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qMRMLSegmentEditorWidget.h
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1/*==============================================================================
2
3 Program: 3D Slicer
4
5 Copyright (c) Laboratory for Percutaneous Surgery (PerkLab)
6 Queen's University, Kingston, ON, Canada. All Rights Reserved.
7
8 See COPYRIGHT.txt
9 or http://www.slicer.org/copyright/copyright.txt for details.
10
11 Unless required by applicable law or agreed to in writing, software
12 distributed under the License is distributed on an "AS IS" BASIS,
13 WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
14 See the License for the specific language governing permissions and
15 limitations under the License.
16
17 This file was originally developed by Csaba Pinter, PerkLab, Queen's University
18 and was supported through the Applied Cancer Research Unit program of Cancer Care
19 Ontario with funds provided by the Ontario Ministry of Health and Long-Term Care
20
21==============================================================================*/
22
23#ifndef __qMRMLSegmentEditorWidget_h
24#define __qMRMLSegmentEditorWidget_h
25
26// Segmentations includes
27#include "qSlicerSegmentationsModuleWidgetsExport.h"
28
29// MRMLWidgets includes
30#include "qMRMLWidget.h"
31
32// Qt includes
33#include <QVariant>
34
35// CTK includes
36#include <ctkVTKObject.h>
37
38// STD includes
39#include <cstdlib>
40
41class vtkMRMLNode;
46class vtkObject;
47class QItemSelection;
48class QAbstractButton;
49class qMRMLSegmentEditorWidgetPrivate;
52
64class Q_SLICER_MODULE_SEGMENTATIONS_WIDGETS_EXPORT qMRMLSegmentEditorWidget : public qMRMLWidget
65{
66 Q_OBJECT
67 QVTK_OBJECT
78 Q_PROPERTY(bool undoEnabled READ undoEnabled WRITE setUndoEnabled)
80 Q_PROPERTY(bool readOnly READ readOnly WRITE setReadOnly)
81 Q_PROPERTY(Qt::ToolButtonStyle effectButtonStyle READ effectButtonStyle WRITE setEffectButtonStyle)
87
88public:
91 explicit qMRMLSegmentEditorWidget(QWidget* parent = nullptr);
94
97
99 Q_INVOKABLE vtkMRMLNode* segmentationNode()const;
101 Q_INVOKABLE QString segmentationNodeID()const;
103 Q_INVOKABLE vtkMRMLNode* sourceVolumeNode()const;
105 Q_INVOKABLE QString sourceVolumeNodeID()const;
106
108 Q_INVOKABLE vtkMRMLNode* masterVolumeNode()const
109 {
110 qWarning("qMRMLSegmentEditorWidget::masterVolumeNode is deprecated, use sourceVolumeNode() method instead.");
111 return this->sourceVolumeNode();
112 };
113
114 Q_INVOKABLE QString masterVolumeNodeID()const
115 {
116 qWarning("qMRMLSegmentEditorWidget::masterVolumeNodeID is deprecated, use sourceVolumeNodeID() method instead.");
117 return this->sourceVolumeNodeID();
118 };
119
120 Q_INVOKABLE QString currentSegmentID()const;
121
128
132
134 Q_INVOKABLE QStringList availableEffectNames();
135
138 Q_INVOKABLE void setEffectNameOrder(const QStringList& effectNames);
139
143 Q_INVOKABLE QStringList effectNameOrder() const;
144
148 void setUnorderedEffectsVisible(bool visible);
149
153
156 Q_INVOKABLE int effectCount();
157
161
166 Q_INVOKABLE void setupViewObservations();
167
171 Q_INVOKABLE void removeViewObservations();
172
181
184 {
185 qWarning("qMRMLSegmentEditorWidget::masterVolumeNodeSelectorVisible is deprecated, use sourceVolumeNodeSelectorVisible() method instead.");
186 return this->sourceVolumeNodeSelectorVisible();
187 };
188
190 {
191 qWarning("qMRMLSegmentEditorWidget::autoShowMasterVolumeNode is deprecated, use autoShowSourceVolumeNode() method instead.");
192 return this->autoShowSourceVolumeNode();
193 };
194
197
200
203
206
210 bool undoEnabled() const;
214 bool readOnly() const;
215
218 Qt::ToolButtonStyle effectButtonStyle() const;
219
222 int effectColumnCount() const;
223
226 Q_INVOKABLE void segmentationNodeSelectorAddAttribute(const QString& nodeType,
227 const QString& attributeName,
228 const QVariant& attributeValue = QVariant());
231 Q_INVOKABLE void segmentationNodeSelectorRemoveAttribute(const QString& nodeType,
232 const QString& attributeName);
233
236 Q_INVOKABLE void sourceVolumeNodeSelectorAddAttribute(const QString& nodeType,
237 const QString& attributeName,
238 const QVariant& attributeValue = QVariant());
241 Q_INVOKABLE void sourceVolumeNodeSelectorRemoveAttribute(const QString& nodeType,
242 const QString& attributeName);
243
245 Q_INVOKABLE void masterVolumeNodeSelectorAddAttribute(const QString& nodeType,
246 const QString& attributeName,
247 const QVariant& attributeValue = QVariant())
248 {
249 qWarning("qMRMLSegmentEditorWidget::masterVolumeNodeSelectorAddAttribute is deprecated, use sourceVolumeNodeSelectorAddAttribute method instead.");
250 this->sourceVolumeNodeSelectorAddAttribute(nodeType, attributeName, attributeValue);
251 }
252
253 Q_INVOKABLE void masterVolumeNodeSelectorRemoveAttribute(const QString& nodeType,
254 const QString& attributeName)
255 {
256 qWarning("qMRMLSegmentEditorWidget::masterVolumeNodeSelectorRemoveAttribute is deprecated,"
257 " use sourceVolumeNodeSelectorRemoveAttribute instead.");
258 this->sourceVolumeNodeSelectorRemoveAttribute(nodeType, attributeName);
259 }
260
264
273 void setDefaultTerminologyEntrySettingsKey(const QString& terminologyEntrySettingsKey);
277
280 void setDefaultTerminologyEntry(const QString& terminologyEntry);
284
287
288public slots:
290 void setMRMLScene(vtkMRMLScene* newScene) override;
291
294
296 virtual void updateWidgetFromMRML();
297
301 void setSegmentationNodeID(const QString& nodeID);
307 void setSourceVolumeNodeID(const QString& nodeID);
308
311 {
312 qWarning("qMRMLSegmentEditorWidget::setMasterVolumeNode is deprecated, use setSourceVolumeNode method instead.");
313 this->setSourceVolumeNode(node);
314 }
315
316 void setMasterVolumeNodeID(const QString& nodeID)
317 {
318 qWarning("qMRMLSegmentEditorWidget::setMasterVolumeNodeID is deprecated, use setSourceVolumeNodeID method instead.");
319 this->setSourceVolumeNodeID(nodeID);
320 }
321
323 void setCurrentSegmentID(const QString segmentID);
324
326 void setActiveEffectByName(QString effectName);
327
331
333 void updateVolume(void* volumePtr, bool& success);
334
358 void setUndoEnabled(bool);
362 void setReadOnly(bool aReadOnly);
365
368 {
369 qWarning("qMRMLSegmentEditorWidget::setMasterVolumeNodeSelectorVisible is deprecated, use setSourceVolumeNodeSelectorVisible method instead.");
371 }
372
373 void setAutoShowMasterVolumeNode(bool autoShow)
374 {
375 qWarning("qMRMLSegmentEditorWidget::setAutoShowMasterVolumeNode is deprecated, use setAutoShowSourceVolumeNode method instead.");
376 this->setAutoShowSourceVolumeNode(autoShow);
377 }
378
380 {
381 qWarning("qMRMLSegmentEditorWidget::toggleMasterVolumeIntensityMaskEnabled is deprecated, use toggleSourceVolumeIntensityMaskEnabled method instead.");
383 }
384
386 void undo();
387
389 void redo();
390
394 void installKeyboardShortcuts(QWidget* parent = nullptr);
395
398
403
406
409 void setEffectButtonStyle(Qt::ToolButtonStyle toolButtonStyle);
410
412 void setEffectColumnCount(int columnCount);
413
418
423 void showSourceVolumeInSliceViewers(bool forceShowInBackground = false, bool fitSlice = false);
424
425 // Deprecated. Use showSourceVolumeInSliceViewers method instead.
426 void showMasterVolumeInSliceViewers(bool forceShowInBackground = false, bool fitSlice = false)
427 {
428 qWarning("qMRMLSegmentEditorWidget::showMasterVolumeInSliceViewers is deprecated, use showSourceVolumeInSliceViewers method instead.");
429 this->showSourceVolumeInSliceViewers(forceShowInBackground, fitSlice);
430 }
431
435
439
442
445
449 void selectSegmentAtOffset (int offset);
450
454
457
458signals:
460 void currentSegmentIDChanged(const QString&);
461
465
468
472
473protected slots:
479 void onSegmentSelectionChanged(const QItemSelection &selected, const QItemSelection &deselected);
480
483
485 void onEffectButtonClicked(QAbstractButton* button);
486
491
494
508 void onLayoutChanged(int layoutIndex);
511
514
518 void onSourceVolumeIntensityMaskRangeChanged(double low, double high);
519
522
525
528
531
534
537
544
547
550
553
554protected:
556 static void processEvents(vtkObject* caller, unsigned long eid, void* clientData, void* callData);
557
561
565
568
569protected:
570 QScopedPointer<qMRMLSegmentEditorWidgetPrivate> d_ptr;
571
572private:
573 Q_DECLARE_PRIVATE(qMRMLSegmentEditorWidget);
574 Q_DISABLE_COPY(qMRMLSegmentEditorWidget);
575};
576
577#endif
void setMasterVolumeNodeID(const QString &nodeID)
Deprecated. Use setSourceVolumeNodeID method instead.
int maximumNumberOfUndoStates() const
Get maximum number of saved undo/redo states.
void setMRMLScene(vtkMRMLScene *newScene) override
Set the MRML scene associated with the widget.
void onOverwriteModeChanged(int)
Changed selected overwritable segments.
void initializeParameterSetNode()
Set default parameters in parameter set node (after setting or closing scene)
void onMRMLSceneEndBatchProcessEvent()
Updates needed after batch processing is done.
int effectColumnCount() const
bool switchToSegmentationsButtonVisible() const
Show/hide the switch to Segmentations module button.
void updateWidgetFromSegmentationNode()
void setCurrentSegmentID(const QString segmentID)
Set selected segment by its ID.
QString defaultTerminologyEntry()
void updateVolume(void *volumePtr, bool &success)
Update modifierLabelmap, maskLabelmap, or alignedSourceVolumeNode.
bool maskingSectionVisible() const
Show/hide the masking section.
bool show3DButtonVisible() const
Show/hide the 3D button.
void setAddRemoveSegmentButtonsVisible(bool)
void setJumpToSelectedSegmentEnabled(bool enable)
Enables automatic jumping to current segment when selection is changed.
void toggleMasterVolumeIntensityMaskEnabled()
Deprecated. Use toggleSourceVolumeIntensityMaskEnabled method instead.
Q_INVOKABLE QString currentSegmentID() const
Get segment ID of selected segment.
bool specifyGeometryButtonVisible() const
Show/hide the specify geometry button.
void updateWidgetFromSourceVolumeNode()
void onSourceVolumeNodeChanged(vtkMRMLNode *node)
Handles changing of the current source volume MRML node.
void selectNextSegment()
Select the segment below the currently selected one in the table (skipping segments that are not visi...
Q_INVOKABLE QStringList effectNameOrder() const
void updateSliceRotateWarningButtonVisibility()
Show slice rotation warning button if slice views are rotated, hide otherwise.
void selectSegmentAtOffset(int offset)
QScopedPointer< qMRMLSegmentEditorWidgetPrivate > d_ptr
bool readOnly() const
Get whether widget is read-only.
void hideLabelLayer()
Unselect labelmap layer in all slice views in the active layout.
Q_INVOKABLE vtkMRMLNode * masterVolumeNode() const
Deprecated. Use sourceVolumeNode() method instead.
void setEffectColumnCount(int columnCount)
Request displaying effects in the grid layout with the specified column count.
void onSourceVolumeIntensityMaskChecked(bool checked)
Enable/disable threshold when checkbox is toggled.
void onSwitchToSegmentations()
Edit segmentation properties in Segmentations module.
Q_INVOKABLE void masterVolumeNodeSelectorRemoveAttribute(const QString &nodeType, const QString &attributeName)
Deprecated use sourceVolumeNodeSelectorRemoveAttribute method instead.
void setSourceVolumeNodeSelectorVisible(bool)
Show/hide the source volume node selector widget.
void setSourceVolumeNodeID(const QString &nodeID)
Set source volume MRML node by its ID.
void undo()
Restores previous saved state of the segmentation.
void onExportToFilesActionClicked()
Open Export to files dialog.
void onInteractionNodeModified()
Handles mouse mode changes (view / place markups)
void setSegmentationNodeSelectorVisible(bool)
Show/hide the segmentation node selector widget.
void segmentationNodeChanged(vtkMRMLSegmentationNode *)
bool jumpToSelectedSegmentEnabled() const
Returns true if automatic jump to current segment is enabled.
void redo()
Restores next saved state of the segmentation.
Q_INVOKABLE QStringList availableEffectNames()
Get list of all registered effect names that can be displayed in the widget.
QVTK_OBJECTbool segmentationNodeSelectorVisible
void setMasterVolumeNode(vtkMRMLNode *node)
Deprecated. Use setSourceVolumeNode method instead.
void setMasterVolumeNodeSelectorVisible(bool visible)
Deprecated. Use setSourceVolumeNodeSelectorVisible method instead.
void showSourceVolumeInSliceViewers(bool forceShowInBackground=false, bool fitSlice=false)
void onSegmentationHistoryChanged()
Update GUI if segmentation history is changed (e.g., undo/redo button states)
void setReadOnly(bool aReadOnly)
Set whether the widget is read-only.
void jumpSlices()
Segment's center is determined as the center of bounding box.
void onExportToColorTableActionClicked()
Export segment color and terminology information to a new color table.
bool setSourceRepresentationToBinaryLabelmap()
void sourceVolumeNodeChanged(vtkMRMLVolumeNode *)
bool undoEnabled() const
Undo/redo enabled.
void setMaskingSectionVisible(bool)
void setShow3DButtonVisible(bool)
bool sourceVolumeNodeSelectorVisible() const
Show/hide the source volume node selector widget.
void setSpecifyGeometryButtonVisible(bool)
void setActiveEffectByName(QString effectName)
Set active effect by name.
bool autoShowMasterVolumeNode() const
Deprecated. Use autoShowSourceVolumeNode() method instead.
void toggleSourceVolumeIntensityMaskEnabled()
Enable/disable masking using source volume intensity.
void onSelectSegmentShortcut()
Segment selection shortcut is activated.
void setUnorderedEffectsVisible(bool visible)
bool addRemoveSegmentButtonsVisible() const
Show/hide the add/remove segment buttons.
Q_INVOKABLE void sourceVolumeNodeSelectorAddAttribute(const QString &nodeType, const QString &attributeName, const QVariant &attributeValue=QVariant())
void onMRMLSceneEndCloseEvent()
Clean up when scene is closed.
bool segmentationNodeSelectorVisible() const
Show/hide the segmentation node selector widget.
Q_INVOKABLE void segmentationNodeSelectorAddAttribute(const QString &nodeType, const QString &attributeName, const QVariant &attributeValue=QVariant())
void onRemoveSegment()
Remove selected segment.
void onSourceVolumeImageDataModified()
Called if source volume image data is changed.
Q_INVOKABLE void setupViewObservations()
Q_INVOKABLE void segmentationNodeSelectorRemoveAttribute(const QString &nodeType, const QString &attributeName)
Q_INVOKABLE void removeViewObservations()
Q_INVOKABLE QString segmentationNodeID() const
Get ID of currently selected segmentation node.
void currentSegmentIDChanged(const QString &)
Emitted if different segment is selected in the segment list.
void setSwitchToSegmentationsButtonVisible(bool)
Show/hide the switch to Segmentations module button.
void updateMaskingSection()
Update masking section on the UI.
QString defaultTerminologyEntrySettingsKey() const
void onAddSegment()
Add empty segment.
Qt::ToolButtonStyle effectButtonStyle() const
bool autoShowSourceVolumeNode() const
void installKeyboardShortcuts(QWidget *parent=nullptr)
Q_INVOKABLE void sourceVolumeNodeSelectorRemoveAttribute(const QString &nodeType, const QString &attributeName)
void onEffectButtonClicked(QAbstractButton *button)
Activate effect on clicking its button.
Q_INVOKABLE vtkMRMLNode * segmentationNode() const
Get currently selected segmentation MRML node.
void setMRMLSegmentEditorNode(vtkMRMLSegmentEditorNode *newSegmentEditorNode)
Set the segment editor parameter set node.
void updateUndoRedoButtonsState()
Update undo/redo button states.
void selectPreviousSegment()
Select the segment above the currently selected one in the table (skipping segments that are not visi...
void onCreateSurfaceToggled(bool on)
Create/remove closed surface model for the segmentation that is automatically updated when editing.
void setSourceVolumeNode(vtkMRMLNode *node)
void uninstallKeyboardShortcuts()
Uninstall previously installed keyboard shortcuts.
void onSegmentationNodeChanged(vtkMRMLNode *node)
Handles changing of current segmentation MRML node.
void setInteractionNode(vtkMRMLInteractionNode *interactionNode)
virtual void updateWidgetFromMRML()
Update widget state from the MRML scene.
void setEffectButtonStyle(Qt::ToolButtonStyle toolButtonStyle)
bool masterVolumeNodeSelectorVisible() const
Deprecated. Use sourceVolumeNodeSelectorVisible() method instead.
Q_INVOKABLE QString masterVolumeNodeID() const
Deprecated. Use sourceVolumeNodeID() method instead.
bool unorderedEffectsVisible() const
void onLayoutChanged(int layoutIndex)
Handle layout changes.
void onSegmentSelectionChanged(const QItemSelection &selected, const QItemSelection &deselected)
Handles segment selection changes.
Q_INVOKABLE void setEffectNameOrder(const QStringList &effectNames)
void setAutoShowSourceVolumeNode(bool)
Q_INVOKABLE void masterVolumeNodeSelectorAddAttribute(const QString &nodeType, const QString &attributeName, const QVariant &attributeValue=QVariant())
Deprecated use sourceVolumeNodeSelectorAddAttribute method instead.
Q_INVOKABLE qSlicerSegmentEditorAbstractEffect * activeEffect() const
void setSegmentationNodeID(const QString &nodeID)
Set segmentation MRML node by its ID.
void setDefaultTerminologyEntrySettingsKey(const QString &terminologyEntrySettingsKey)
void onSegmentAddedRemoved()
Called if a segment or representation is added or removed.
void setMaximumNumberOfUndoStates(int)
Set maximum number of saved undo/redo states.
Q_INVOKABLE vtkMRMLSegmentEditorNode * mrmlSegmentEditorNode() const
Get the segment editor parameter set node.
Q_INVOKABLE qSlicerSegmentEditorAbstractEffect * effectByIndex(int index)
Q_INVOKABLE QString sourceVolumeNodeID() const
Get ID of currently selected source volume node.
Q_INVOKABLE qSlicerSegmentEditorAbstractEffect * effectByName(QString name)
void setUndoEnabled(bool)
Undo/redo enabled.
void setAutoShowMasterVolumeNode(bool autoShow)
Deprecated. Use setAutoShowSourceVolumeNode method instead.
void showSegmentationGeometryDialog()
Show segmentation geometry dialog to specify labelmap geometry.
void showMasterVolumeInSliceViewers(bool forceShowInBackground=false, bool fitSlice=false)
void onMaskModeChanged(int)
Changed selected editable segment area.
Q_INVOKABLE vtkMRMLInteractionNode * interactionNode() const
void setDefaultTerminologyEntry(const QString &terminologyEntry)
Q_INVOKABLE int effectCount()
Q_INVOKABLE void setActiveEffect(qSlicerSegmentEditorAbstractEffect *effect)
qSlicerAbstractModuleWidget * switchToSegmentationsModule()
Switches to Segmentations module and returns the module widget.
Qt::ToolButtonStyle effectButtonStyle
Q_INVOKABLE vtkMRMLNode * sourceVolumeNode() const
Get currently selected source volume MRML node.
void onSourceVolumeIntensityMaskRangeChanged(double low, double high)
Handles threshold values changed event.
void masterVolumeNodeChanged(vtkMRMLVolumeNode *)
Deprecated. Use sourceVolumeNodeChanged signal instead.
void onSegmentationDisplayModified()
Handle display node view ID changes.
static void processEvents(vtkObject *caller, unsigned long eid, void *clientData, void *callData)
Callback function invoked when interaction happens.
void setSegmentationNode(vtkMRMLNode *node)
Set segmentation MRML node.
void onImportExportActionClicked()
Switch to Segmentations module and jump to Import/Export section.
qMRMLSegmentEditorWidget(QWidget *parent=nullptr)
Constructor.
qMRMLWidget(QWidget *parent=nullptr, Qt::WindowFlags f=Qt::WindowFlags())
Abstract class for segment editor effects.
Abstract Superclass for all specific types of MRML nodes.
A set of MRML Nodes that supports serialization and undo/redo.
Parameter set node for the segment editor widget.
MRML node containing segmentations.
MRML node for representing a volume (image stack).