViewNodeID (const char *viewNodeID)
void	AutoScalarRangeOff ()
void	AutoScalarRangeOn ()
virtual void	BackfaceCullingOff ()
virtual void	BackfaceCullingOn ()
virtual void	ClippingOff ()
virtual void	ClippingOn ()
virtual void	EdgeVisibilityOff ()
virtual void	EdgeVisibilityOn ()
virtual void	FolderDisplayOverrideAllowedOff ()
virtual void	FolderDisplayOverrideAllowedOn ()
virtual void	FrontfaceCullingOff ()
virtual void	FrontfaceCullingOn ()
virtual int	GetActiveAttributeLocation ()
const char *	GetActiveAttributeLocationAsString ()
virtual char *	GetActiveScalarName ()
virtual double	GetAmbient ()
int	GetAutoScalarRange ()
virtual int	GetBackfaceCulling ()
virtual vtkMRMLClipNode *	GetClipNode ()
virtual const char *	GetClipNodeReferenceRole () const
virtual int	GetClipping ()
virtual double *	GetColor ()
virtual void	GetColor (double &, double &, double &)
virtual void	GetColor (double[3])
virtual vtkMRMLColorNode *	GetColorNode ()
virtual char *	GetColorNodeID ()
virtual double	GetDiffuse ()
virtual vtkMRMLDisplayableNode *	GetDisplayableNode ()
virtual double *	GetEdgeColor ()
virtual void	GetEdgeColor (double &, double &, double &)
virtual void	GetEdgeColor (double[3])
virtual int	GetEdgeVisibility ()
virtual bool	GetFolderDisplayOverrideAllowed ()
virtual int	GetFrontfaceCulling ()
virtual int	GetInterpolateTexture ()
virtual int	GetInterpolation ()
virtual int	GetLighting ()
virtual double	GetLineWidth ()
virtual double	GetMetallic ()
const char *	GetNthViewNodeID (unsigned int index)
int	GetNumberOfViewNodeIDs () const
virtual double	GetOpacity ()
virtual double	GetPointSize ()
virtual double	GetPower ()
virtual int	GetRepresentation ()
virtual double	GetRoughness ()
virtual double *	GetScalarRange ()
virtual void	GetScalarRange (double &, double &)
virtual void	GetScalarRange (double[2])
virtual int	GetScalarRangeFlag ()
const char *	GetScalarRangeFlagAsString ()
virtual int	GetScalarVisibility ()
virtual double	GetSelectedAmbient ()
virtual double *	GetSelectedColor ()
virtual void	GetSelectedColor (double &, double &, double &)
virtual void	GetSelectedColor (double[3])
virtual double	GetSelectedSpecular ()
virtual int	GetShading ()
virtual int	GetShowMode ()
virtual double	GetSliceIntersectionOpacity ()
virtual int	GetSliceIntersectionThickness ()
int	GetSliceIntersectionVisibility ()
virtual double	GetSpecular ()
virtual int	GetTensorVisibility ()
virtual vtkAlgorithmOutput *	GetTextureImageDataConnection ()
virtual int	GetVectorVisibility ()
std::vector< std::string >	GetViewNodeIDs () const
virtual int	GetVisibility ()
virtual bool	GetVisibility (const char *viewNodeID)
virtual int	GetVisibility2D ()
virtual int	GetVisibility3D ()
virtual void	InterpolateTextureOff ()
virtual void	InterpolateTextureOn ()
bool	IsDisplayableInView (const char *viewNodeID) const
bool	IsShowModeDefault ()
bool	IsViewNodeIDPresent (const char *viewNodeID) const
virtual void	LightingOff ()
virtual void	LightingOn ()
void	PrintSelf (ostream &os, vtkIndent indent) override
void	RemoveAllViewNodeIDs ()
void	RemoveViewNodeID (char *viewNodeID)
virtual void	ScalarVisibilityOff ()
virtual void	ScalarVisibilityOn ()
void	SetActiveAttributeLocationFromString (const char *str)
virtual void	SetActiveScalar (const char *scalarName, int location)
virtual void	SetAmbient (double)
virtual void	SetAndObserveClipNodeID (const char *id)
	Set the clip node ID of the display node.
virtual void	SetAndObserveColorNodeID (const char *ColorNodeID)
void	SetAndObserveColorNodeID (const std::string &ColorNodeID)
void	SetAutoScalarRange (int b)
virtual void	SetBackfaceCulling (int)
virtual void	SetClipping (int)
virtual void	SetColor (double, double, double)
virtual void	SetColor (double[3])
virtual void	SetDiffuse (double)
void	SetDisplayableOnlyInView (const char *viewNodeID)
virtual void	SetEdgeColor (double, double, double)
virtual void	SetEdgeColor (double[3])
virtual void	SetEdgeVisibility (int)
virtual void	SetFolderDisplayOverrideAllowed (bool)
virtual void	SetFrontfaceCulling (int)
virtual void	SetInterpolateTexture (int)
virtual void	SetInterpolation (int)
virtual void	SetLighting (int)
virtual void	SetLineWidth (double)
virtual void	SetMetallic (double)
virtual void	SetOpacity (double)
virtual void	SetPointSize (double)
virtual void	SetPower (double)
virtual void	SetRepresentation (int)
virtual void	SetRoughness (double)
virtual void	SetScalarRange (double, double)
void	SetScalarRange (double[2])
virtual void	SetScalarRangeFlag (int flag)
void	SetScalarRangeFlagFromString (const char *str)
virtual void	SetScalarVisibility (int)
void	SetSceneReferences () override
	Mark the color and views nodes as references.
virtual void	SetSelectedAmbient (double)
virtual void	SetSelectedColor (double, double, double)
virtual void	SetSelectedColor (double[3])
virtual void	SetSelectedSpecular (double)
virtual void	SetShading (int)
virtual void	SetShowMode (int)
virtual void	SetSliceIntersectionOpacity (double)
virtual void	SetSliceIntersectionThickness (int)
void	SetSliceIntersectionVisibility (int on)
virtual void	SetSpecular (double)
virtual void	SetTensorVisibility (int)
virtual void	SetTextureImageDataConnection (vtkAlgorithmOutput *ImageDataConnection)
virtual void	SetVectorVisibility (int)
void	SetViewNodeIDs (const std::vector< std::string > &viewNodeIDs)
virtual void	SetVisibility (int)
virtual void	SetVisibility2D (int)
virtual void	SetVisibility3D (int)
void	SliceIntersectionVisibilityOff ()
void	SliceIntersectionVisibilityOn ()
virtual void	TensorVisibilityOff ()
virtual void	TensorVisibilityOn ()
virtual void	UpdateScalarRange ()
virtual void	VectorVisibilityOff ()
virtual void	VectorVisibilityOn ()
virtual void	Visibility2DOff ()
virtual void	Visibility2DOn ()
virtual void	Visibility3DOff ()
virtual void	Visibility3DOn ()
virtual void	VisibilityOff ()
virtual void	VisibilityOn ()
	vtkMRMLCopyContentMacro (vtkMRMLDisplayNode)
Public Member Functions inherited from vtkMRMLNode
vtkMRMLNode *	AddAndObserveNodeReferenceID (const char *referenceRole, const char *referencedNodeID, vtkIntArray *events=nullptr, ContentModifiedObserveType observeContentModifiedEvents=ContentModifiedObserveUndefined)
	Add and observe a reference node from this node for a specific referenceRole.
vtkMRMLNode *	AddNodeReferenceID (const char *referenceRole, const char *referencedNodeID)
	Convenience method that adds a referencedNodeID at the end of the list.
void	AddNodeReferenceRole (const char *referenceRole, const char *mrmlAttributeName=nullptr, vtkIntArray *events=nullptr, bool observeContentModifiedEvents=false)
	Add a referenceRole.
virtual void	AddToSceneOff ()
virtual void	AddToSceneOn ()
void	ClearNodeReferenceProperties (const std::string &referenceRole)
	Remove all node reference properties for a specific referenceRole.
void	ClearNthNodeReferenceProperties (const std::string &referenceRole, int n)
virtual void	CopyContent (vtkMRMLNode *node, bool deepCopy=true)
	Copy node contents from another node of the same type. Does not copy node ID, Scene, Name, SingletonTag, HideFromEditors, AddToScene, UndoEnabled, and node references. If deepCopy is set to false then a shallow copy of bulk data (such as image or mesh data) could be made; copying may be faster but the node may share some data with the source node instead of creating an independent copy.
virtual void	CopyReferences (vtkMRMLNode *node)
	Copy the references of the node into this.
void	CopyWithScene (vtkMRMLNode *node)
	Copy everything (including Scene and ID) from another node of the same type.
void	DisableModifiedEventOff ()
void	DisableModifiedEventOn ()
virtual int	EndModify (int previousDisableModifiedEventState)
	End modifying the node.
virtual int	GetAddToScene ()
	node added to MRML scene.
const char *	GetAttribute (const char *name)
	Get value of a name value pair attribute.
std::vector< std::string >	GetAttributeNames ()
	Get all attribute names.
void	GetAttributeNames (vtkStringArray *attributeNames)
	Get all attribute names. Python-wrappable version.
virtual vtkIntArray *	GetContentModifiedEvents ()
int	GetCustomModifiedEventPending (int eventId)
virtual char *	GetDescription ()
virtual int	GetDisableModifiedEvent ()
	Turn on/off generating InvokeEvent for set macros.
virtual int	GetHideFromEditors ()
	Describes if the node is hidden.
virtual char *	GetID ()
	ID use by other nodes to reference this node in XML.
virtual int	GetInMRMLCallbackFlag ()
	Flags to avoid event loops.
virtual int	GetModifiedEventPending ()
virtual char *	GetName ()
vtkMRMLNode *	GetNodeReference (const char *referenceRole)
const char *	GetNodeReferenceID (const char *referenceRole)
	Utility function that returns the first node id for a specific referenceRole.
void	GetNodeReferenceIDs (const char *referenceRole, std::vector< const char * > &referencedNodeIDs)
	Return a list of the referenced node IDs.
const ReferencePropertiesType *	GetNodeReferenceProperties (const char *referenceRole)
std::string	GetNodeReferenceProperty (const std::string &referenceRole, const std::string &propertyName)
	Get the node reference property for a specific referenceRole.
std::string	GetNodeReferencePropertyName (const std::string &referenceRole, int propertyIndex)
	Get the name of the Nth node reference property for a specific referenceRole.
std::vector< std::string >	GetNodeReferencePropertyNames (const std::string &referenceRole)
	Get the names of all node reference properties for a specific referenceRole.
void	GetNodeReferenceRoles (std::vector< std::string > &roles)
void	GetNodeReferences (const char *referenceRole, std::vector< vtkMRMLNode * > &nodes)
	Return a list of the referenced nodes.
vtkMRMLNode *	GetNthNodeReference (const char *referenceRole, int n)
	Get referenced MRML node for a specific referenceRole.
const char *	GetNthNodeReferenceID (const char *referenceRole, int n)
	Return the string of the Nth node ID for a specific reference role.
const ReferencePropertiesType *	GetNthNodeReferenceProperties (const char *referenceRole, int n)
std::string	GetNthNodeReferenceProperty (const std::string &referenceRole, int n, const std::string &propertyName)
std::string	GetNthNodeReferencePropertyName (const std::string &referenceRole, int referenceIndex, int propertyIndex)
std::vector< std::string >	GetNthNodeReferencePropertyNames (const std::string &referenceRole, int n)
const char *	GetNthNodeReferenceRole (int n)
int	GetNumberOfNodeReferenceProperties (const std::string &referenceRole)
	Get the number of node reference properties for a specific referenceRole.
int	GetNumberOfNodeReferenceRoles ()
int	GetNumberOfNodeReferences (const char *referenceRole)
	Return the number of node IDs for a specific reference role (and nodes as they always have the same size).
int	GetNumberOfNthNodeReferenceProperties (const std::string &referenceRole, int n)
virtual int	GetSaveWithScene ()
	Save node with MRML scene.
virtual vtkMRMLScene *	GetScene ()
	Get the scene this node has been added to.
virtual int	GetSelectable ()
	Describes if the node is selectable.
virtual int	GetSelected ()
	Get/Set for Selected.
virtual char *	GetSingletonTag ()
virtual const char *	GetTypeDisplayName ()
virtual bool	GetUndoEnabled ()
virtual bool	HasCopyContent () const
	Returns true if the class supports deep and shallow copying node content.
bool	HasNodeReferenceID (const char *referenceRole, const char *referencedNodeID)
	Return true if referencedNodeID is in the node ID list for a specific referenceRole.
virtual void	HideFromEditorsOff ()
virtual void	HideFromEditorsOn ()
virtual void	InvokeCustomModifiedEvent (int eventId, void *callData=nullptr)
	This method allows the node to compress events.
virtual int	InvokePendingModifiedEvent ()
	Invokes any modified events that are pending.
bool	IsSingleton ()
void	Modified () override
	Customized version of Modified() allowing to compress vtkCommand::ModifiedEvent.
virtual void	OnNodeAddedToScene ()
void	PrintSelf (ostream &os, vtkIndent indent) override
virtual void	ProcessChildNode (vtkMRMLNode *)
	Set dependencies between this node and a child node when parsing XML file.
void	RemoveAttribute (const char *name)
	Remove attribute with the specified name.
void	RemoveNodeReferenceIDs (const char *referenceRole)
	Remove all node IDs and associated nodes for a specific referenceRole.
void	RemoveNodeReferenceProperty (const std::string &referenceRole, const std::string &propertyName)
	Remove a node reference property for a specific referenceRole.
void	RemoveNthNodeReferenceID (const char *referenceRole, int n)
	Convenience method that removes the Nth node ID from the list.
void	RemoveNthNodeReferenceProperty (const std::string &referenceRole, int n, const std::string &propertyName)
virtual void	Reset (vtkMRMLNode *defaultNode)
	Reset node attributes to the initial state as defined in the constructor or the passed default node.
virtual void	SaveWithSceneOff ()
virtual void	SaveWithSceneOn ()
virtual void	SelectableOff ()
virtual void	SelectableOn ()
virtual void	SelectedOff ()
virtual void	SelectedOn ()
virtual void	SetAddToScene (int)
void	SetAddToSceneNoModify (int value)
vtkMRMLNode *	SetAndObserveNodeReferenceID (const char *referenceRole, const char *referencedNodeID, vtkIntArray *events=nullptr, ContentModifiedObserveType observeContentModifiedEvents=ContentModifiedObserveUndefined)
	Set and observe a reference node from this node for a specific referenceRole.
vtkMRMLNode *	SetAndObserveNthNodeReferenceID (const char *referenceRole, int n, const char *referencedNodeID, vtkIntArray *events=nullptr, ContentModifiedObserveType observeContentModifiedEvents=ContentModifiedObserveUndefined)
	Set and observe the Nth node ID for a specific reference role.
void	SetAttribute (const char *name, const char *value)
	Set a name value pair attribute.
virtual void	SetDescription (const char *)
	Text description of this node, to be set by the user.
void	SetDisableModifiedEvent (int onOff)
virtual void	SetHideFromEditors (int)
void	SetInMRMLCallbackFlag (int flag)
virtual void	SetName (const char *)
	Name of this node, to be set by the user.
vtkMRMLNode *	SetNodeReferenceID (const char *referenceRole, const char *referencedNodeID)
	Set a reference to a node with specified nodeID from this node for a specific referenceRole.
void	SetNodeReferenceProperty (const std::string &referenceRole, const std::string &propertyName, const std::string &value)
	Set the node reference property for a specific referenceRole.
vtkMRMLNode *	SetNthNodeReferenceID (const char *referenceRole, int n, const char *referencedNodeID)
	Set a N-th reference from this node with specified referencedNodeID for a specific referenceRole.
void	SetNthNodeReferenceProperty (const std::string &referenceRole, int n, const std::string &propertyName, const std::string &value)
virtual void	SetSaveWithScene (int)
virtual void	SetScene (vtkMRMLScene *scene)
	This method is for internal use only. Use AddNode method of vtkMRMLScene to add a node to the scene.
virtual void	SetSelectable (int)
virtual void	SetSelected (int)
void	SetSingletonOff ()
void	SetSingletonOn ()
virtual void	SetSingletonTag (const char *)
	Tag that make this node a singleton in the scene.
virtual void	SetUndoEnabled (bool)
virtual int	StartModify ()
	Start modifying the node. Disable Modify events.
virtual void	UndoEnabledOff ()
virtual void	UndoEnabledOn ()
const char *	URLDecodeString (const char *inString)
	Decode a URL string.
const char *	URLEncodeString (const char *inString)
	Encode a URL string.
virtual void	WriteNodeBodyXML (ostream &of, int indent)
	Write this node's body to a MRML file in XML format.
std::string	XMLAttributeDecodeString (const std::string &inString)
	Decode an XML attribute string.
std::string	XMLAttributeEncodeString (const std::string &inString)
	Encode an XML attribute string (replaces special characters by code sequences)

Static Public Member Functions
static int	IsTypeOf (const char *type)
static vtkMRMLGlyphableVolumeSliceDisplayNode *	New ()
static vtkMRMLGlyphableVolumeSliceDisplayNode *	SafeDownCast (vtkObject *o)
Static Public Member Functions inherited from vtkMRMLModelDisplayNode
static const char *	GetSliceDisplayModeAsString (int id)
	Convert between slice display mode ID and name.
static int	GetSliceDisplayModeFromString (const char *name)
static int	IsTypeOf (const char *type)
static vtkMRMLModelDisplayNode *	New ()
static vtkMRMLModelDisplayNode *	SafeDownCast (vtkObject *o)
Static Public Member Functions inherited from vtkMRMLDisplayNode
static const char *	GetAttributeLocationAsString (int id)
	Converts attribute location (point or cell data) to string.
static int	GetAttributeLocationFromString (const char *name)
	Gets attribute location (point or cell data) from string.
static const char *	GetScalarRangeFlagTypeAsString (int flag)
static int	GetScalarRangeFlagTypeFromString (const char *name)
	Gets scalar range flag type from string.
static const char *	GetShowModeAsString (int flag)
static int	GetShowModeFromString (const char *name)
static std::string	GetTextPropertyAsString (vtkTextProperty *property)
static int	IsTypeOf (const char *type)
static vtkMRMLDisplayNode *	SafeDownCast (vtkObject *o)
static void	UpdateTextPropertyFromString (std::string inputString, vtkTextProperty *property)
Static Public Member Functions inherited from vtkMRMLNode
static int	IsTypeOf (const char *type)
static vtkMRMLNode *	SafeDownCast (vtkObject *o)

Protected Member Functions
void	operator= (const vtkMRMLGlyphableVolumeSliceDisplayNode &)
virtual void	SetInputToPolyDataPipeline (vtkAlgorithmOutput *glyphPolyData)
	Ignore input polydata as it takes a volume slice as input.
	vtkMRMLGlyphableVolumeSliceDisplayNode ()
	Display Information: ColorMode for glyphs.
	vtkMRMLGlyphableVolumeSliceDisplayNode (const vtkMRMLGlyphableVolumeSliceDisplayNode &)
	~vtkMRMLGlyphableVolumeSliceDisplayNode () override
Protected Member Functions inherited from vtkMRMLModelDisplayNode
void	operator= (const vtkMRMLModelDisplayNode &)
void	ProcessMRMLEvents (vtkObject *caller, unsigned long event, void *callData) override
virtual void	SetInputToMeshPipeline (vtkAlgorithmOutput *meshConnection)
	To be reimplemented in subclasses if the input of the pipeline changes.
	vtkMRMLModelDisplayNode ()
	vtkMRMLModelDisplayNode (const vtkMRMLModelDisplayNode &)
	~vtkMRMLModelDisplayNode () override
Protected Member Functions inherited from vtkMRMLDisplayNode
void	operator= (const vtkMRMLDisplayNode &)
virtual void	SetColorNodeInternal (vtkMRMLColorNode *newColorNode)
	vtkMRMLDisplayNode ()
	vtkMRMLDisplayNode (const vtkMRMLDisplayNode &)
	~vtkMRMLDisplayNode () override
Protected Member Functions inherited from vtkMRMLNode
virtual const char *	GetMRMLAttributeNameFromReferenceRole (const char *refRole)
	Return the mrml attribute name (if found) associated with a reference role. Return 0 otherwise.
virtual const char *	GetReferenceRoleFromMRMLAttributeName (const char *attName)
	Return the reference role (if found) associated with the attribute name found in a MRML scene file. Return 0 otherwise.
virtual char *	GetTempURLString ()
void	GetUpdatedReferencedNodeEventList (int &oldReferencedNodeUseCount, int &newReferencedNodeUseCount, vtkIntArray *oldConsolidatedEventList, vtkIntArray *newConsolidatedEventList, vtkMRMLNode *oldReferencedNode, vtkMRMLNode *newReferencedNode, vtkMRMLNodeReference *referenceToIgnore, vtkIntArray *newEvents, bool newObserveContentModifiedEvents)
virtual void	InvalidateNodeReferences ()
virtual bool	IsReferenceRoleGeneric (const char *refRole)
	Return true if the reference role is generic (ends with '/') or false otherwise.
std::string	NodeReferencePropertyDecodeString (const std::string &inString)
	Decode a node reference property string.
std::string	NodeReferencePropertyEncodeString (const std::string &inString)
	Encode a node reference property string (replaces special characters by code sequences)
virtual void	OnNodeReferenceAdded (vtkMRMLNodeReference *reference)
virtual void	OnNodeReferenceModified (vtkMRMLNodeReference *reference)
	Called when a referenced node pointer is modified.
virtual void	OnNodeReferenceRemoved (vtkMRMLNodeReference *reference)
	Called when a referenced node pointer is removed (set to nullptr).
void	operator= (const vtkMRMLNode &)
void	ParseReferencesAttribute (const char *attValue, std::set< std::string > &references)
void	RemoveInvalidReferences (const std::set< std::string > &validNodeIDs)
virtual void	SetTempURLString (const char *)
	Get/Set the string used to manage encoding/decoding of strings/URLs with special characters.
vtkMRMLNode *	UpdateNodeReferenceEventObserver (vtkMRMLNode *oldReferencedNode, vtkMRMLNode *newReferencedNode, vtkIntArray *newEvents, bool newObserveContentModifiedEvents, vtkMRMLNodeReference *referenceToIgnore)
virtual void	UpdateNodeReferences (const char *referenceRole=nullptr)
virtual void	UpdateNthNodeReference (const char *referenceRole, int n)
	vtkMRMLNode ()
	vtkMRMLNode (const vtkMRMLNode &)
	~vtkMRMLNode () override
	critical to have a virtual destructor!

Protected Attributes
int	ColorMode
	Enumerated.
vtkAlgorithmOutput *	SliceImagePort
vtkMatrix4x4 *	SliceToXYMatrix
vtkTransform *	SliceToXYTransform
vtkTransformPolyDataFilter *	SliceToXYTransformer
Protected Attributes inherited from vtkMRMLModelDisplayNode
vtkAssignAttribute *	AssignAttribute
double	BackfaceColorHSVOffset [3]
double	ClippingCapColorHSVOffset [3]
double	ClippingCapOpacity { 1.0 }
bool	ClippingCapSurface { false }
bool	ClippingOutline { false }
vtkGeometryFilter *	ConvertToPolyDataFilter
vtkPassThrough *	PassThrough
int	SliceDisplayMode
bool	ThresholdEnabled
vtkThreshold *	ThresholdFilter
double	ThresholdRangeTemp [2]
	Temporary variable to allow GetThresholdRange() method to return threshold range as a pointer.
Protected Attributes inherited from vtkMRMLDisplayNode
int	ActiveAttributeLocation
char *	ActiveScalarName
double	Ambient
int	BackfaceCulling
int	Clipping
double	Color [3]
vtkMRMLColorNode *	ColorNode
char *	ColorNodeID
double	Diffuse
double	EdgeColor [3]
int	EdgeVisibility
bool	FolderDisplayOverrideAllowed
int	FrontfaceCulling
int	InterpolateTexture
int	Interpolation
vtkWeakPointer< vtkMRMLDisplayableNode >	LastFoundDisplayableNode
	Cached value of last found displayable node (it is expensive to determine it)
int	Lighting
double	LineWidth
double	Metallic
double	Opacity
double	PointSize
double	Power
int	Representation
double	Roughness
double	ScalarRange [2]
int	ScalarRangeFlag
int	ScalarVisibility
double	SelectedAmbient
double	SelectedColor [3]
double	SelectedSpecular
int	Shading
int	ShowMode
double	SliceIntersectionOpacity
int	SliceIntersectionThickness
double	Specular
int	TensorVisibility
vtkAlgorithmOutput *	TextureImageDataConnection
int	VectorVisibility
std::vector< std::string >	ViewNodeIDs
int	Visibility
int	Visibility2D
int	Visibility3D
Protected Attributes inherited from vtkMRMLNode
int	AddToScene {1}
AttributesType	Attributes
vtkIntArray *	ContentModifiedEvents
char *	Description {nullptr}
int	HideFromEditors {0}
char *	ID {nullptr}
int	InMRMLCallbackFlag {0}
	Flag to avoid event loops.
vtkCallbackCommand *	MRMLCallbackCommand
	Holders for MRML callbacks.
vtkObserverManager *	MRMLObserverManager
char *	Name {nullptr}
NodeReferenceEventsType	NodeReferenceEvents
std::map< std::string, std::string >	NodeReferenceMRMLAttributeNames
NodeReferencesType	NodeReferences
int	SaveWithScene {true}
vtkWeakPointer< vtkMRMLScene >	Scene
int	Selectable {1}
int	Selected {0}
bool	UndoEnabled {false}

Additional Inherited Members
Protected Types inherited from vtkMRMLNode
typedef std::map< std::string, std::string >	AttributesType
typedef std::map< std::string, NodeReferenceEventList >	NodeReferenceEventsType
typedef std::vector< vtkSmartPointer< vtkMRMLNodeReference > >	NodeReferenceListType
typedef std::map< std::string, NodeReferenceListType >	NodeReferencesType
Static Protected Member Functions inherited from vtkMRMLDisplayNode
static void	GetColorFromString (const std::string &colorString, double color[4])
Static Protected Member Functions inherited from vtkMRMLNode
static void	MRMLCallback (vtkObject *caller, unsigned long eid, void *clientData, void *callData)

Detailed Description

MRML node to represent display properties for tractography.

vtkMRMLGlyphableVolumeSliceDisplayNode nodes store display properties of trajectories from tractography in diffusion MRI data, including color type (by bundle, by fiber, or by scalar invariants), display on/off for tensor glyphs and display of trajectory as a line or tube.

Definition at line 35 of file vtkMRMLGlyphableVolumeSliceDisplayNode.h.

Member Typedef Documentation

Superclass

typedef vtkMRMLModelDisplayNode vtkMRMLGlyphableVolumeSliceDisplayNode::Superclass

Definition at line 39 of file vtkMRMLGlyphableVolumeSliceDisplayNode.h.

Member Enumeration Documentation

anonymous enum

anonymous enum

Display Information: Geometry to display (not mutually exclusive)

Display Information: Color Mode 0) solid color by group 1) color by scalar invariant 2) color by avg scalar invariant 3) color by other

Enumerator
colorModeSolid
colorModeScalar
colorModeFunctionOfScalar
colorModeUseCellScalars

Definition at line 136 of file vtkMRMLGlyphableVolumeSliceDisplayNode.h.

Constructor & Destructor Documentation

vtkMRMLGlyphableVolumeSliceDisplayNode() [1/2]

vtkMRMLGlyphableVolumeSliceDisplayNode::vtkMRMLGlyphableVolumeSliceDisplayNode ( )

protected

Display Information: ColorMode for glyphs.

MRML nodes that are observed

~vtkMRMLGlyphableVolumeSliceDisplayNode()

vtkMRMLGlyphableVolumeSliceDisplayNode::~vtkMRMLGlyphableVolumeSliceDisplayNode ( )

overrideprotected

vtkMRMLGlyphableVolumeSliceDisplayNode() [2/2]

vtkMRMLGlyphableVolumeSliceDisplayNode::vtkMRMLGlyphableVolumeSliceDisplayNode ( const vtkMRMLGlyphableVolumeSliceDisplayNode & )

protected

Member Function Documentation

Copy()

void vtkMRMLGlyphableVolumeSliceDisplayNode::Copy ( vtkMRMLNode * node )

overridevirtual

Copy the node's attributes to this object.

Reimplemented from vtkMRMLNode.

CreateNodeInstance()

vtkMRMLNode * vtkMRMLGlyphableVolumeSliceDisplayNode::CreateNodeInstance ( )

overridevirtual

MRMLNode methods.

Implements vtkMRMLNode.

GetClassName()

virtual const char * vtkMRMLGlyphableVolumeSliceDisplayNode::GetClassName ( )

virtual

Reimplemented from vtkMRMLModelDisplayNode.

Reimplemented in vtkMRMLDiffusionTensorVolumeSliceDisplayNode.

GetColorMode()

virtual int vtkMRMLGlyphableVolumeSliceDisplayNode::GetColorMode ( )

virtual

Display Information: ColorMode for ALL nodes.

Description: Color mode for glyphs. The color modes are mutually exclusive.

GetNodeTagName()

const char * vtkMRMLGlyphableVolumeSliceDisplayNode::GetNodeTagName ( )

inlineoverridevirtual

Get node XML tag name (like Volume, UnstructuredGrid)

Implements vtkMRMLNode.

Definition at line 63 of file vtkMRMLGlyphableVolumeSliceDisplayNode.h.

GetOutputMesh()

vtkPolyData * vtkMRMLGlyphableVolumeSliceDisplayNode::GetOutputMesh ( )

overridevirtual

Return the glyph polydata for the input slice image. This is the polydata to use in a 3D view. Reimplemented to by-pass the check on the input polydata.

See also

GetSliceOutputPolyData(), GetOutputPolyDataConnection()

Reimplemented from vtkMRMLModelDisplayNode.

GetOutputMeshConnection()

vtkAlgorithmOutput * vtkMRMLGlyphableVolumeSliceDisplayNode::GetOutputMeshConnection ( )

overridevirtual

Return the output of the glyph producer for the input image data. The output is connected as the input of the slice transform. It must be reimplemented in subclasses.

See also

GetOutputPolyData(), GetSliceOutputPort()

Reimplemented from vtkMRMLModelDisplayNode.

GetSliceImagePort()

virtual vtkAlgorithmOutput * vtkMRMLGlyphableVolumeSliceDisplayNode::GetSliceImagePort ( )

virtual

GetSliceOutputPolyData()

virtual vtkPolyData * vtkMRMLGlyphableVolumeSliceDisplayNode::GetSliceOutputPolyData ( )

virtual

Return the glyph polyData transformed to slice XY. This is the polydata to use in a 2D slice.

See also

GetOutputPolyData(), GetSliceOutputPort()

GetSliceOutputPort()

virtual vtkAlgorithmOutput * vtkMRMLGlyphableVolumeSliceDisplayNode::GetSliceOutputPort ( )

virtual

Return the glyph output transformed to slice XY. Return the output of the glyph producer for the entire volume.

See also

GetSliceOutputPolyData(), GetOutputPolyDataConnection()

IsA()

virtual int vtkMRMLGlyphableVolumeSliceDisplayNode::IsA ( const char * type )

virtual

Reimplemented from vtkMRMLModelDisplayNode.

Reimplemented in vtkMRMLDiffusionTensorVolumeSliceDisplayNode.

IsTypeOf()

static int vtkMRMLGlyphableVolumeSliceDisplayNode::IsTypeOf ( const char * type )

static

New()

static vtkMRMLGlyphableVolumeSliceDisplayNode * vtkMRMLGlyphableVolumeSliceDisplayNode::New ( )

static

operator=()

void vtkMRMLGlyphableVolumeSliceDisplayNode::operator= ( const vtkMRMLGlyphableVolumeSliceDisplayNode & )

protected

PrintSelf()

void vtkMRMLGlyphableVolumeSliceDisplayNode::PrintSelf ( ostream & os, vtkIndent indent )

override

ProcessMRMLEvents()

void vtkMRMLGlyphableVolumeSliceDisplayNode::ProcessMRMLEvents ( vtkObject * , unsigned long , void *  )

overridevirtual

alternative method to propagate events generated in Display nodes

Reimplemented from vtkMRMLDisplayNode.

ReadXMLAttributes()

void vtkMRMLGlyphableVolumeSliceDisplayNode::ReadXMLAttributes ( const char ** atts )

overridevirtual

Read node attributes from XML (MRML) file.

Reimplemented from vtkMRMLDisplayNode.

SafeDownCast()

static vtkMRMLGlyphableVolumeSliceDisplayNode * vtkMRMLGlyphableVolumeSliceDisplayNode::SafeDownCast ( vtkObject * o )

static

SetColorMode()

virtual void vtkMRMLGlyphableVolumeSliceDisplayNode::SetColorMode ( int )

virtual

SetColorModeToFunctionOfScalar()

void vtkMRMLGlyphableVolumeSliceDisplayNode::SetColorModeToFunctionOfScalar ( )

inline

Color according to the tensors using a function of scalar invariants along the tract. This enables coloring by average FA, for example.

Definition at line 168 of file vtkMRMLGlyphableVolumeSliceDisplayNode.h.

SetColorModeToScalar()

void vtkMRMLGlyphableVolumeSliceDisplayNode::SetColorModeToScalar ( )

inline

Color according to the tensors using various scalar invariants.

Definition at line 161 of file vtkMRMLGlyphableVolumeSliceDisplayNode.h.

SetColorModeToSolid()

void vtkMRMLGlyphableVolumeSliceDisplayNode::SetColorModeToSolid ( )

inline

Color by solid color (for example the whole fiber bundle red. blue, etc.)

Definition at line 155 of file vtkMRMLGlyphableVolumeSliceDisplayNode.h.

SetColorModeToUseCellScalars()

void vtkMRMLGlyphableVolumeSliceDisplayNode::SetColorModeToUseCellScalars ( )

inline

Use to color by the active cell scalars. This is intended to support external processing of fibers, for example to label each with the distance of that fiber from an fMRI activation. Then by making that information the active cell scalar field, this will allow coloring by that information. TO DO: make sure this information can be saved with the tract, save name of active scalar field if needed.

Definition at line 179 of file vtkMRMLGlyphableVolumeSliceDisplayNode.h.

SetInputToPolyDataPipeline()

virtual void vtkMRMLGlyphableVolumeSliceDisplayNode::SetInputToPolyDataPipeline ( vtkAlgorithmOutput * glyphPolyData )

protectedvirtual

Ignore input polydata as it takes a volume slice as input.

SetSliceGlyphRotationMatrix()

virtual void vtkMRMLGlyphableVolumeSliceDisplayNode::SetSliceGlyphRotationMatrix ( vtkMatrix4x4 * matrix )

virtual

Set slice to IJK transformation.

Reimplemented in vtkMRMLDiffusionTensorVolumeSliceDisplayNode.

SetSliceImagePort()

virtual void vtkMRMLGlyphableVolumeSliceDisplayNode::SetSliceImagePort ( vtkAlgorithmOutput * imagePort )

virtual

Set imageData of a volume slice. This is used as the input of the display pipeline instead of SetInputPolyData().

See also

GetOutputPolyData(), SetInputPolyData()

Reimplemented in vtkMRMLDiffusionTensorVolumeSliceDisplayNode.

SetSlicePositionMatrix()

virtual void vtkMRMLGlyphableVolumeSliceDisplayNode::SetSlicePositionMatrix ( vtkMatrix4x4 * matrix )

virtual

Set slice to RAS transformation.

Reimplemented in vtkMRMLDiffusionTensorVolumeSliceDisplayNode.

UpdateAssignedAttribute()

void vtkMRMLGlyphableVolumeSliceDisplayNode::UpdateAssignedAttribute ( )

overridevirtual

Update the pipeline based on this node attributes.

Reimplemented from vtkMRMLModelDisplayNode.

UpdateReferenceID()

void vtkMRMLGlyphableVolumeSliceDisplayNode::UpdateReferenceID ( const char * oldID, const char * newID )

inlineoverridevirtual

Update the stored reference to another node in the scene.

Reimplemented from vtkMRMLDisplayNode.

Definition at line 70 of file vtkMRMLGlyphableVolumeSliceDisplayNode.h.

UpdateReferences()

void vtkMRMLGlyphableVolumeSliceDisplayNode::UpdateReferences ( )

overridevirtual

Updates this node if it depends on other nodes when the node is deleted in the scene

Reimplemented from vtkMRMLDisplayNode.

UpdateScene()

void vtkMRMLGlyphableVolumeSliceDisplayNode::UpdateScene ( vtkMRMLScene * scene )

overridevirtual

Finds the storage node and read the data.

Reimplemented from vtkMRMLDisplayNode.

WriteXML()

void vtkMRMLGlyphableVolumeSliceDisplayNode::WriteXML ( ostream & of, int indent )

overridevirtual

Write this node's information to a MRML file in XML format.

Reimplemented from vtkMRMLDisplayNode.

Member Data Documentation

ColorMode

int vtkMRMLGlyphableVolumeSliceDisplayNode::ColorMode

protected

Enumerated.

Definition at line 209 of file vtkMRMLGlyphableVolumeSliceDisplayNode.h.

SliceImagePort

vtkAlgorithmOutput* vtkMRMLGlyphableVolumeSliceDisplayNode::SliceImagePort

protected

Definition at line 202 of file vtkMRMLGlyphableVolumeSliceDisplayNode.h.

SliceToXYMatrix

vtkMatrix4x4* vtkMRMLGlyphableVolumeSliceDisplayNode::SliceToXYMatrix

protected

Definition at line 205 of file vtkMRMLGlyphableVolumeSliceDisplayNode.h.

SliceToXYTransform

vtkTransform* vtkMRMLGlyphableVolumeSliceDisplayNode::SliceToXYTransform

protected

Definition at line 203 of file vtkMRMLGlyphableVolumeSliceDisplayNode.h.

SliceToXYTransformer

vtkTransformPolyDataFilter* vtkMRMLGlyphableVolumeSliceDisplayNode::SliceToXYTransformer

protected

Definition at line 204 of file vtkMRMLGlyphableVolumeSliceDisplayNode.h.

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The documentation for this class was generated from the following file:

• Libs/MRML/Core/vtkMRMLGlyphableVolumeSliceDisplayNode.h