SegmentEditorEffects.SegmentEditorGrowFromSeedsEffect.SegmentEditorGrowFromSeedsEffect Class Reference

Inheritance diagram for SegmentEditorEffects.SegmentEditorGrowFromSeedsEffect.SegmentEditorGrowFromSeedsEffect:

Collaboration diagram for SegmentEditorEffects.SegmentEditorGrowFromSeedsEffect.SegmentEditorGrowFromSeedsEffect:

Public Member Functions
	__init__ (self, scriptedEffect)
	clone (self)
	computePreviewLabelmap (self, mergedImage, outputLabelmap)
	helpText (self)
	icon (self)
	reset (self)
	setMRMLDefaults (self)
	setupOptionsFrame (self)
	updateAlgorithmParameterFromGUI (self)
	updateGUIFromMRML (self)
	updateMRMLFromGUI (self)
Public Member Functions inherited from SegmentEditorEffects.AbstractScriptedSegmentEditorAutoCompleteEffect.AbstractScriptedSegmentEditorAutoCompleteEffect
	__del__ (self)
	createCursor (self, widget)
	effectiveExtentChanged (self)
	getPreviewNode (self)
	getPreviewOpacity (self)
	getPreviewShow3D (self)
	observeSegmentation (self, observationEnabled)
	onApply (self)
	onCancel (self)
	onPreview (self)
	onSegmentationModified (self, caller, event)
	preview (self)
	setPreviewOpacity (self, opacity)
	setPreviewShow3D (self, show)
Public Member Functions inherited from SegmentEditorEffects.AbstractScriptedSegmentEditorEffect.AbstractScriptedSegmentEditorEffect
	rasToXy (self, ras, viewWidget)
	register (self)
	setWidgetMinMaxStepFromImageSpacing (self, spinbox, imageData)
	xyToIjk (self, xy, viewWidget, image, parentTransformNode=None)
	xyToRas (self, xy, viewWidget)
	xyzToIjk (self, xyz, viewWidget, image, parentTransformNode=None)
	xyzToRas (self, xyz, viewWidget)

Public Attributes
	clippedMaskImageData
	clippedMaskImageDataRequired
	clippedMasterImageData
	clippedMasterImageDataRequired
	extentGrowthRatio
	growCutFilter
	minimumNumberOfSegments
	minimumNumberOfSegmentsWithEditableArea
	seedLocalityFactorSlider
	updateAlgorithmParameterFromGUI
Public Attributes inherited from SegmentEditorEffects.AbstractScriptedSegmentEditorAutoCompleteEffect.AbstractScriptedSegmentEditorAutoCompleteEffect
	applyButton
	autoUpdateCheckBox
	cancelButton
	clippedMaskImageData
	clippedMaskImageDataRequired
	clippedMasterImageData
	clippedMasterImageDataRequired
	delayedAutoUpdateTimer
	extentGrowthRatio
	mergedLabelmapGeometryImage
	minimumExtentMargin
	minimumNumberOfSegments
	minimumNumberOfSegmentsWithEditableArea
	observedSegmentation
	onApply
	onCancel
	onPreview
	onSegmentationModified
	previewButton
	previewComputationInProgress
	previewOpacitySlider
	previewShow3DButton
	segmentationNodeObserverTags
	selectedSegmentIds
	selectedSegmentModifiedTimes
Public Attributes inherited from SegmentEditorEffects.AbstractScriptedSegmentEditorEffect.AbstractScriptedSegmentEditorEffect
	scriptedEffect

Additional Inherited Members
Static Public Member Functions inherited from SegmentEditorEffects.AbstractScriptedSegmentEditorAutoCompleteEffect.AbstractScriptedSegmentEditorAutoCompleteEffect
	isBackgroundLabelmap (labelmapOrientedImageData, label=None)

Detailed Description

AutoCompleteEffect is an effect that can create a full segmentation
from a partial segmentation (not all slices are segmented or only
part of the target structures are painted).

Definition at line 14 of file SegmentEditorGrowFromSeedsEffect.py.

Constructor & Destructor Documentation

__init__()

SegmentEditorEffects.SegmentEditorGrowFromSeedsEffect.SegmentEditorGrowFromSeedsEffect.__init__	(		self,
			scriptedEffect )

Reimplemented from SegmentEditorEffects.AbstractScriptedSegmentEditorAutoCompleteEffect.AbstractScriptedSegmentEditorAutoCompleteEffect.

Definition at line 20 of file SegmentEditorGrowFromSeedsEffect.py.

Member Function Documentation

clone()

SegmentEditorEffects.SegmentEditorGrowFromSeedsEffect.SegmentEditorGrowFromSeedsEffect.clone

(

self

)

Definition at line 30 of file SegmentEditorGrowFromSeedsEffect.py.

computePreviewLabelmap()

SegmentEditorEffects.SegmentEditorGrowFromSeedsEffect.SegmentEditorGrowFromSeedsEffect.computePreviewLabelmap	(		self,
			mergedImage,
			outputLabelmap )

Definition at line 108 of file SegmentEditorGrowFromSeedsEffect.py.

helpText()

SegmentEditorEffects.SegmentEditorGrowFromSeedsEffect.SegmentEditorGrowFromSeedsEffect.helpText

(

self

)

Definition at line 43 of file SegmentEditorGrowFromSeedsEffect.py.

icon()

SegmentEditorEffects.SegmentEditorGrowFromSeedsEffect.SegmentEditorGrowFromSeedsEffect.icon

(

self

)

Definition at line 37 of file SegmentEditorGrowFromSeedsEffect.py.

reset()

SegmentEditorEffects.SegmentEditorGrowFromSeedsEffect.SegmentEditorGrowFromSeedsEffect.reset

(

self

)

Reimplemented from SegmentEditorEffects.AbstractScriptedSegmentEditorAutoCompleteEffect.AbstractScriptedSegmentEditorAutoCompleteEffect.

Definition at line 60 of file SegmentEditorGrowFromSeedsEffect.py.

setMRMLDefaults()

SegmentEditorEffects.SegmentEditorGrowFromSeedsEffect.SegmentEditorGrowFromSeedsEffect.setMRMLDefaults

(

self

)

Reimplemented from SegmentEditorEffects.AbstractScriptedSegmentEditorAutoCompleteEffect.AbstractScriptedSegmentEditorAutoCompleteEffect.

Definition at line 83 of file SegmentEditorGrowFromSeedsEffect.py.

setupOptionsFrame()

SegmentEditorEffects.SegmentEditorGrowFromSeedsEffect.SegmentEditorGrowFromSeedsEffect.setupOptionsFrame

(

self

)

Reimplemented from SegmentEditorEffects.AbstractScriptedSegmentEditorAutoCompleteEffect.AbstractScriptedSegmentEditorAutoCompleteEffect.

Definition at line 65 of file SegmentEditorGrowFromSeedsEffect.py.

updateAlgorithmParameterFromGUI()

SegmentEditorEffects.SegmentEditorGrowFromSeedsEffect.SegmentEditorGrowFromSeedsEffect.updateAlgorithmParameterFromGUI

(

self

)

Definition at line 101 of file SegmentEditorGrowFromSeedsEffect.py.

updateGUIFromMRML()

SegmentEditorEffects.SegmentEditorGrowFromSeedsEffect.SegmentEditorGrowFromSeedsEffect.updateGUIFromMRML

(

self

)

Reimplemented from SegmentEditorEffects.AbstractScriptedSegmentEditorAutoCompleteEffect.AbstractScriptedSegmentEditorAutoCompleteEffect.

Definition at line 87 of file SegmentEditorGrowFromSeedsEffect.py.

updateMRMLFromGUI()

SegmentEditorEffects.SegmentEditorGrowFromSeedsEffect.SegmentEditorGrowFromSeedsEffect.updateMRMLFromGUI

(

self

)

Reimplemented from SegmentEditorEffects.AbstractScriptedSegmentEditorAutoCompleteEffect.AbstractScriptedSegmentEditorAutoCompleteEffect.

Definition at line 97 of file SegmentEditorGrowFromSeedsEffect.py.

Member Data Documentation

clippedMaskImageData

SegmentEditorEffects.SegmentEditorGrowFromSeedsEffect.SegmentEditorGrowFromSeedsEffect.clippedMaskImageData

Definition at line 114 of file SegmentEditorGrowFromSeedsEffect.py.

clippedMaskImageDataRequired

SegmentEditorEffects.SegmentEditorGrowFromSeedsEffect.SegmentEditorGrowFromSeedsEffect.clippedMaskImageDataRequired

Definition at line 27 of file SegmentEditorGrowFromSeedsEffect.py.

clippedMasterImageData

SegmentEditorEffects.SegmentEditorGrowFromSeedsEffect.SegmentEditorGrowFromSeedsEffect.clippedMasterImageData

Definition at line 113 of file SegmentEditorGrowFromSeedsEffect.py.

clippedMasterImageDataRequired

SegmentEditorEffects.SegmentEditorGrowFromSeedsEffect.SegmentEditorGrowFromSeedsEffect.clippedMasterImageDataRequired

Definition at line 26 of file SegmentEditorGrowFromSeedsEffect.py.

extentGrowthRatio

SegmentEditorEffects.SegmentEditorGrowFromSeedsEffect.SegmentEditorGrowFromSeedsEffect.extentGrowthRatio

Definition at line 124 of file SegmentEditorGrowFromSeedsEffect.py.

growCutFilter

SegmentEditorEffects.SegmentEditorGrowFromSeedsEffect.SegmentEditorGrowFromSeedsEffect.growCutFilter

Definition at line 28 of file SegmentEditorGrowFromSeedsEffect.py.

minimumNumberOfSegments

SegmentEditorEffects.SegmentEditorGrowFromSeedsEffect.SegmentEditorGrowFromSeedsEffect.minimumNumberOfSegments

Definition at line 24 of file SegmentEditorGrowFromSeedsEffect.py.

minimumNumberOfSegmentsWithEditableArea

SegmentEditorEffects.SegmentEditorGrowFromSeedsEffect.SegmentEditorGrowFromSeedsEffect.minimumNumberOfSegmentsWithEditableArea

Definition at line 25 of file SegmentEditorGrowFromSeedsEffect.py.

seedLocalityFactorSlider

SegmentEditorEffects.SegmentEditorGrowFromSeedsEffect.SegmentEditorGrowFromSeedsEffect.seedLocalityFactorSlider

Definition at line 69 of file SegmentEditorGrowFromSeedsEffect.py.

updateAlgorithmParameterFromGUI

SegmentEditorEffects.SegmentEditorGrowFromSeedsEffect.SegmentEditorGrowFromSeedsEffect.updateAlgorithmParameterFromGUI

Definition at line 81 of file SegmentEditorGrowFromSeedsEffect.py.

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The documentation for this class was generated from the following file:

• Modules/Loadable/Segmentations/EditorEffects/Python/SegmentEditorEffects/SegmentEditorGrowFromSeedsEffect.py