Slicer  4.11
Slicer is a multi-platform, free and open source software package for visualization and medical image computing
qSlicerSegmentEditorAbstractEffect.h
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1 /*==============================================================================
2 
3  Copyright (c) Laboratory for Percutaneous Surgery (PerkLab)
4  Queen's University, Kingston, ON, Canada. All Rights Reserved.
5 
6  See COPYRIGHT.txt
7  or http://www.slicer.org/copyright/copyright.txt for details.
8 
9  Unless required by applicable law or agreed to in writing, software
10  distributed under the License is distributed on an "AS IS" BASIS,
11  WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
12  See the License for the specific language governing permissions and
13  limitations under the License.
14 
15  This file was originally developed by Csaba Pinter, PerkLab, Queen's University
16  and was supported through the Applied Cancer Research Unit program of Cancer Care
17  Ontario with funds provided by the Ontario Ministry of Health and Long-Term Care
18 
19 ==============================================================================*/
20 
21 #ifndef __qSlicerSegmentEditorAbstractEffect_h
22 #define __qSlicerSegmentEditorAbstractEffect_h
23 
24 // Segmentations Editor Effects includes
25 #include "qSlicerSegmentationsEditorEffectsExport.h"
26 
27 // Qt includes
28 #include <QCursor>
29 #include <QIcon>
30 #include <QPoint>
31 #include <QList>
32 #include <QVector3D>
33 
34 // VTK includes
35 #include "vtkWeakPointer.h"
36 
37 class qSlicerSegmentEditorAbstractEffectPrivate;
38 
39 class vtkActor2D;
41 class vtkMRMLScene;
46 class vtkSegment;
47 class vtkRenderer;
48 class vtkRenderWindow;
49 class vtkRenderWindowInteractor;
51 class vtkProp3D;
52 class qMRMLWidget;
53 class qMRMLSliceWidget;
54 class QColor;
55 class QFormLayout;
56 class QFrame;
57 class QLayout;
58 
61 class Q_SLICER_SEGMENTATIONS_EFFECTS_EXPORT qSlicerSegmentEditorAbstractEffect : public QObject
62 {
63 public:
64  Q_OBJECT
65  Q_ENUMS(ConfirmationResult)
66  Q_ENUMS(ModificationMode)
67 
68 
69  Q_PROPERTY(QString name READ name WRITE setName)
72 
73 
74  Q_PROPERTY(bool perSegment READ perSegment WRITE setPerSegment)
78 
79 
80  Q_PROPERTY(bool requireSegments READ requireSegments WRITE setRequireSegments)
84 
85 
86  Q_PROPERTY(bool showEffectCursorInSliceView READ showEffectCursorInSliceView WRITE setShowEffectCursorInSliceView)
88 
89 
90  Q_PROPERTY(bool showEffectCursorInThreeDView READ showEffectCursorInThreeDView WRITE setShowEffectCursorInThreeDView)
92 
93 public:
94  typedef QObject Superclass;
95  qSlicerSegmentEditorAbstractEffect(QObject* parent = nullptr);
97 
98 // API: Methods that are to be reimplemented in the effect subclasses
99 public:
100 
102  {
106  ModificationModeRemoveAll
107  };
108 
110  {
114  };
115 
117  virtual QIcon icon() { return QIcon(); };
118 
120  Q_INVOKABLE virtual const QString helpText()const { return QString(); };
121 
123  virtual qSlicerSegmentEditorAbstractEffect* clone() = 0;
124 
127  Q_INVOKABLE virtual void activate();
128 
131  Q_INVOKABLE virtual void deactivate();
132 
134  Q_INVOKABLE virtual bool active();
135 
136  Q_INVOKABLE virtual void modifySelectedSegmentByLabelmap(vtkOrientedImageData* modifierLabelmap,
137  ModificationMode modificationMode, const int modificationExtent[6],bool bypassMasking = false);
138  Q_INVOKABLE virtual void modifySelectedSegmentByLabelmap(vtkOrientedImageData* modifierLabelmap,
139  ModificationMode modificationMode, bool bypassMasking = false);
140  Q_INVOKABLE virtual void modifySelectedSegmentByLabelmap(vtkOrientedImageData* modifierLabelmap,
141  ModificationMode modificationMode, QList<int> extent, bool bypassMasking = false);
142  Q_INVOKABLE virtual void modifySegmentByLabelmap(vtkMRMLSegmentationNode* segmentationNode, const char* segmentID,
143  vtkOrientedImageData* modifierLabelmap, ModificationMode modificationMode, bool bypassMasking = false);
144  Q_INVOKABLE virtual void modifySegmentByLabelmap(vtkMRMLSegmentationNode* segmentationNode, const char* segmentID,
145  vtkOrientedImageData* modifierLabelmap, ModificationMode modificationMode, const int modificationExtent[6], bool bypassMasking = false);
146 
150  Q_INVOKABLE static void applyImageMask(vtkOrientedImageData* input, vtkOrientedImageData* mask, double fillValue, bool notMask = false);
151 
154  virtual void setupOptionsFrame() { };
155 
157  virtual QCursor createCursor(qMRMLWidget* viewWidget);
158 
164  virtual bool processInteractionEvents(vtkRenderWindowInteractor* callerInteractor, unsigned long eid, qMRMLWidget* viewWidget)
165  { Q_UNUSED(callerInteractor); Q_UNUSED(eid); Q_UNUSED(viewWidget); return false; };
166 
171  virtual void processViewNodeEvents(vtkMRMLAbstractViewNode* callerViewNode, unsigned long eid, qMRMLWidget* viewWidget)
172  { Q_UNUSED(callerViewNode); Q_UNUSED(eid); Q_UNUSED(viewWidget); };
173 
176  virtual void setMRMLDefaults() = 0;
177 
180  virtual void referenceGeometryChanged() { };
183  virtual void masterVolumeNodeChanged() { };
185  virtual void layoutChanged() { };
188  virtual void interactionNodeModified(vtkMRMLInteractionNode* interactionNode);
189 
190 public slots:
193  virtual void updateGUIFromMRML() = 0;
194 
197  virtual void updateMRMLFromGUI() = 0;
198 
199 // Get/set methods
200 public:
202  Q_INVOKABLE vtkMRMLSegmentEditorNode* parameterSetNode();
204  Q_INVOKABLE void setParameterSetNode(vtkMRMLSegmentEditorNode* node);
205 
207  Q_INVOKABLE vtkMRMLScene* scene();
208 
210  Q_INVOKABLE QFrame* optionsFrame();
211 
213  Q_INVOKABLE QFormLayout* optionsLayout();
214 
217  Q_INVOKABLE void addActor2D(qMRMLWidget* viewWidget, vtkActor2D* actor);
218 
220  Q_INVOKABLE void removeActor2D(qMRMLWidget* viewWidget, vtkActor2D* actor);
221 
224  Q_INVOKABLE void addActor3D(qMRMLWidget* viewWidget, vtkProp3D* actor);
225 
227  Q_INVOKABLE void removeActor3D(qMRMLWidget* viewWidget, vtkProp3D* actor);
228 
232  Q_INVOKABLE void addOptionsWidget(QWidget* newOptionsWidget);
233  Q_INVOKABLE void addOptionsWidget(QLayout* newOptionsWidget);
234 
235  Q_INVOKABLE QWidget* addLabeledOptionsWidget(QString label, QWidget* newOptionsWidget);
236  Q_INVOKABLE QWidget* addLabeledOptionsWidget(QString label, QLayout* newOptionsWidget);
237 
239  virtual QString name()const;
242  virtual void setName(QString name);
243 
245  virtual bool perSegment()const;
248  virtual void setPerSegment(bool perSegment);
249 
251  virtual bool requireSegments()const;
253  virtual void setRequireSegments(bool requireSegments);
254 
255 
257  Q_INVOKABLE void cursorOff(qMRMLWidget* viewWidget);
259  Q_INVOKABLE void cursorOn(qMRMLWidget* viewWidget);
260 
263  Q_INVOKABLE void selectEffect(QString effectName);
264 
269  void setCallbackSlots(QObject* receiver, const char* selectEffectSlot, const char* updateVolumeSlot, const char* saveStateForUndoSlot);
270 
272  void setVolumes(vtkOrientedImageData* alignedMasterVolume, vtkOrientedImageData* modifierLabelmap,
273  vtkOrientedImageData* maskLabelmap, vtkOrientedImageData* selectedSegmentLabelmap, vtkOrientedImageData* referenceGeometryImage);
274 
275 // Effect parameter functions
276 public:
278  Q_INVOKABLE QString parameter(QString name);
279 
281  Q_INVOKABLE int integerParameter(QString name);
282 
284  Q_INVOKABLE double doubleParameter(QString name);
285 
289  Q_INVOKABLE void setParameter(QString name, QString value);
292  Q_INVOKABLE void setParameterDefault(QString name, QString value);
299  Q_INVOKABLE void setCommonParameter(QString name, QString value);
302  Q_INVOKABLE void setCommonParameterDefault(QString name, QString value);
303 
307  Q_INVOKABLE void setParameter(QString name, int value);
310  Q_INVOKABLE void setParameterDefault(QString name, int value);
312  Q_INVOKABLE void setCommonParameter(QString name, int value);
315  Q_INVOKABLE void setCommonParameterDefault(QString name, int value);
316 
320  Q_INVOKABLE void setParameter(QString name, double value);
323  Q_INVOKABLE void setParameterDefault(QString name, double value);
325  Q_INVOKABLE void setCommonParameter(QString name, double value);
328  Q_INVOKABLE void setCommonParameterDefault(QString name, double value);
329 
330 // Utility functions
331 public:
333  Q_INVOKABLE bool parameterDefined(QString name);
334 
336  Q_INVOKABLE bool commonParameterDefined(QString name);
337 
343  Q_INVOKABLE int confirmCurrentSegmentVisible();
344 
345  Q_INVOKABLE vtkOrientedImageData* modifierLabelmap();
346 
349  Q_INVOKABLE vtkOrientedImageData* defaultModifierLabelmap();
350 
351  Q_INVOKABLE vtkOrientedImageData* maskLabelmap();
352 
353  Q_INVOKABLE vtkOrientedImageData* selectedSegmentLabelmap();
354 
355  Q_INVOKABLE vtkOrientedImageData* referenceGeometryImage();
356 
357  void setShowEffectCursorInSliceView(bool show);
358  void setShowEffectCursorInThreeDView(bool show);
359 
360  bool showEffectCursorInSliceView();
361  bool showEffectCursorInThreeDView();
362 
365  Q_INVOKABLE vtkOrientedImageData* masterVolumeImageData();
366 
369  Q_INVOKABLE void saveStateForUndo();
370 
372  Q_INVOKABLE static vtkRenderWindow* renderWindow(qMRMLWidget* viewWidget);
374  Q_INVOKABLE static vtkRenderer* renderer(qMRMLWidget* viewWidget);
376  Q_INVOKABLE static vtkMRMLAbstractViewNode* viewNode(qMRMLWidget* viewWidget);
377 
379  static QPoint rasToXy(double ras[3], qMRMLSliceWidget* sliceWidget);
381  Q_INVOKABLE static QPoint rasToXy(QVector3D ras, qMRMLSliceWidget* sliceWidget);
386  static void xyzToRas(double inputXyz[3], double outputRas[3], qMRMLSliceWidget* sliceWidget);
388  Q_INVOKABLE static QVector3D xyzToRas(QVector3D inputXyz, qMRMLSliceWidget* sliceWidget);
390  static void xyToRas(QPoint xy, double outputRas[3], qMRMLSliceWidget* sliceWidget);
392  static void xyToRas(double xy[2], double outputRas[3], qMRMLSliceWidget* sliceWidget);
394  Q_INVOKABLE static QVector3D xyToRas(QPoint xy, qMRMLSliceWidget* sliceWidget);
396  static void xyzToIjk(double inputXyz[3], int outputIjk[3], qMRMLSliceWidget* sliceWidget, vtkOrientedImageData* image, vtkMRMLTransformNode* parentTransform = nullptr);
398  Q_INVOKABLE static QVector3D xyzToIjk(QVector3D inputXyz, qMRMLSliceWidget* sliceWidget, vtkOrientedImageData* image, vtkMRMLTransformNode* parentTransform = nullptr);
400  static void xyToIjk(QPoint xy, int outputIjk[3], qMRMLSliceWidget* sliceWidget, vtkOrientedImageData* image, vtkMRMLTransformNode* parentTransform = nullptr);
402  static void xyToIjk(double xy[2], int outputIjk[3], qMRMLSliceWidget* sliceWidget, vtkOrientedImageData* image, vtkMRMLTransformNode* parentTransform = nullptr);
404  Q_INVOKABLE static QVector3D xyToIjk(QPoint xy, qMRMLSliceWidget* sliceWidget, vtkOrientedImageData* image, vtkMRMLTransformNode* parentTransform = nullptr);
405 
406  Q_INVOKABLE static void forceRender(qMRMLWidget* viewWidget);
407  Q_INVOKABLE static void scheduleRender(qMRMLWidget* viewWidget);
408 
409  Q_INVOKABLE static double sliceSpacing(qMRMLSliceWidget* sliceWidget);
410 
411  Q_INVOKABLE bool segmentationDisplayableInView(vtkMRMLAbstractViewNode* viewNode);
412 
413 protected:
415  QString m_Name;
416  bool m_Active{false};
417 
422  bool m_PerSegment{true};
423 
424  bool m_RequireSegments{true};
425 
426  bool m_ShowEffectCursorInSliceView{true};
427  bool m_ShowEffectCursorInThreeDView{false};
428 
429  double m_FillValue{1.0};
430  double m_EraseValue{0.0};
431 
434  vtkWeakPointer<vtkSegment> m_AlreadyConfirmedSegmentVisible;
435 
436 protected:
437  QScopedPointer<qSlicerSegmentEditorAbstractEffectPrivate> d_ptr;
438 
439 private:
440  Q_DECLARE_PRIVATE(qSlicerSegmentEditorAbstractEffect);
441  Q_DISABLE_COPY(qSlicerSegmentEditorAbstractEffect);
442 };
443 
444 #endif
This class encapsulates a segment that is part of a segmentation.
Definition: vtkSegment.h:45
vtkWeakPointer< vtkSegment > m_AlreadyConfirmedSegmentVisible
MRML node for representing a transformation between this node space and a parent node space...
virtual bool processInteractionEvents(vtkRenderWindowInteractor *callerInteractor, unsigned long eid, qMRMLWidget *viewWidget)
virtual Q_INVOKABLE const QString helpText() const
Get help text for effect to be displayed in the help box.
Abstract class for segment editor effects.
Image data containing orientation information.
Abstract MRML node to represent a view. The class holds the properties common to any view type (3D...
A set of MRML Nodes that supports serialization and undo/redo.
Definition: vtkMRMLScene.h:61
Parameter set node for the segment editor widget.
Base class for any widget that requires a MRML Scene.
Definition: qMRMLWidget.h:35
QScopedPointer< qSlicerSegmentEditorAbstractEffectPrivate > d_ptr
virtual void processViewNodeEvents(vtkMRMLAbstractViewNode *callerViewNode, unsigned long eid, qMRMLWidget *viewWidget)
virtual QIcon icon()
Get icon for effect to be displayed in segment editor.
virtual void layoutChanged()
Simple mechanism to let the effects know that the layout has changed.
MRML node containing segmentationsSegmentation node stores a set of segments (also known as contours ...