MRML node to represent an ROI markup. More...

#include <Libs/MRML/Core/vtkMRMLMarkupsROINode.h>

Inheritance diagram for vtkMRMLMarkupsROINode:

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Collaboration diagram for vtkMRMLMarkupsROINode:

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Public Types
enum	{ ROITypeBox , ROITypeBoundingBox , ROIType_Last }

typedef vtkMRMLMarkupsNode	Superclass

Public Types inherited from vtkMRMLMarkupsNode
enum	{ LockModifiedEvent = 19000 , LabelFormatModifiedEvent , PointAddedEvent , PointRemovedEvent , PointPositionDefinedEvent , PointPositionUndefinedEvent , PointPositionMissingEvent , PointPositionNonMissingEvent , PointModifiedEvent , PointStartInteractionEvent , PointEndInteractionEvent , CenterOfRotationModifiedEvent , FixedNumberOfControlPointsModifiedEvent , PointAboutToBeRemovedEvent }

enum	{ PositionUndefined , PositionPreview , PositionDefined , PositionMissing , PositionStatus_Last }
	Placement status of a control point. More...

typedef std::vector< ControlPoint * >	ControlPointsListType

typedef vtkMRMLDisplayableNode	Superclass

Public Types inherited from vtkMRMLDisplayableNode
enum	{ DisplayModifiedEvent = 17000 }

typedef vtkMRMLTransformableNode	Superclass

Public Types inherited from vtkMRMLTransformableNode
enum	{ TransformModifiedEvent = 15000 }
	TransformModifiedEvent is send when the parent transform is modified. More...

typedef vtkMRMLStorableNode	Superclass

Public Types inherited from vtkMRMLStorableNode
typedef vtkMRMLNode	Superclass

Public Types inherited from vtkMRMLNode
enum	{ HierarchyModifiedEvent = 16000 , IDChangedEvent = 16001 , ReferenceAddedEvent , ReferenceModifiedEvent , ReferenceRemovedEvent , ReferencedNodeModifiedEvent }

enum	ContentModifiedObserveType { ContentModifiedObserveUndefined = -1 , ContentModifiedObserveDisabled = 0 , ContentModifiedObserveEnabled = 1 }

typedef std::map< std::string, std::string >	ReferencePropertiesType
	Get the node reference properties for a specific referenceRole.

typedef vtkObject	Superclass

Public Member Functions
void	ApplyTransform (vtkAbstractTransform *transform) override
	Apply the passed transformation to the ROI.

virtual void	ApplyTransform (vtkAbstractTransform *transform, bool applyToLockedControlPoints)
	Apply the passed transformation to the ROI.

void	ApplyTransform (vtkAbstractTransform *transform, bool applyToLockedControlPoints) override

void	CreateDefaultDisplayNodes () override
	Create default display node or nullptr if does not have one.

vtkMRMLStorageNode *	CreateDefaultStorageNode () override
	Create default storage node or nullptr if does not have one.

vtkMRMLNode *	CreateNodeInstance () override
	MRMLNode methods.

VTK_NEWINSTANCE vtkPolyData *	CreateROIBoxPolyDataWorld ()

const char *	GetAddIcon () override

void	GetAxis (int axisIndex, double axis_Node[3])

void	GetAxisWorld (int axisIndex, double axis_World[3])

void	GetBounds (double bounds[6]) override

vtkVector3d	GetCenter ()

void	GetCenter (double center[3])
	Center of the ROI.

vtkVector3d	GetCenterWorld ()

void	GetCenterWorld (double center[3])

virtual const char *	GetClassName ()

const char *	GetIcon () override

virtual vtkImplicitFunction *	GetImplicitFunction ()
	Get the implicit function that represents the ROI in node coordinates.

vtkImplicitFunction *	GetImplicitFunctionWorld () override
	Get the implicit function that represents the ROI in world coordinates.

virtual bool	GetInsideOut ()

const char *	GetMarkupType () override
	Get markup type internal name.

const char *	GetNodeTagName () override
	Get node XML tag name (like Volume, Model)

void	GetObjectBounds (double bounds[6])

vtkMatrix4x4 *	GetObjectToNodeMatrix ()
	4x4 matrix defining the object center and axis directions within the node coordinate system.

vtkMatrix4x4 *	GetObjectToWorldMatrix ()

const char *	GetPlaceAddIcon () override

void	GetPlanes (vtkPlanes *planes)

void	GetPlanes (vtkPlanes *planes, bool insideOut)

void	GetPlanesWorld (vtkPlanes *planes)

void	GetPlanesWorld (vtkPlanes *planes, bool insideOut)

void	GetRadiusXYZ (double radiusXYZ[3])

void	GetRASBounds (double bounds[6]) override

virtual int	GetROIType ()

virtual double *	GetSize ()
	Length of the ROI sides.

virtual void	GetSize (double &, double &, double &)

virtual void	GetSize (double[3])

void	GetSizeWorld (double size_World[3])

void	GetTransformedPlanes (vtkPlanes *planes, bool insideOut=false)

void	GetXAxis (double axis_Node[3])

void	GetXAxisWorld (double axis_World[3])

bool	GetXYZ (double center[3])

void	GetYAxis (double axis_Node[3])

void	GetYAxisWorld (double axis_World[3])

void	GetZAxis (double axis_Node[3])

void	GetZAxisWorld (double axis_World[3])

virtual void	InsideOutOff ()

virtual void	InsideOutOn ()

virtual int	IsA (const char *type)

bool	IsPointInROI (double point_Node[3])
	Returns true if the specified point is within the ROI.

bool	IsPointInROIWorld (double point_World[3])

void	OnTransformNodeReferenceChanged (vtkMRMLTransformNode *transformNode) override
	Reimplemented to recalculate InteractionHandleToWorld matrix when parent transform is changed.

void	PrintSelf (ostream &os, vtkIndent indent) override
	Print out the node information to the output stream.

void	ProcessMRMLEvents (vtkObject caller, unsigned long event, void callData) override
	Alternative method to propagate events generated in Display nodes.

void	SetAndObserveObjectToNodeMatrix (vtkMatrix4x4 *objectToNodeMatrix)

void	SetCenter (const double center[3])

void	SetCenter (double x, double y, double z)

void	SetCenterWorld (const double center[3])

void	SetCenterWorld (double x, double y, double z)

void	SetInsideOut (bool insideOut)

void	SetRadiusXYZ (double radiusXYZ[3])

void	SetRadiusXYZ (double x, double y, double z)

void	SetROIType (int roiType)

void	SetSize (const double size[3])

void	SetSize (double x, double y, double z)

void	SetSizeWorld (const double size_World[3])

void	SetSizeWorld (double x_World, double y_World, double z_World)

int	SetXYZ (double center[3])

int	SetXYZ (double x, double y, double z)

virtual void	UpdateBoundingBoxROIFromControlPoints ()

virtual void	UpdateBoxROIFromControlPoints ()

virtual void	UpdateControlPointsFromBoundingBoxROI ()

virtual void	UpdateControlPointsFromBoxROI ()

virtual void	UpdateControlPointsFromROI ()
	Calculate the position of control points from the ROI.

void	UpdateInteractionHandleToWorldMatrix () override
	Update the InteractionHandleToWorldMatrix based on the ObjectToNode and NodeToWorld transforms.

virtual void	UpdateROIFromControlPoints ()
	Calculate the ROI dimensions from the control points.

	vtkMRMLCopyContentMacro (vtkMRMLMarkupsROINode)

void	WriteCLI (std::vector< std::string > &commandLine, std::string prefix, int coordinateSystem=vtkMRMLStorageNode::CoordinateSystemRAS, int multipleFlag=1) override

Public Member Functions inherited from vtkMRMLMarkupsNode
int	AddControlPoint (ControlPoint *controlPoint, bool autoLabel=true)

void	AddMeasurement (vtkMRMLMeasurement *measurement)

bool	CanApplyNonLinearTransforms () const override

void	ClearValueForAllMeasurements ()

bool	ControlPointExists (int n)
	Return true if n is a valid control point, false otherwise.

int	EndModify (int previousDisableModifiedEventState) override
	End modifying the node. Updates pending measurements and other updates.

vtkVector3d	GetCenterOfRotation ()

bool	GetCenterOfRotation (double point[3])

vtkVector3d	GetCenterOfRotationVector ()

bool	GetCenterOfRotationWorld (double worldxyz[3])

int	GetClosestControlPointIndexToPositionWorld (double pos[3], bool visibleOnly=false)

int	GetControlPointIndexFromInterpolatedPointIndex (vtkIdType interpolatedPointIndex)
	Converts curve point index to control point index.

void	GetControlPointLabels (vtkStringArray *labels)
	Get all control point labels at once.

virtual bool	GetControlPointPlacementComplete ()
	Returns true if no additional control points can be added to this node.

void	GetControlPointPositionsWorld (vtkPoints *points)
	Get a copy of all control point positions in world coordinate system.

std::vector< ControlPoint * > *	GetControlPoints ()
	Return a pointer to the std::vector of control points stored in this node.

virtual bool	GetCurveClosed ()
	Returns true if the curve generator creates a closed curve.

vtkParallelTransportFrame *	GetCurveCoordinateSystemGeneratorWorld ()

vtkCurveGenerator *	GetCurveGenerator ()

virtual const char *	GetDefaultNodeNamePrefix ()

virtual vtkMatrix4x4 *	GetInteractionHandleToWorldMatrix ()
	4x4 matrix detailing the orientation and position in world coordinates of the interaction handles.

std::string	GetMarkupLabelFormat ()

void	GetMarkupPoint (int markupIndex, int pointIndex, double point[3])

vtkVector3d	GetMarkupPointVector (int markupIndex, int)

vtkMRMLMarkupsDisplayNode *	GetMarkupsDisplayNode ()
	Return a cast display node, returns null if none.

virtual int	GetMaximumNumberOfControlPoints ()

vtkMRMLMeasurement *	GetMeasurement (const char *name)

bool	GetModifiedSinceRead () override

ControlPoint *	GetNthControlPoint (int n)
	Return a pointer to the Nth control point stored in this node, null if n is out of bounds.

ControlPoint *	GetNthControlPointByID (const char *controlPointID)
	Get the Nth control point based on it's ID.

std::string	GetNthControlPointID (int n)
	Get the id for the Nth control point.

int	GetNthControlPointIndexByID (const char *controlPointID)

int	GetNthControlPointIndexByPositionStatus (int pointIndex, int positionStatus)

bool	GetNthControlPointLocked (int n=0)

void	GetNthControlPointOrientation (int n, double orientationWXYZ[4])

vtkVector4d	GetNthControlPointOrientationVector (int pointIndex)

int	GetNthControlPointPositionStatus (int pointIndex)
	Get control point position status (PositionUndefined, PositionPreview, PositionDefined)

vtkVector3d	GetNthControlPointPositionVector (int pointIndex)

bool	GetNthControlPointPositionVisibility (int n=0)

bool	GetNthControlPointSelected (int n=0)

bool	GetNthControlPointVisibility (int n=0)

std::string	GetNthMarkupAssociatedNodeID (int n=0)

std::string	GetNthMarkupID (int n=0)

std::string	GetNthMarkupLabel (int n=0)

bool	GetNthMarkupLocked (int n=0)

vtkMRMLMeasurement *	GetNthMeasurement (int id)

int	GetNumberOfControlPoints ()
	Return the number of control points that are stored in this node.

int	GetNumberOfDefinedControlPoints (bool includePreview=false)
	Return the number of control points that are already placed (not being previewed or undefined).

int	GetNumberOfEnabledMeasurements ()

int	GetNumberOfMarkups ()

int	GetNumberOfMeasurements ()

int	GetNumberOfMovableControlPoints ()
	Return the number of unlocked control points with defined position in this node.

int	GetNumberOfPointsInNthMarkup (int)

int	GetNumberOfUndefinedControlPoints (bool includePreview=false)
	Return the number of control points that have not been placed (not being previewed or skipped).

virtual std::string	GetPropertiesLabelText ()

virtual int	GetRequiredNumberOfControlPoints ()

virtual const char *	GetTypeDisplayName () override

vtkMRMLUnitNode *	GetUnitNode (const char *quantity)
	Utility function to get unit node from scene.

bool	MarkupExists (int n)

void	PrintSelf (ostream &os, vtkIndent indent) override

void	ReadXMLAttributes (const char **atts) override
	Read node attributes from XML file.

virtual void	RemoveAllControlPoints ()
	Clear out the node of all control points.

void	RemoveAllMarkups ()

void	RemoveAllMeasurements ()

void	RemoveMarkup (int pointIndex)

void	RemoveNthControlPoint (int pointIndex)
	Remove Nth Control Point.

void	RemoveNthMeasurement (int id)

std::string	ReplaceListNameInControlPointLabelFormat ()

std::string	ReplaceListNameInMarkupLabelFormat ()

bool	ResetNthControlPointID (int n)

void	ResetNthControlPointPosition (int n)
	Set control point status to preview.

void	RestoreNthControlPointPosition (int n)
	Set control point status to defined and return to the previous position.

void	SetCenterOfRotationFromArray (const double pos[3])

void	SetCenterOfRotationFromPointer (const double *pos)

void	SetControlPointPositionsWorld (vtkPoints *points, bool setUndefinedPoints=true)

void	SetMarkupLabelFormat (std::string format)

void	SetNthControlPointLocked (int n, bool flag)

void	SetNthControlPointPositionFromArray (const int pointIndex, const double pos[3], int positionStatus=PositionDefined)

void	SetNthControlPointPositionFromPointer (const int pointIndex, const double *pos)

void	SetNthControlPointPositionMissing (int pointIndex)
	Set control point status to ignored.

void	SetNthControlPointPositionOrientationWorld (const int pointIndex, const double pos[3], const double orientationMatrix[9], const char *associatedNodeID, int positionStatus=PositionDefined)

void	SetNthControlPointPositionOrientationWorldFromArray (const int pointIndex, const double positionWorld[3], const double orientationMatrix_World[9], const char *associatedNodeID, int positionStatus=PositionDefined)

void	SetNthControlPointPositionWorldFromArray (const int pointIndex, const double pos[3], int positionStatus=PositionDefined)

void	SetNthControlPointSelected (int n, bool flag)

void	SetNthControlPointVisibility (int n, bool flag)

void	SetNthMarkupAssociatedNodeID (int n, std::string id)

void	SetNthMarkupLabel (int n, std::string label)

void	SetNthMarkupLocked (int n, bool flag)

void	SetNthMeasurement (int id, const std::string &name, double value, const std::string &units, std::string printFormat="", const std::string description="", vtkCodedEntry quantityCode=nullptr, vtkCodedEntry derivationCode=nullptr, vtkCodedEntry unitsCode=nullptr, vtkCodedEntry methodCode=nullptr)

void	SetNthMeasurement (int id, vtkMRMLMeasurement *measurement)

void	SwapControlPoints (int m1, int m2)
	Swap two control points (position data and all other properties).

virtual void	UnsetAllControlPoints ()

void	UnsetNthControlPointPosition (int pointIndex)
	Set control point status to undefined.

void	UpdateAllMeasurements ()

virtual void	UpdateAssignedAttribute ()

	vtkMRMLCopyContentMacro (vtkMRMLMarkupsNode)

void	WriteCLI (std::vector< std::string > &commandLine, std::string prefix, int coordinateSystem=vtkMRMLStorageNode::CoordinateSystemRAS, int multipleFlag=1) override

void	WriteXML (ostream &of, int indent) override
	Write this node's information to a MRML file in XML format.

virtual int	GetLocked ()

void	SetLocked (int locked)

virtual void	LockedOn ()

virtual void	LockedOff ()

int	AddNControlPoints (int n, std::string label=std::string(), vtkVector3d *point=nullptr)

int	AddNControlPoints (int n, std::string label, double point[3])

int	AddControlPoint (vtkVector3d point, std::string label=std::string())

int	AddControlPoint (double point[3], std::string label=std::string())

int	AddControlPoint (double x, double y, double z, std::string label=std::string())

int	AddControlPointWorld (vtkVector3d point, std::string label=std::string())

int	AddControlPointWorld (double point[3], std::string label=std::string())

int	AddControlPointWorld (double x, double y, double z, std::string label=std::string())

bool	InsertControlPoint (ControlPoint *controlPoint, int targetIndex)

bool	InsertControlPoint (int n, vtkVector3d point, std::string label=std::string())

bool	InsertControlPoint (int n, double point[3], std::string label=std::string())

bool	InsertControlPointWorld (int n, vtkVector3d pointWorld, std::string label=std::string())

bool	InsertControlPointWorld (int n, double pointWorld[3], std::string label=std::string())

bool	GetNthControlPointAutoCreated (int n)

void	SetNthControlPointAutoCreated (int n, bool flag)

void	GetNthControlPointPosition (int pointIndex, double point[3])

double *	GetNthControlPointPosition (int pointIndex) VTK_SIZEHINT(3)

int	GetNthControlPointPositionWorld (int pointIndex, double worldxyz[3])

vtkVector3d	GetNthControlPointPositionWorld (int pointIndex)

void	SetNthControlPointPosition (const int pointIndex, const double x, const double y, const double z, int positionStatus=PositionDefined)
	Set of the Nth control point position from coordinates.

void	SetNthControlPointPosition (const int pointIndex, const double position[3], int positionStatus=PositionDefined)

void	SetNthControlPointPositionWorld (const int pointIndex, const double x, const double y, const double z, int positionStatus=PositionDefined)

void	SetNthControlPointPositionWorld (const int pointIndex, const double position[3], int positionStatus=PositionDefined)

void	SetNthControlPointOrientation (int n, double w, double x, double y, double z)

void	SetNthControlPointOrientation (int n, const double wxyz[4])

double *	GetNthControlPointOrientationMatrix (int n) VTK_SIZEHINT(9)

void	SetNthControlPointOrientationMatrix (int n, double orientationMatrix[9])

void	GetNthControlPointOrientationMatrix (int n, vtkMatrix3x3 *matrix)

void	SetNthControlPointOrientationMatrix (int n, vtkMatrix3x3 *matrix)

void	GetNthControlPointOrientationMatrixWorld (int n, double orientationMatrix[9])

vtkVector< double, 9 >	GetNthControlPointOrientationMatrixWorld (int n)

void	SetNthControlPointOrientationMatrixWorld (int n, const double orientationMatrix[9])

void	GetNthControlPointOrientationMatrixWorld (int n, vtkMatrix3x3 *matrix)

void	SetNthControlPointOrientationMatrixWorld (int n, vtkMatrix3x3 *matrix)

void	SetCenterOfRotation (const double x, const double y, const double z)

void	SetCenterOfRotation (const double position[3])

void	SetCenterOfRotationWorld (const double x, const double y, const double z)

void	SetCenterOfRotationWorld (const double positionWorld[3])

void	GetNthControlPointNormal (int n, double normal[3])

vtkVector3d	GetNthControlPointNormal (int n)

void	GetNthControlPointNormalWorld (int n, double normalWorld[3])

vtkVector3d	GetNthControlPointNormalWorld (int n)

std::string	GetNthControlPointAssociatedNodeID (int n=0)

void	SetNthControlPointAssociatedNodeID (int n, std::string id)

int	GetControlPointIndexByID (const char *id)

int	GetControlPointIndexByLabel (const char *label)

int	GetControlPointIndexByDescription (const char *description)

std::string	GetNthControlPointLabel (int n=0)

void	SetNthControlPointLabel (int n, std::string label)

std::string	GetNthControlPointDescription (int n=0)

void	SetNthControlPointDescription (int n, std::string description)

std::string	GetControlPointLabelFormat ()

void	SetControlPointLabelFormat (std::string format)

bool	GetFixedNumberOfControlPoints ()

void	SetFixedNumberOfControlPoints (bool fixed)

virtual vtkPoints *	GetCurvePoints ()

virtual vtkPoints *	GetCurvePointsWorld ()

virtual vtkPolyData *	GetCurve ()

virtual vtkPolyData *	GetCurveWorld ()

virtual vtkAlgorithmOutput *	GetCurveWorldConnection ()

int	GetControlPointPlacementStartIndex ()

void	SetControlPointPlacementStartIndex (int)

virtual int	GetLastUsedControlPointNumber ()

virtual void	SetLastUsedControlPointNumber (int)

void	SetNthControlPointOrientationFromPointer (int n, const double *orientationWXYZ)

void	SetNthControlPointOrientationFromArray (int n, const double orientationWXYZ[4])

Public Member Functions inherited from vtkMRMLDisplayableNode
void	AddAndObserveDisplayNodeID (const char *displayNodeID)

void	Copy (vtkMRMLNode *node) override
	Copy the node's attributes to this object.

virtual void	CreateDefaultSequenceDisplayNodes ()

virtual int	GetDisplayClassVisibility (const char *nodeClass)

vtkMRMLDisplayNode *	GetDisplayNode ()

const char *	GetDisplayNodeID ()

virtual const char *	GetDisplayNodeReferenceRole ()

virtual int	GetDisplayVisibility ()

vtkMRMLDisplayNode *	GetNthDisplayNode (int n)

const char *	GetNthDisplayNodeID (int n)

int	GetNumberOfDisplayNodes ()

bool	HasDisplayNodeID (const char *displayNodeID)
	Return true if displayNodeID is in the display node ID list.

void	PrintSelf (ostream &os, vtkIndent indent) override

void	RemoveAllDisplayNodeIDs ()
	Remove all display node IDs and associated display nodes.

void	RemoveNthDisplayNodeID (int n)

void	SetAndObserveDisplayNodeID (const char *displayNodeID)

void	SetAndObserveNthDisplayNodeID (int n, const char *displayNodeID)

virtual void	SetDisplayClassVisibility (const char *nodeClass, int visible)

virtual void	SetDisplayVisibility (int visible)

void	SetSelectable (int) override

virtual void	WriteCLI (std::vector< std::string > &vtkNotUsed(commandLine), std::string vtkNotUsed(prefix), int vtkNotUsed(coordinateSystemFlag)=vtkMRMLStorageNode::CoordinateSystemRAS, int vtkNotUsed(multipleFlag)=1)

Public Member Functions inherited from vtkMRMLTransformableNode
virtual void	ApplyTransformMatrix (vtkMatrix4x4 *transformMatrix)

vtkMRMLTransformNode *	GetParentTransformNode ()
	Associated transform MRML node.

const char *	GetTransformNodeID ()
	Get referenced transform node id.

bool	HardenTransform ()

void	PrintSelf (ostream &os, vtkIndent indent) override

void	ProcessMRMLEvents (vtkObject , unsigned long, void ) override
	alternative method to propagate events generated in Transform nodes

void	ReadXMLAttributes (const char **atts) override
	Read node attributes from XML file.

bool	SetAndObserveTransformNodeID (const char *transformNodeID)

virtual void	TransformPointFromWorld (const double inWorld[3], double outLocal[3])

virtual void	TransformPointFromWorld (const vtkVector3d &inWorld, vtkVector3d &outLocal)

virtual void	TransformPointToWorld (const double inLocal[3], double outWorld[3])

virtual void	TransformPointToWorld (const vtkVector3d &inLocal, vtkVector3d &outWorld)

void	WriteXML (ostream &of, int indent) override
	Write this node's information to a MRML file in XML format.

Public Member Functions inherited from vtkMRMLStorableNode
void	AddAndObserveStorageNodeID (const char *storageNodeID)

virtual bool	AddDefaultStorageNode (const char *filename=nullptr)

void	Copy (vtkMRMLNode *node) override
	Copy node contents from another node of the same type. Reimplemented to copy default sequence storage node class.

virtual vtkMRMLStorageNode *	CreateDefaultSequenceStorageNode ()

virtual std::string	GetDefaultSequenceStorageNodeClassName ()

virtual std::string	GetDefaultStorageNodeClassName (const char *filename=nullptr)

vtkMRMLStorageNode *	GetNthStorageNode (int n)
	Get associated display MRML node.

const char *	GetNthStorageNodeID (int n)

int	GetNumberOfStorageNodes ()

const char *	GetSlicerDataType ()

vtkMRMLStorageNode *	GetStorageNode ()

const char *	GetStorageNodeID ()

virtual vtkTagTable *	GetUserTagTable ()
	Methods for user-specified metadata.

bool	HasStorageNodeID (const char *storageNodeID)
	Return true if storageNodeID is in the storage node ID list.

void	PrintSelf (ostream &os, vtkIndent indent) override

void	SetAndObserveNthStorageNodeID (int n, const char *storageNodeID)

void	SetAndObserveStorageNodeID (const char *storageNodeID)
	String ID of the storage MRML node.

virtual void	SetDefaultSequenceStorageNodeClassName (std::string)

void	SetSlicerDataType (const char *type)

virtual void	StorableModified ()

void	UpdateScene (vtkMRMLScene *scene) override
	Finds the storage node and read the data.

	vtkMRMLCopyContentMacro (vtkMRMLStorableNode)

Public Member Functions inherited from vtkMRMLNode
vtkMRMLNode *	AddAndObserveNodeReferenceID (const char referenceRole, const char referencedNodeID, vtkIntArray *events=nullptr, ContentModifiedObserveType observeContentModifiedEvents=ContentModifiedObserveUndefined)
	Add and observe a reference node from this node for a specific referenceRole.

vtkMRMLNode *	AddNodeReferenceID (const char referenceRole, const char referencedNodeID)
	Convenience method that adds a referencedNodeID at the end of the list.

void	AddNodeReferenceRole (const char referenceRole, const char mrmlAttributeName=nullptr, vtkIntArray *events=nullptr, bool observeContentModifiedEvents=false)
	Add a referenceRole.

virtual void	AddToSceneOff ()

virtual void	AddToSceneOn ()

void	ClearNodeReferenceProperties (const std::string &referenceRole)
	Remove all node reference properties for a specific referenceRole.

void	ClearNthNodeReferenceProperties (const std::string &referenceRole, int n)

virtual void	CopyContent (vtkMRMLNode *node, bool deepCopy=true)
	Copy node contents from another node of the same type. Does not copy node ID, Scene, Name, SingletonTag, HideFromEditors, AddToScene, UndoEnabled, and node references. If deepCopy is set to false then a shallow copy of bulk data (such as image or mesh data) could be made; copying may be faster but the node may share some data with the source node instead of creating an independent copy.

virtual void	CopyReferences (vtkMRMLNode *node)
	Copy the references of the node into this.

void	CopyWithScene (vtkMRMLNode *node)
	Copy everything (including Scene and ID) from another node of the same type.

void	DisableModifiedEventOff ()

void	DisableModifiedEventOn ()

virtual int	GetAddToScene ()
	node added to MRML scene.

const char *	GetAttribute (const char *name)
	Get value of a name value pair attribute.

std::vector< std::string >	GetAttributeNames ()
	Get all attribute names.

void	GetAttributeNames (vtkStringArray *attributeNames)
	Get all attribute names. Python-wrappable version.

virtual vtkIntArray *	GetContentModifiedEvents ()

int	GetCustomModifiedEventPending (int eventId)

virtual char *	GetDescription ()

virtual int	GetDisableModifiedEvent ()
	Turn on/off generating InvokeEvent for set macros.

virtual int	GetHideFromEditors ()
	Describes if the node is hidden.

virtual char *	GetID ()
	ID use by other nodes to reference this node in XML.

virtual int	GetInMRMLCallbackFlag ()
	Flags to avoid event loops.

virtual int	GetModifiedEventPending ()

virtual char *	GetName ()

vtkMRMLNode *	GetNodeReference (const char *referenceRole)

const char *	GetNodeReferenceID (const char *referenceRole)
	Utility function that returns the first node id for a specific referenceRole.

void	GetNodeReferenceIDs (const char referenceRole, std::vector< const char > &referencedNodeIDs)
	Return a list of the referenced node IDs.

const ReferencePropertiesType *	GetNodeReferenceProperties (const char *referenceRole)

std::string	GetNodeReferenceProperty (const std::string &referenceRole, const std::string &propertyName)
	Get the node reference property for a specific referenceRole.

std::string	GetNodeReferencePropertyName (const std::string &referenceRole, int propertyIndex)
	Get the name of the Nth node reference property for a specific referenceRole.

std::vector< std::string >	GetNodeReferencePropertyNames (const std::string &referenceRole)
	Get the names of all node reference properties for a specific referenceRole.

void	GetNodeReferenceRoles (std::vector< std::string > &roles)

void	GetNodeReferences (const char referenceRole, std::vector< vtkMRMLNode > &nodes)
	Return a list of the referenced nodes.

vtkMRMLNode *	GetNthNodeReference (const char *referenceRole, int n)
	Get referenced MRML node for a specific referenceRole.

const char *	GetNthNodeReferenceID (const char *referenceRole, int n)
	Return the string of the Nth node ID for a specific reference role.

const ReferencePropertiesType *	GetNthNodeReferenceProperties (const char *referenceRole, int n)

std::string	GetNthNodeReferenceProperty (const std::string &referenceRole, int n, const std::string &propertyName)

std::string	GetNthNodeReferencePropertyName (const std::string &referenceRole, int referenceIndex, int propertyIndex)

std::vector< std::string >	GetNthNodeReferencePropertyNames (const std::string &referenceRole, int n)

const char *	GetNthNodeReferenceRole (int n)

int	GetNumberOfNodeReferenceProperties (const std::string &referenceRole)
	Get the number of node reference properties for a specific referenceRole.

int	GetNumberOfNodeReferenceRoles ()

int	GetNumberOfNodeReferences (const char *referenceRole)
	Return the number of node IDs for a specific reference role (and nodes as they always have the same size).

int	GetNumberOfNthNodeReferenceProperties (const std::string &referenceRole, int n)

virtual int	GetSaveWithScene ()
	Save node with MRML scene.

virtual vtkMRMLScene *	GetScene ()
	Get the scene this node has been added to.

virtual int	GetSelectable ()
	Describes if the node is selectable.

virtual int	GetSelected ()
	Get/Set for Selected.

virtual char *	GetSingletonTag ()

virtual bool	GetUndoEnabled ()

virtual bool	HasCopyContent () const
	Returns true if the class supports deep and shallow copying node content.

bool	HasNodeReferenceID (const char referenceRole, const char referencedNodeID)
	Return true if referencedNodeID is in the node ID list for a specific referenceRole.

virtual void	HideFromEditorsOff ()

virtual void	HideFromEditorsOn ()

virtual void	InvokeCustomModifiedEvent (int eventId, void *callData=nullptr)
	This method allows the node to compress events.

virtual int	InvokePendingModifiedEvent ()
	Invokes any modified events that are `pending`.

bool	IsSingleton ()

void	Modified () override
	Customized version of Modified() allowing to compress vtkCommand::ModifiedEvent.

virtual void	OnNodeAddedToScene ()

void	PrintSelf (ostream &os, vtkIndent indent) override

virtual void	ProcessChildNode (vtkMRMLNode *)
	Set dependencies between this node and a child node when parsing XML file.

void	RemoveAttribute (const char *name)
	Remove attribute with the specified name.

void	RemoveNodeReferenceIDs (const char *referenceRole)
	Remove all node IDs and associated nodes for a specific referenceRole.

void	RemoveNodeReferenceProperty (const std::string &referenceRole, const std::string &propertyName)
	Remove a node reference property for a specific referenceRole.

void	RemoveNthNodeReferenceID (const char *referenceRole, int n)
	Convenience method that removes the Nth node ID from the list.

void	RemoveNthNodeReferenceProperty (const std::string &referenceRole, int n, const std::string &propertyName)

virtual void	Reset (vtkMRMLNode *defaultNode)
	Reset node attributes to the initial state as defined in the constructor or the passed default node.

virtual void	SaveWithSceneOff ()

virtual void	SaveWithSceneOn ()

virtual void	SelectableOff ()

virtual void	SelectableOn ()

virtual void	SelectedOff ()

virtual void	SelectedOn ()

virtual void	SetAddToScene (int)

void	SetAddToSceneNoModify (int value)

vtkMRMLNode *	SetAndObserveNodeReferenceID (const char referenceRole, const char referencedNodeID, vtkIntArray *events=nullptr, ContentModifiedObserveType observeContentModifiedEvents=ContentModifiedObserveUndefined)
	Set and observe a reference node from this node for a specific referenceRole.

vtkMRMLNode *	SetAndObserveNthNodeReferenceID (const char referenceRole, int n, const char referencedNodeID, vtkIntArray *events=nullptr, ContentModifiedObserveType observeContentModifiedEvents=ContentModifiedObserveUndefined)
	Set and observe the Nth node ID for a specific reference role.

void	SetAttribute (const char name, const char value)
	Set a name value pair attribute.

virtual void	SetDescription (const char *)
	Text description of this node, to be set by the user.

void	SetDisableModifiedEvent (int onOff)

virtual void	SetHideFromEditors (int)

void	SetInMRMLCallbackFlag (int flag)

virtual void	SetName (const char *)
	Name of this node, to be set by the user.

vtkMRMLNode *	SetNodeReferenceID (const char referenceRole, const char referencedNodeID)
	Set a reference to a node with specified nodeID from this node for a specific referenceRole.

void	SetNodeReferenceProperty (const std::string &referenceRole, const std::string &propertyName, const std::string &value)
	Set the node reference property for a specific referenceRole.

vtkMRMLNode *	SetNthNodeReferenceID (const char referenceRole, int n, const char referencedNodeID)
	Set a N-th reference from this node with specified referencedNodeID for a specific referenceRole.

void	SetNthNodeReferenceProperty (const std::string &referenceRole, int n, const std::string &propertyName, const std::string &value)

virtual void	SetSaveWithScene (int)

virtual void	SetScene (vtkMRMLScene *scene)
	This method is for internal use only. Use AddNode method of vtkMRMLScene to add a node to the scene.

virtual void	SetSceneReferences ()
	Update the references of the node to the scene.

virtual void	SetSelected (int)

void	SetSingletonOff ()

void	SetSingletonOn ()

virtual void	SetSingletonTag (const char *)
	Tag that make this node a singleton in the scene.

virtual void	SetUndoEnabled (bool)

virtual int	StartModify ()
	Start modifying the node. Disable Modify events.

virtual void	UndoEnabledOff ()

virtual void	UndoEnabledOn ()

virtual void	UpdateReferenceID (const char oldID, const char newID)
	Update the stored reference to another node in the scene.

virtual void	UpdateReferences ()
	The method should remove all pointers and observations to all nodes that are not in the scene anymore.

const char *	URLDecodeString (const char *inString)
	Decode a URL string.

const char *	URLEncodeString (const char *inString)
	Encode a URL string.

virtual void	WriteNodeBodyXML (ostream &of, int indent)
	Write this node's body to a MRML file in XML format.

std::string	XMLAttributeDecodeString (const std::string &inString)
	Decode an XML attribute string.

std::string	XMLAttributeEncodeString (const std::string &inString)
	Encode an XML attribute string (replaces special characters by code sequences)

Static Public Member Functions
static void	GenerateOrthogonalMatrix (double xAxis[3], double yAxis[3], double zAxis[3], double origin[3], vtkMatrix4x4 outputMatrix, vtkAbstractTransform transform=nullptr, bool applyScaling=true)

static void	GenerateOrthogonalMatrix (vtkMatrix4x4 inputMatrix, vtkMatrix4x4 outputMatrix, vtkAbstractTransform *transform=nullptr, bool applyScaling=true)

static const char *	GetROITypeAsString (int roiType)

static int	GetROITypeFromString (const char *roiType)

static int	IsTypeOf (const char *type)

static vtkMRMLMarkupsROINode *	New ()

static vtkMRMLMarkupsROINode *	SafeDownCast (vtkObject *o)

Static Public Member Functions inherited from vtkMRMLMarkupsNode
static const char *	GetPositionStatusAsString (int id)

static int	GetPositionStatusFromString (const char *name)

static int	IsTypeOf (const char *type)

static vtkMRMLMarkupsNode *	SafeDownCast (vtkObject *o)

static void	ConvertOrientationMatrixToWXYZ (const double orientationMatrix[9], double orientationWXYZ[4])

static void	ConvertOrientationWXYZToMatrix (const double orientationWXYZ[4], double orientationMatrix[9])

Static Public Member Functions inherited from vtkMRMLDisplayableNode
static int	IsTypeOf (const char *type)

static vtkMRMLDisplayableNode *	SafeDownCast (vtkObject *o)

Static Public Member Functions inherited from vtkMRMLTransformableNode
static int	IsTypeOf (const char *type)

static vtkMRMLTransformableNode *	SafeDownCast (vtkObject *o)

Static Public Member Functions inherited from vtkMRMLStorableNode
static int	IsTypeOf (const char *type)

static vtkMRMLStorableNode *	SafeDownCast (vtkObject *o)

Static Public Member Functions inherited from vtkMRMLNode
static int	IsTypeOf (const char *type)

static vtkMRMLNode *	SafeDownCast (vtkObject *o)

Protected Member Functions
void	GenerateBoxBounds (double bounds[6], double xAxis[3], double yAxis[3], double zAxis[3], double center[3], double size[3])
	Fills the specified vtkPoints with the points for all of the box ROI corners.

bool	GetObjectToNodeMatrixRotated ()

void	operator= (const vtkMRMLMarkupsROINode &)

void	UpdateImplicitFunction ()
	Updates the parameters of the internal implicit functions.

void	UpdateObjectToWorldMatrix ()
	Calculates the transform from the Object (ROI) to World coordinates.

	vtkMRMLMarkupsROINode ()

	vtkMRMLMarkupsROINode (const vtkMRMLMarkupsROINode &)

	~vtkMRMLMarkupsROINode () override

Protected Member Functions inherited from vtkMRMLMarkupsNode
std::string	GenerateControlPointLabel (int controlPointIndex)

std::string	GenerateUniqueControlPointID ()

ControlPoint *	GetNthControlPointCustomLog (int n, const char *failedMethodName)

void	operator= (const vtkMRMLMarkupsNode &)

bool	SetControlPointLabelsWorld (vtkStringArray labels, vtkPoints points, std::string separator="")

void	SetNthControlPointID (int n, std::string id)

virtual void	TransformOrientationMatrixFromNodeToWorld (const double position_Node[3], const double orientationMatrix_Node[9], double orientationMatrix_World[9])
	Transform the orientation matrix from node to world coordinates.

virtual void	TransformOrientationMatrixFromWorldToNode (const double position_World[3], const double orientationMatrix_World[9], double orientationMatrix_Node[9])
	Transform the orientation matrix from world to node coordinates.

virtual void	UpdateCurvePolyFromControlPoints ()

virtual void	UpdateMeasurementsInternal ()

	vtkMRMLMarkupsNode ()

	vtkMRMLMarkupsNode (const vtkMRMLMarkupsNode &)

virtual void	WriteMeasurementsToDescription ()

	~vtkMRMLMarkupsNode () override

Protected Member Functions inherited from vtkMRMLDisplayableNode
virtual const char *	GetDisplayNodeReferenceMRMLAttributeName ()

void	OnNodeReferenceAdded (vtkMRMLNodeReference *reference) override
	Called when a node reference ID is added (list size increased).

void	OnNodeReferenceModified (vtkMRMLNodeReference *reference) override
	Called when a node reference ID is modified.

void	OnNodeReferenceRemoved (vtkMRMLNodeReference *reference) override
	Called after a node reference ID is removed (list size decreased).

void	operator= (const vtkMRMLDisplayableNode &)

	vtkMRMLDisplayableNode ()

	vtkMRMLDisplayableNode (const vtkMRMLDisplayableNode &)

	~vtkMRMLDisplayableNode () override

Protected Member Functions inherited from vtkMRMLTransformableNode
virtual const char *	GetTransformNodeReferenceMRMLAttributeName ()

virtual const char *	GetTransformNodeReferenceRole ()

void	OnNodeReferenceAdded (vtkMRMLNodeReference *reference) override
	Called when a node reference ID is added (list size increased).

void	OnNodeReferenceModified (vtkMRMLNodeReference *reference) override
	Called when a node reference ID is modified.

void	OnNodeReferenceRemoved (vtkMRMLNodeReference *reference) override
	Called after a node reference ID is removed (list size decreased).

void	operator= (const vtkMRMLTransformableNode &)

	vtkMRMLTransformableNode ()

	vtkMRMLTransformableNode (const vtkMRMLTransformableNode &)

	~vtkMRMLTransformableNode () override

Protected Member Functions inherited from vtkMRMLStorableNode
virtual const char *	GetStorageNodeReferenceMRMLAttributeName ()

virtual const char *	GetStorageNodeReferenceRole ()

virtual vtkTimeStamp	GetStoredTime ()

void	operator= (const vtkMRMLStorableNode &)

	vtkMRMLStorableNode ()

	vtkMRMLStorableNode (const vtkMRMLStorableNode &)

	~vtkMRMLStorableNode () override

Protected Member Functions inherited from vtkMRMLNode
virtual const char *	GetMRMLAttributeNameFromReferenceRole (const char *refRole)
	Return the mrml attribute name (if found) associated with a reference role. Return 0 otherwise.

virtual const char *	GetReferenceRoleFromMRMLAttributeName (const char *attName)
	Return the reference role (if found) associated with the attribute name found in a MRML scene file. Return 0 otherwise.

virtual char *	GetTempURLString ()

void	GetUpdatedReferencedNodeEventList (int &oldReferencedNodeUseCount, int &newReferencedNodeUseCount, vtkIntArray oldConsolidatedEventList, vtkIntArray newConsolidatedEventList, vtkMRMLNode oldReferencedNode, vtkMRMLNode newReferencedNode, vtkMRMLNodeReference referenceToIgnore, vtkIntArray newEvents, bool newObserveContentModifiedEvents)

virtual void	InvalidateNodeReferences ()

virtual bool	IsReferenceRoleGeneric (const char *refRole)
	Return true if the reference role is generic (ends with '/') or false otherwise.

std::string	NodeReferencePropertyDecodeString (const std::string &inString)
	Decode a node reference property string.

std::string	NodeReferencePropertyEncodeString (const std::string &inString)
	Encode a node reference property string (replaces special characters by code sequences)

void	operator= (const vtkMRMLNode &)

void	ParseReferencesAttribute (const char *attValue, std::set< std::string > &references)

void	RemoveInvalidReferences (const std::set< std::string > &validNodeIDs)

virtual void	SetTempURLString (const char *)
	Get/Set the string used to manage encoding/decoding of strings/URLs with special characters.

vtkMRMLNode *	UpdateNodeReferenceEventObserver (vtkMRMLNode oldReferencedNode, vtkMRMLNode newReferencedNode, vtkIntArray newEvents, bool newObserveContentModifiedEvents, vtkMRMLNodeReference referenceToIgnore)

virtual void	UpdateNodeReferences (const char *referenceRole=nullptr)

virtual void	UpdateNthNodeReference (const char *referenceRole, int n)

	vtkMRMLNode ()

	vtkMRMLNode (const vtkMRMLNode &)

	~vtkMRMLNode () override
	critical to have a virtual destructor!

Protected Attributes
vtkSmartPointer< vtkImplicitFunction >	ImplicitFunction { nullptr }

vtkSmartPointer< vtkImplicitFunction >	ImplicitFunctionWorld { nullptr }

bool	InsideOut {false}

bool	IsUpdatingControlPointsFromROI {false}

bool	IsUpdatingInteractionHandleToWorldMatrix {false}

bool	IsUpdatingROIFromControlPoints {false}

vtkSmartPointer< vtkMatrix4x4 >	ObjectToNodeMatrix { nullptr }

vtkSmartPointer< vtkMatrix4x4 >	ObjectToWorldMatrix { nullptr }

int	ROIType {vtkMRMLMarkupsROINode::ROITypeBox}

double	Size [3] { 0.0, 0.0, 0.0 }

Protected Attributes inherited from vtkMRMLMarkupsNode
vtkVector3d	CenterOfRotation

std::string	ControlPointLabelFormat {"%N-%d"}

int	ControlPointPlacementStartIndex { -1 }
	Index of the control point index that placement is started from (if no other point is requested specifically).

ControlPointsListType	ControlPoints
	Vector of control points.

bool	CurveClosed {false}

vtkSmartPointer< vtkParallelTransportFrame >	CurveCoordinateSystemGeneratorWorld

vtkSmartPointer< vtkCurveGenerator >	CurveGenerator
	Converts curve control points to curve points.

vtkSmartPointer< vtkPolyData >	CurveInputPoly

vtkSmartPointer< vtkGeneralTransform >	CurvePolyToWorldTransform

vtkSmartPointer< vtkTransformPolyDataFilter >	CurvePolyToWorldTransformer

std::string	DefaultNodeNamePrefix
	Store markup short name. Translated to the application language.

bool	FixedNumberOfControlPoints {false}

vtkSmartPointer< vtkMatrix4x4 >	InteractionHandleToWorldMatrix
	Transform that moves the xyz unit vectors and origin of the interaction handles to local coordinates.

bool	IsUpdatingPoints {false}
	Flag set from SetControlPointPositionsWorld that pauses update of measurements until the update is complete.

int	LastUsedControlPointNumber {0}

int	Locked {0}
	Locks all the points and GUI.

int	MaximumNumberOfControlPoints {-1}

vtkCollection *	Measurements
	List of measurements stored for the markup.

std::string	PropertiesLabelText

int	RequiredNumberOfControlPoints {0}

vtkSmartPointer< vtkStringArray >	TextList

vtkSmartPointer< vtkPointLocator >	TransformedCurvePolyLocator

std::string	TypeDisplayName
	Store markup type GUI display name. Translated to the application language.

Protected Attributes inherited from vtkMRMLStorableNode
std::string	DefaultSequenceStorageNodeClassName

std::string	SlicerDataType

vtkTimeStamp	StorableModifiedTime

vtkTagTable *	UserTagTable

Protected Attributes inherited from vtkMRMLNode
int	AddToScene {1}

AttributesType	Attributes

vtkIntArray *	ContentModifiedEvents

char *	Description {nullptr}

int	HideFromEditors {0}

char *	ID {nullptr}

int	InMRMLCallbackFlag {0}
	Flag to avoid event loops.

vtkCallbackCommand *	MRMLCallbackCommand
	Holders for MRML callbacks.

vtkObserverManager *	MRMLObserverManager

char *	Name {nullptr}

NodeReferenceEventsType	NodeReferenceEvents

std::map< std::string, std::string >	NodeReferenceMRMLAttributeNames

NodeReferencesType	NodeReferences

int	SaveWithScene {true}

vtkWeakPointer< vtkMRMLScene >	Scene

int	Selectable {1}

int	Selected {0}

bool	UndoEnabled {false}

Additional Inherited Members
Protected Types inherited from vtkMRMLNode
typedef std::map< std::string, std::string >	AttributesType

typedef std::map< std::string, NodeReferenceEventList >	NodeReferenceEventsType

typedef std::vector< vtkSmartPointer< vtkMRMLNodeReference > >	NodeReferenceListType

typedef std::map< std::string, NodeReferenceListType >	NodeReferencesType

Static Protected Member Functions inherited from vtkMRMLNode
static void	MRMLCallback (vtkObject caller, unsigned long eid, void clientData, void *callData)

Static Protected Attributes inherited from vtkMRMLDisplayableNode
static const char *	DisplayNodeReferenceMRMLAttributeName

static const char *	DisplayNodeReferenceRole

Static Protected Attributes inherited from vtkMRMLTransformableNode
static const char *	TransformNodeReferenceMRMLAttributeName

static const char *	TransformNodeReferenceRole

Static Protected Attributes inherited from vtkMRMLStorableNode
static const char *	StorageNodeReferenceMRMLAttributeName

static const char *	StorageNodeReferenceRole

Detailed Description

MRML node to represent an ROI markup.

Coordinate systems used:

Object: Coordinate system that the ROI. Origin of the coordinate system is in the center of the ROI box. Axes of the coordinate system are aligned with the axes of the ROI box.
Node: Coordinate system of the markup node. Coordinates of the control points are stored in this coordinate system.
World: Patient coordinate system (RAS). Transform between Node and World coordinate systems are defined by the parent transform of the node.

Definition at line 56 of file vtkMRMLMarkupsROINode.h.

Member Typedef Documentation

◆ Superclass

typedef vtkMRMLMarkupsNode vtkMRMLMarkupsROINode::Superclass

Definition at line 60 of file vtkMRMLMarkupsROINode.h.

Member Enumeration Documentation

◆ anonymous enum

anonymous enum

Enumerator
ROITypeBox	Requires two Control points that are removed after they have been placed.
ROITypeBoundingBox	ROI forms a bounding box around the control points.
ROIType_Last

Definition at line 163 of file vtkMRMLMarkupsROINode.h.

Constructor & Destructor Documentation

◆ vtkMRMLMarkupsROINode() [1/2]

vtkMRMLMarkupsROINode::vtkMRMLMarkupsROINode ( )

protected

◆ ~vtkMRMLMarkupsROINode()

vtkMRMLMarkupsROINode::~vtkMRMLMarkupsROINode ( )

overrideprotected

◆ vtkMRMLMarkupsROINode() [2/2]

vtkMRMLMarkupsROINode::vtkMRMLMarkupsROINode ( const vtkMRMLMarkupsROINode & )

protected

Member Function Documentation

◆ ApplyTransform() [1/3]

void vtkMRMLMarkupsNode::ApplyTransform ( vtkAbstractTransform * transform )

overridevirtual

Apply the passed transformation to the ROI.

Reimplemented from vtkMRMLMarkupsNode.

◆ ApplyTransform() [2/3]

virtual void vtkMRMLMarkupsNode::ApplyTransform	(	vtkAbstractTransform *	transform,
		bool	applyToLockedControlPoints )

virtual

Apply the passed transformation to the ROI.

Reimplemented from vtkMRMLMarkupsNode.

◆ ApplyTransform() [3/3]

void vtkMRMLMarkupsROINode::ApplyTransform	(	vtkAbstractTransform *	transform,
		bool	applyToLockedControlPoints )

overridevirtual

Reimplemented from vtkMRMLMarkupsNode.

◆ CreateDefaultDisplayNodes()

void vtkMRMLMarkupsROINode::CreateDefaultDisplayNodes ( )

overridevirtual

Create default display node or nullptr if does not have one.

Reimplemented from vtkMRMLMarkupsNode.

◆ CreateDefaultStorageNode()

vtkMRMLStorageNode * vtkMRMLMarkupsROINode::CreateDefaultStorageNode ( )

overridevirtual

Create default storage node or nullptr if does not have one.

Reimplemented from vtkMRMLMarkupsNode.

◆ CreateNodeInstance()

vtkMRMLNode * vtkMRMLMarkupsROINode::CreateNodeInstance ( )

overridevirtual

MRMLNode methods.

Implements vtkMRMLDisplayableNode.

◆ CreateROIBoxPolyDataWorld()

VTK_NEWINSTANCE vtkPolyData * vtkMRMLMarkupsROINode::CreateROIBoxPolyDataWorld ( )

Create ROI box as surface mesh in the world coordinate system as a new vtkPolyData object. Only in C++: The caller must take ownership of the returned object.

◆ GenerateBoxBounds()

void vtkMRMLMarkupsROINode::GenerateBoxBounds	(	double	bounds[6],
		double	xAxis[3],
		double	yAxis[3],
		double	zAxis[3],
		double	center[3],
		double	size[3] )

protected

Fills the specified vtkPoints with the points for all of the box ROI corners.

◆ GenerateOrthogonalMatrix() [1/2]

static void vtkMRMLMarkupsROINode::GenerateOrthogonalMatrix	(	double	xAxis[3],
		double	yAxis[3],
		double	zAxis[3],
		double	origin[3],
		vtkMatrix4x4 *	outputMatrix,
		vtkAbstractTransform *	transform = nullptr,
		bool	applyScaling = true )

static

◆ GenerateOrthogonalMatrix() [2/2]

static void vtkMRMLMarkupsROINode::GenerateOrthogonalMatrix	(	vtkMatrix4x4 *	inputMatrix,
		vtkMatrix4x4 *	outputMatrix,
		vtkAbstractTransform *	transform = nullptr,
		bool	applyScaling = true )

static

Helper method for generating an orthogonal right handed matrix from axes. Transform can optionally be specified to apply an additional transform on the vectors before generating the matrix.

◆ GetAddIcon()

const char * vtkMRMLMarkupsROINode::GetAddIcon ( )

inlineoverridevirtual

Reimplemented from vtkMRMLMarkupsNode.

Definition at line 65 of file vtkMRMLMarkupsROINode.h.

◆ GetAxis()

void vtkMRMLMarkupsROINode::GetAxis	(	int	axisIndex,
		double	axis_Node[3] )

◆ GetAxisWorld()

void vtkMRMLMarkupsROINode::GetAxisWorld	(	int	axisIndex,
		double	axis_World[3] )

◆ GetBounds()

void vtkMRMLMarkupsROINode::GetBounds ( double bounds[6] )

overridevirtual

Get bounding box in global RAS form (xmin,xmax, ymin,ymax, zmin,zmax). This method always returns the bounds of the untransformed object.

See also: GetRASBounds()

Reimplemented from vtkMRMLMarkupsNode.

◆ GetCenter() [1/2]

vtkVector3d vtkMRMLMarkupsROINode::GetCenter ( )

◆ GetCenter() [2/2]

void vtkMRMLMarkupsROINode::GetCenter ( double center[3] )

Center of the ROI.

◆ GetCenterWorld() [1/2]

vtkVector3d vtkMRMLMarkupsROINode::GetCenterWorld ( )

◆ GetCenterWorld() [2/2]

void vtkMRMLMarkupsROINode::GetCenterWorld ( double center[3] )

◆ GetClassName()

virtual const char * vtkMRMLMarkupsROINode::GetClassName ( )

virtual

Reimplemented from vtkMRMLMarkupsNode.

◆ GetIcon()

const char * vtkMRMLMarkupsROINode::GetIcon ( )

inlineoverridevirtual

Reimplemented from vtkMRMLMarkupsNode.

Definition at line 64 of file vtkMRMLMarkupsROINode.h.

◆ GetImplicitFunction()

virtual vtkImplicitFunction * vtkMRMLMarkupsROINode::GetImplicitFunction ( )

virtual

Get the implicit function that represents the ROI in node coordinates.

◆ GetImplicitFunctionWorld()

vtkImplicitFunction * vtkMRMLMarkupsROINode::GetImplicitFunctionWorld ( )

inlineoverridevirtual

Get the implicit function that represents the ROI in world coordinates.

Reimplemented from vtkMRMLTransformableNode.

Definition at line 236 of file vtkMRMLMarkupsROINode.h.

◆ GetInsideOut()

virtual bool vtkMRMLMarkupsROINode::GetInsideOut ( )

virtual

◆ GetMarkupType()

const char * vtkMRMLMarkupsROINode::GetMarkupType ( )

inlineoverridevirtual

Get markup type internal name.

Reimplemented from vtkMRMLMarkupsNode.

Definition at line 78 of file vtkMRMLMarkupsROINode.h.

◆ GetNodeTagName()

const char * vtkMRMLMarkupsROINode::GetNodeTagName ( )

inlineoverridevirtual

Get node XML tag name (like Volume, Model)

Implements vtkMRMLDisplayableNode.

Definition at line 75 of file vtkMRMLMarkupsROINode.h.

◆ GetObjectBounds()

void vtkMRMLMarkupsROINode::GetObjectBounds ( double bounds[6] )

Get ROI bounds in Object coordinate system. The difference compared to GetBounds() is that the center of the ROI is the origin in the Object coordinate system.

◆ GetObjectToNodeMatrix()

vtkMatrix4x4 * vtkMRMLMarkupsROINode::GetObjectToNodeMatrix ( )

inline

4x4 matrix defining the object center and axis directions within the node coordinate system.

Definition at line 125 of file vtkMRMLMarkupsROINode.h.

◆ GetObjectToNodeMatrixRotated()

bool vtkMRMLMarkupsROINode::GetObjectToNodeMatrixRotated ( )

protected

◆ GetObjectToWorldMatrix()

vtkMatrix4x4 * vtkMRMLMarkupsROINode::GetObjectToWorldMatrix ( )

inline

4x4 matrix defining the object center and axis directions within the world coordinate system. The returned matrix must not be modified.

Definition at line 134 of file vtkMRMLMarkupsROINode.h.

◆ GetPlaceAddIcon()

const char * vtkMRMLMarkupsROINode::GetPlaceAddIcon ( )

inlineoverridevirtual

Reimplemented from vtkMRMLMarkupsNode.

Definition at line 66 of file vtkMRMLMarkupsROINode.h.

◆ GetPlanes() [1/2]

void vtkMRMLMarkupsROINode::GetPlanes ( vtkPlanes * planes )

inline

Returns the planes that define each of the 6 faces of the ROI. If InsideOut property of the node is true the normals of the plane will face inward, otherwise the plane normals face outward.

Parameters

planes Output planes object

Definition at line 204 of file vtkMRMLMarkupsROINode.h.

◆ GetPlanes() [2/2]

void vtkMRMLMarkupsROINode::GetPlanes	(	vtkPlanes *	planes,
		bool	insideOut )

Returns the planes that define each of the 6 faces of the ROI.

Parameters

insideOut Overrides the InsideOut node property of the node. If false the normals of the planes will face outward so that the inside is "in", if true the normals of the plane will face inward so that the inside is "out".

◆ GetPlanesWorld() [1/2]

void vtkMRMLMarkupsROINode::GetPlanesWorld ( vtkPlanes * planes )

inline

Definition at line 205 of file vtkMRMLMarkupsROINode.h.

◆ GetPlanesWorld() [2/2]

void vtkMRMLMarkupsROINode::GetPlanesWorld	(	vtkPlanes *	planes,
		bool	insideOut )

◆ GetRadiusXYZ()

void vtkMRMLMarkupsROINode::GetRadiusXYZ ( double radiusXYZ[3] )

◆ GetRASBounds()

void vtkMRMLMarkupsROINode::GetRASBounds ( double bounds[6] )

overridevirtual

Reimplemented to recalculate the axis-aligned bounds of the ROI. If the ROI is rotated, this function will not reflect the oriented bounds defined by the ROI. To get the planes that define the oriented bounding box, use GetPlanes()/GetPlanesWorld(). GetBounds/GetRASBounds will return the axis-aligned bounding box in node/world coordinates, while GetPlanes/GetPlanesWorld() will return the 6 planes that define the faces of the oriented bounding box.

See also: GetPlanes(), GetPlanesWorld()

Reimplemented from vtkMRMLMarkupsNode.

◆ GetROIType()

virtual int vtkMRMLMarkupsROINode::GetROIType ( )

virtual

ROIType represents the method that is used to calculate the size of the ROI. BOX ROI does not require control points to define a region, while the size of a BOUNDING_BOX ROI will be defined by the control points.

◆ GetROITypeAsString()

static const char * vtkMRMLMarkupsROINode::GetROITypeAsString ( int roiType )

static

◆ GetROITypeFromString()

static int vtkMRMLMarkupsROINode::GetROITypeFromString ( const char * roiType )

static

◆ GetSize() [1/3]

virtual double * vtkMRMLMarkupsROINode::GetSize ( )

virtual

Length of the ROI sides.

◆ GetSize() [2/3]

virtual void vtkMRMLMarkupsROINode::GetSize	(	double &	,
		double &	,
		double &	)

virtual

◆ GetSize() [3/3]

virtual void vtkMRMLMarkupsROINode::GetSize ( double [3] )

virtual

◆ GetSizeWorld()

void vtkMRMLMarkupsROINode::GetSizeWorld ( double size_World[3] )

◆ GetTransformedPlanes()

void vtkMRMLMarkupsROINode::GetTransformedPlanes	(	vtkPlanes *	planes,
		bool	insideOut = false )

Legacy method from vtkMRMLAnnotationROINode

See also: GetPlanes(), GetPlanesWorld(), vtkMRMLAnnotationROINode::GetTransformedPlanes()

◆ GetXAxis()

void vtkMRMLMarkupsROINode::GetXAxis ( double axis_Node[3] )

◆ GetXAxisWorld()

void vtkMRMLMarkupsROINode::GetXAxisWorld ( double axis_World[3] )

The directional axis of the ROI that are defined by ObjectToNodeMatrix.

See also: GetObjectToNodeMatrix()

◆ GetXYZ()

bool vtkMRMLMarkupsROINode::GetXYZ ( double center[3] )

◆ GetYAxis()

void vtkMRMLMarkupsROINode::GetYAxis ( double axis_Node[3] )

◆ GetYAxisWorld()

void vtkMRMLMarkupsROINode::GetYAxisWorld ( double axis_World[3] )

◆ GetZAxis()

void vtkMRMLMarkupsROINode::GetZAxis ( double axis_Node[3] )

◆ GetZAxisWorld()

void vtkMRMLMarkupsROINode::GetZAxisWorld ( double axis_World[3] )

◆ InsideOutOff()

virtual void vtkMRMLMarkupsROINode::InsideOutOff ( )

virtual

◆ InsideOutOn()

virtual void vtkMRMLMarkupsROINode::InsideOutOn ( )

virtual

◆ IsA()

virtual int vtkMRMLMarkupsROINode::IsA ( const char * type )

virtual

Reimplemented from vtkMRMLMarkupsNode.

◆ IsPointInROI()

bool vtkMRMLMarkupsROINode::IsPointInROI ( double point_Node[3] )

Returns true if the specified point is within the ROI.

◆ IsPointInROIWorld()

bool vtkMRMLMarkupsROINode::IsPointInROIWorld ( double point_World[3] )

◆ IsTypeOf()

static int vtkMRMLMarkupsROINode::IsTypeOf ( const char * type )

static

◆ New()

static vtkMRMLMarkupsROINode * vtkMRMLMarkupsROINode::New ( )

static

◆ OnTransformNodeReferenceChanged()

void vtkMRMLMarkupsROINode::OnTransformNodeReferenceChanged ( vtkMRMLTransformNode * transformNode )

overridevirtual

Reimplemented to recalculate InteractionHandleToWorld matrix when parent transform is changed.

Reimplemented from vtkMRMLMarkupsNode.

◆ operator=()

void vtkMRMLMarkupsROINode::operator= ( const vtkMRMLMarkupsROINode & )

protected

◆ PrintSelf()

void vtkMRMLMarkupsROINode::PrintSelf	(	ostream &	os,
		vtkIndent	indent )

override

Print out the node information to the output stream.

◆ ProcessMRMLEvents()

void vtkMRMLMarkupsROINode::ProcessMRMLEvents	(	vtkObject *	,
		unsigned long	,
		void *	)

overridevirtual

Alternative method to propagate events generated in Display nodes.

Reimplemented from vtkMRMLMarkupsNode.

◆ SafeDownCast()

static vtkMRMLMarkupsROINode * vtkMRMLMarkupsROINode::SafeDownCast ( vtkObject * o )

static

◆ SetAndObserveObjectToNodeMatrix()

void vtkMRMLMarkupsROINode::SetAndObserveObjectToNodeMatrix ( vtkMatrix4x4 * objectToNodeMatrix )

◆ SetCenter() [1/2]

void vtkMRMLMarkupsROINode::SetCenter ( const double center[3] )

◆ SetCenter() [2/2]

void vtkMRMLMarkupsROINode::SetCenter	(	double	x,
		double	y,
		double	z )

◆ SetCenterWorld() [1/2]

void vtkMRMLMarkupsROINode::SetCenterWorld ( const double center[3] )

◆ SetCenterWorld() [2/2]

void vtkMRMLMarkupsROINode::SetCenterWorld	(	double	x,
		double	y,
		double	z )

◆ SetInsideOut()

void vtkMRMLMarkupsROINode::SetInsideOut ( bool insideOut )

Get/Set the ROI inside out flag. Used for computing ImplicitFunction and bounding planes. It may be also used for rendering the ROI differently (e.g., filling inside or outside).

See also: GetImplicitFunction, GetImplicitFunctionWorld, GetPlanes

◆ SetRadiusXYZ() [1/2]

void vtkMRMLMarkupsROINode::SetRadiusXYZ ( double radiusXYZ[3] )

Legacy method from vtkMRMLAnnotationROINode Get/Set for radius of the ROI in RAS coordinates Old API: void SetRadiusXYZ(double RadiusX, double RadiusY, double RadiusZ); void SetRadiusXYZ(double* RadiusXYZ); vtkGetVectorMacro(RadiusXYZ,double,3);

See also: SetSize(), GetSize()

◆ SetRadiusXYZ() [2/2]

void vtkMRMLMarkupsROINode::SetRadiusXYZ	(	double	x,
		double	y,
		double	z )

◆ SetROIType()

void vtkMRMLMarkupsROINode::SetROIType ( int roiType )

◆ SetSize() [1/2]

void vtkMRMLMarkupsROINode::SetSize ( const double size[3] )

◆ SetSize() [2/2]

void vtkMRMLMarkupsROINode::SetSize	(	double	x,
		double	y,
		double	z )

◆ SetSizeWorld() [1/2]

void vtkMRMLMarkupsROINode::SetSizeWorld ( const double size_World[3] )

◆ SetSizeWorld() [2/2]

void vtkMRMLMarkupsROINode::SetSizeWorld	(	double	x_World,
		double	y_World,
		double	z_World )

◆ SetXYZ() [1/2]

int vtkMRMLMarkupsROINode::SetXYZ ( double center[3] )

Legacy vtkMRMLAnnotationROINode methods Legacy method from vtkMRMLAnnotationROINode Get/Set for ROI Position in RAS coordinates Note: The ROI Position is the center of the ROI Old API: void SetXYZ(double X, double Y, double Z); void SetXYZ(double* XYZ); vtkGetVectorMacro(XYZ,double,3); double* GetXYZ() {return this->GetControlPointCoordinates(0);}

See also: SetCenter(), GetCenter()

◆ SetXYZ() [2/2]

int vtkMRMLMarkupsROINode::SetXYZ	(	double	x,
		double	y,
		double	z )

◆ UpdateBoundingBoxROIFromControlPoints()

virtual void vtkMRMLMarkupsROINode::UpdateBoundingBoxROIFromControlPoints ( )

virtual

◆ UpdateBoxROIFromControlPoints()

virtual void vtkMRMLMarkupsROINode::UpdateBoxROIFromControlPoints ( )

virtual

◆ UpdateControlPointsFromBoundingBoxROI()

virtual void vtkMRMLMarkupsROINode::UpdateControlPointsFromBoundingBoxROI ( )

virtual

◆ UpdateControlPointsFromBoxROI()

virtual void vtkMRMLMarkupsROINode::UpdateControlPointsFromBoxROI ( )

virtual

◆ UpdateControlPointsFromROI()

virtual void vtkMRMLMarkupsROINode::UpdateControlPointsFromROI ( )

virtual

Calculate the position of control points from the ROI.

◆ UpdateImplicitFunction()

void vtkMRMLMarkupsROINode::UpdateImplicitFunction ( )

protected

Updates the parameters of the internal implicit functions.

◆ UpdateInteractionHandleToWorldMatrix()

void vtkMRMLMarkupsROINode::UpdateInteractionHandleToWorldMatrix ( )

overridevirtual

Update the InteractionHandleToWorldMatrix based on the ObjectToNode and NodeToWorld transforms.

Reimplemented from vtkMRMLMarkupsNode.

◆ UpdateObjectToWorldMatrix()

void vtkMRMLMarkupsROINode::UpdateObjectToWorldMatrix ( )

protected

Calculates the transform from the Object (ROI) to World coordinates.

◆ UpdateROIFromControlPoints()

virtual void vtkMRMLMarkupsROINode::UpdateROIFromControlPoints ( )

virtual

Calculate the ROI dimensions from the control points.

◆ vtkMRMLCopyContentMacro()

vtkMRMLMarkupsROINode::vtkMRMLCopyContentMacro ( vtkMRMLMarkupsROINode )

Copy node content (excludes basic data, such as name and node references).

See also: vtkMRMLNode::CopyContent

◆ WriteCLI()

void vtkMRMLMarkupsROINode::WriteCLI	(	std::vector< std::string > &	commandLine,
		std::string	prefix,
		int	coordinateSystem = vtkMRMLStorageNode::CoordinateSystemRAS,
		int	multipleFlag = 1 )

override

Write this node's information to a vector of strings for passing to a CLI, precede each datum with the prefix if not an empty string coordinateSystemFlag = vtkMRMLStorageNode::CoordinateSystemRAS or vtkMRMLStorageNode::CoordinateSystemLPS multipleFlag = 1 for the whole list, 1 for the first selected control point

Member Data Documentation

◆ ImplicitFunction

vtkSmartPointer<vtkImplicitFunction> vtkMRMLMarkupsROINode::ImplicitFunction { nullptr }

protected

Definition at line 309 of file vtkMRMLMarkupsROINode.h.

◆ ImplicitFunctionWorld

vtkSmartPointer<vtkImplicitFunction> vtkMRMLMarkupsROINode::ImplicitFunctionWorld { nullptr }

protected

Definition at line 310 of file vtkMRMLMarkupsROINode.h.

◆ InsideOut

bool vtkMRMLMarkupsROINode::InsideOut {false}

protected

Definition at line 303 of file vtkMRMLMarkupsROINode.h.

◆ IsUpdatingControlPointsFromROI

bool vtkMRMLMarkupsROINode::IsUpdatingControlPointsFromROI {false}

protected

Definition at line 300 of file vtkMRMLMarkupsROINode.h.

◆ IsUpdatingInteractionHandleToWorldMatrix

bool vtkMRMLMarkupsROINode::IsUpdatingInteractionHandleToWorldMatrix {false}

protected

Definition at line 302 of file vtkMRMLMarkupsROINode.h.

◆ IsUpdatingROIFromControlPoints

bool vtkMRMLMarkupsROINode::IsUpdatingROIFromControlPoints {false}

protected

Definition at line 301 of file vtkMRMLMarkupsROINode.h.

◆ ObjectToNodeMatrix

vtkSmartPointer<vtkMatrix4x4> vtkMRMLMarkupsROINode::ObjectToNodeMatrix { nullptr }

protected

Definition at line 306 of file vtkMRMLMarkupsROINode.h.

◆ ObjectToWorldMatrix

vtkSmartPointer<vtkMatrix4x4> vtkMRMLMarkupsROINode::ObjectToWorldMatrix { nullptr }

protected

Definition at line 307 of file vtkMRMLMarkupsROINode.h.

◆ ROIType

int vtkMRMLMarkupsROINode::ROIType {vtkMRMLMarkupsROINode::ROITypeBox}

protected

Definition at line 296 of file vtkMRMLMarkupsROINode.h.

◆ Size

double vtkMRMLMarkupsROINode::Size[3] { 0.0, 0.0, 0.0 }

protected

Definition at line 298 of file vtkMRMLMarkupsROINode.h.

The documentation for this class was generated from the following file:

Libs/MRML/Core/vtkMRMLMarkupsROINode.h

Public Types

Public Member Functions

Static Public Member Functions

Protected Member Functions

Protected Attributes

Additional Inherited Members

Detailed Description

Member Typedef Documentation

◆ Superclass

Member Enumeration Documentation

◆ anonymous enum

Constructor & Destructor Documentation

◆ vtkMRMLMarkupsROINode() [1/2]

◆ ~vtkMRMLMarkupsROINode()

◆ vtkMRMLMarkupsROINode() [2/2]

Member Function Documentation

◆ ApplyTransform() [1/3]

◆ ApplyTransform() [2/3]

◆ ApplyTransform() [3/3]

◆ CreateDefaultDisplayNodes()

◆ CreateDefaultStorageNode()

◆ CreateNodeInstance()

◆ CreateROIBoxPolyDataWorld()

◆ GenerateBoxBounds()

◆ GenerateOrthogonalMatrix() [1/2]

◆ GenerateOrthogonalMatrix() [2/2]

◆ GetAddIcon()

◆ GetAxis()

◆ GetAxisWorld()

◆ GetBounds()

◆ GetCenter() [1/2]

◆ GetCenter() [2/2]

◆ GetCenterWorld() [1/2]

◆ GetCenterWorld() [2/2]

◆ GetClassName()

◆ GetIcon()

◆ GetImplicitFunction()

◆ GetImplicitFunctionWorld()

◆ GetInsideOut()

◆ GetMarkupType()

◆ GetNodeTagName()

◆ GetObjectBounds()

◆ GetObjectToNodeMatrix()

◆ GetObjectToNodeMatrixRotated()

◆ GetObjectToWorldMatrix()

◆ GetPlaceAddIcon()

◆ GetPlanes() [1/2]

◆ GetPlanes() [2/2]

◆ GetPlanesWorld() [1/2]

◆ GetPlanesWorld() [2/2]

◆ GetRadiusXYZ()

◆ GetRASBounds()

◆ GetROIType()

◆ GetROITypeAsString()

◆ GetROITypeFromString()

◆ GetSize() [1/3]

◆ GetSize() [2/3]

◆ GetSize() [3/3]

◆ GetSizeWorld()

◆ GetTransformedPlanes()

◆ GetXAxis()

◆ GetXAxisWorld()

◆ GetXYZ()

◆ GetYAxis()

◆ GetYAxisWorld()

◆ GetZAxis()

◆ GetZAxisWorld()

◆ InsideOutOff()

◆ InsideOutOn()

◆ IsA()

◆ IsPointInROI()

◆ IsPointInROIWorld()

◆ IsTypeOf()

◆ New()

◆ OnTransformNodeReferenceChanged()

◆ operator=()

◆ PrintSelf()

◆ ProcessMRMLEvents()

◆ SafeDownCast()

◆ SetAndObserveObjectToNodeMatrix()