vtkITKArchetypeImageSeriesReader Class Reference

Read a series of files that have a common naming convention. More...

#include <Libs/vtkITK/vtkITKArchetypeImageSeriesReader.h>

Inheritance diagram for vtkITKArchetypeImageSeriesReader:

Collaboration diagram for vtkITKArchetypeImageSeriesReader:

Public Types
enum	{ GDCM = 0 , DCMTK }
	Reader to use when reading as a scalar image data. More...
using	CoordinateOrientationCode = itk::SpatialOrientationEnums::ValidCoordinateOrientations
typedef vtkImageAlgorithm	Superclass

Public Member Functions
unsigned int	AddFileName (const char *filename)
void	AnalyzeDicomHeaders ()
void	AssembleNthVolume (int n)
int	AssembleVolumeContainingArchetype ()
virtual int	CanReadFile (const char *filename)
	Determine if the file can be read using ITK.
int	ExistContentTime (const char *contentTime)
int	ExistDiffusionGradientOrientation (float *dgo)
int	ExistEchoNumbers (const char *echoNumbers)
int	ExistImageOrientationPatient (float *directionCosine)
int	ExistImagePositionPatient (float *ipp)
int	ExistSeriesInstanceUID (const char *SeriesInstanceUID)
	check the existence of given discriminator
int	ExistSliceLocation (float sliceLocation)
int	ExistTriggerTime (const char *triggerTime)
virtual bool	GetAnalyzeHeader ()
virtual char *	GetArchetype ()
virtual const char *	GetClassName ()
virtual double *	GetDefaultDataOrigin ()
virtual void	GetDefaultDataOrigin (double &, double &, double &)
virtual void	GetDefaultDataOrigin (double[3])
virtual double *	GetDefaultDataSpacing ()
virtual void	GetDefaultDataSpacing (double &, double &, double &)
virtual void	GetDefaultDataSpacing (double[3])
virtual CoordinateOrientationCode	GetDesiredCoordinateOrientation ()
virtual int	GetDICOMImageIOApproach ()
const char *	GetFileName (unsigned int n)
const std::vector< std::string > &	GetFileNames ()
	Return all the file names.
virtual int	GetFileNameSliceCount ()
virtual int	GetFileNameSliceOffset ()
virtual int	GetFileNameSliceSpacing ()
bool	GetGroupingByTags ()
	set/get functions for grouping by tags
vtkMatrix4x4 *	GetMeasurementFrameMatrix ()
	Returns the Measurement frame matrix.
const itk::MetaDataDictionary &	GetMetaDataDictionary () const
	Return the MetaDataDictionary from the ITK layer.
const char *	GetNthContentTime (unsigned int n)
float *	GetNthDiffusionGradientOrientation (unsigned int n)
const char *	GetNthEchoNumbers (unsigned int n)
const char *	GetNthFileName (int idxSeriesInstanceUID, int idxContentTime, int idxTriggerTime, int idxEchoNumbers, int idxDiffusionGradientOrientation, int idxSliceLocation, int idxImageOrientationPatient, int n)
float *	GetNthImageOrientationPatient (unsigned int n)
float *	GetNthImagePositionPatient (unsigned int n)
const char *	GetNthKey (unsigned int n)
const char *	GetNthSeriesInstanceUID (unsigned int n)
	methods to get N-th discriminator
float	GetNthSliceLocation (unsigned int n)
const char *	GetNthTriggerTime (unsigned int n)
const char *	GetNthValue (unsigned int n)
virtual unsigned int	GetNumberOfComponents ()
unsigned int	GetNumberOfContentTime ()
unsigned int	GetNumberOfDiffusionGradientOrientation ()
unsigned int	GetNumberOfEchoNumbers ()
unsigned int	GetNumberOfFileNames ()
	See how many file names were generated during ExecuteInformation.
unsigned int	GetNumberOfImageOrientationPatient ()
unsigned int	GetNumberOfImagePositionPatient ()
unsigned int	GetNumberOfItemsInDictionary ()
unsigned int	GetNumberOfSeriesInstanceUIDs ()
	get number of certain discriminators in the directory
unsigned int	GetNumberOfSliceLocation ()
unsigned int	GetNumberOfTriggerTime ()
virtual int	GetOutputScalarType ()
vtkMatrix4x4 *	GetRasToIjkMatrix ()
	Returns an IJK to RAS transformation matrix.
int	GetSelectedContentTime ()
int	GetSelectedDiffusion ()
int	GetSelectedEchoNumbers ()
int	GetSelectedOrientation ()
int	GetSelectedSlice ()
int	GetSelectedTriggerTime ()
int	GetSelectedUID ()
virtual int	GetSingleFile ()
const char *	GetTagValue (char *tag)
virtual char	GetUseNativeCoordinateOrientation ()
virtual int	GetUseOrientationFromFile ()
virtual int	GetVoxelVectorType ()
void	GroupFiles (int idxSeriesInstanceUID, int idxContentTime, int idxTriggerTime, int idxEchoNumbers, int idxDiffusionGradientOrientation, int idxSliceLocation, int idxImageOrientationPatient)
bool	HasKey (char *tag)
int	InsertContentTime (const char *aTime)
int	InsertDiffusionGradientOrientation (float *a)
int	InsertEchoNumbers (const char *aEcho)
int	InsertImageOrientationPatient (float *a)
int	InsertImagePositionPatient (float *a)
int	InsertNextSliceLocation ()
int	InsertSeriesInstanceUIDs (const char *aUID)
int	InsertSliceLocation (float a)
int	InsertTriggerTime (const char *aTime)
virtual int	IsA (const char *type)
void	ParseDictionary ()
void	PrintSelf (ostream &os, vtkIndent indent) override
void	ResetFileNames ()
virtual void	SetAnalyzeHeader (bool)
	Whether try analyzing the dicom headers.
virtual void	SetArchetype (const char *)
	Specify the archetype filename for the series.
virtual void	SetDefaultDataOrigin (double, double, double)
virtual void	SetDefaultDataOrigin (double[3])
virtual void	SetDefaultDataSpacing (double, double, double)
virtual void	SetDefaultDataSpacing (double[3])
void	SetDesiredCoordinateOrientationToAxial ()
	Set the orientation of the output image.
void	SetDesiredCoordinateOrientationToCoronal ()
void	SetDesiredCoordinateOrientationToNative ()
void	SetDesiredCoordinateOrientationToSagittal ()
virtual void	SetDICOMImageIOApproach (int)
void	SetDICOMImageIOApproachToDCMTK ()
void	SetDICOMImageIOApproachToGDCM ()
virtual void	SetFileNameSliceCount (int)
virtual void	SetFileNameSliceOffset (int)
virtual void	SetFileNameSliceSpacing (int)
void	SetGroupingByTagsOff ()
void	SetGroupingByTagsOn ()
virtual void	SetNumberOfComponents (unsigned int)
	Get number of scalars.
virtual void	SetOutputScalarType (int)
	Get the file format. Pixels are this type in the file.
virtual void	SetOutputScalarTypeToChar ()
virtual void	SetOutputScalarTypeToDouble ()
virtual void	SetOutputScalarTypeToFloat ()
virtual void	SetOutputScalarTypeToInt ()
virtual void	SetOutputScalarTypeToLong ()
virtual void	SetOutputScalarTypeToNative ()
virtual void	SetOutputScalarTypeToShort ()
virtual void	SetOutputScalarTypeToUnsignedChar ()
virtual void	SetOutputScalarTypeToUnsignedInt ()
virtual void	SetOutputScalarTypeToUnsignedLong ()
virtual void	SetOutputScalarTypeToUnsignedShort ()
void	SetSelectedContentTime (int v)
void	SetSelectedDiffusion (int v)
void	SetSelectedEchoNumbers (int v)
void	SetSelectedOrientation (int v)
void	SetSelectedSlice (int v)
void	SetSelectedTriggerTime (int v)
void	SetSelectedUID (int v)
virtual void	SetSingleFile (int)
	Whether load in a single file or a series.
void	SetUseNativeOriginOff ()
	Use image center as origin.
void	SetUseNativeOriginOn ()
	Use image origin from the file.
virtual void	SetUseOrientationFromFile (int)
	Whether to use orientation from file.
virtual void	SetVoxelVectorType (int)
	Defines how to interpret voxel components.

Static Public Member Functions
static bool	IsListPixelComponentTypeInMetaDataDictionary (const itk::MetaDataDictionary &dictionary)
static int	IsTypeOf (const char *type)
static vtkITKArchetypeImageSeriesReader *	New ()
static bool	ReadMeasurementFrameMatrixFromMetaDataDictionary (const itk::MetaDataDictionary &dictionary, vtkMatrix4x4 *measurementFrameMatrix)
static vtkITKArchetypeImageSeriesReader *	SafeDownCast (vtkObject *o)

Public Attributes
std::vector< std::string >	Tags
std::vector< std::string >	TagValues

Protected Member Functions
itk::ImageIOBase::Pointer	GetImageIO (const char *filename)
	Get the image IO for the specified filename.
void	GetScalarRangeMetaDataKeys (itk::ImageIOBase::Pointer imageIO, std::string range_keys[2])
int	RequestInformation (vtkInformation *, vtkInformationVector **, vtkInformationVector *) override
void	SetMetaDataScalarRangeToPointDataInfo (vtkImageData *data)
	vtkITKArchetypeImageSeriesReader ()
	~vtkITKArchetypeImageSeriesReader () override

Static Protected Member Functions
static std::string	GetMetaDataWithoutSpaces (const itk::MetaDataDictionary &dict, const std::string &tag)
	Get MetaData from dictionary, removing all whitespaces from the string.

Protected Attributes
std::vector< std::string >	AllFileNames
bool	AnalyzeHeader
char *	Archetype
bool	ArchetypeIsDICOM
std::vector< std::string >	ContentTime
int	DataExtent [6]
double	DefaultDataOrigin [3]
double	DefaultDataSpacing [3]
CoordinateOrientationCode	DesiredCoordinateOrientation
int	DICOMImageIOApproach
itk::MetaDataDictionary	Dictionary
std::vector< std::vector< float > >	DiffusionGradientOrientation
std::vector< std::string >	EchoNumbers
std::vector< std::string >	FileNames
int	FileNameSliceCount
std::vector< std::pair< double, int > >	FileNameSliceKey
int	FileNameSliceOffset
int	FileNameSliceSpacing
bool	GroupingByTags
std::vector< std::vector< float > >	ImageOrientationPatient
std::vector< std::vector< float > >	ImagePositionPatient
unsigned int	IndexArchetype
std::vector< long int >	IndexContentTime
std::vector< long int >	IndexDiffusionGradientOrientation
std::vector< long int >	IndexEchoNumbers
std::vector< long int >	IndexImageOrientationPatient
std::vector< long int >	IndexImagePositionPatient
std::vector< long int >	IndexSeriesInstanceUIDs
	index of each dicom file into the above arrays
std::vector< long int >	IndexSliceLocation
std::vector< long int >	IndexTriggerTime
bool	IsOnlyFile
vtkMatrix4x4 *	MeasurementFrameMatrix
std::vector< double >	MetaDataScalarRangeMaxima
std::vector< double >	MetaDataScalarRangeMinima
unsigned int	NumberOfComponents
int	OutputScalarType
vtkMatrix4x4 *	RasToIjkMatrix
float	ScanAxis [3]
float	ScanOrigin [3]
int	SelectedContentTime
int	SelectedDiffusion
int	SelectedEchoNumbers
int	SelectedOrientation
int	SelectedSlice
int	SelectedTriggerTime
int	SelectedUID
std::vector< std::string >	SeriesInstanceUIDs
int	SingleFile
std::vector< float >	SliceLocation
std::vector< std::string >	TriggerTime
char	UseNativeCoordinateOrientation
bool	UseNativeOrigin
char	UseNativeScalarType
int	UseOrientationFromFile
int	VoxelVectorType

Detailed Description

Read a series of files that have a common naming convention.

ArchetypeImageSeriesReader creates a volume from a series of images stored in files. The series are represented by one filename. This filename, the archetype, is any one of the files in the series.

Concrete subclasses:

• vtkITKArchetypeDiffusionTensorImageReaderFile for diffusion imaging
• vtkITKArchetypeImageSeriesScalarReader for scalar images
• vtkITKArchetypeImageSeriesVectorReaderFile for reading vector image from a single file
• vtkITKArchetypeImageSeriesVectorReaderSeries for reading vector image from multiple files

vtkITKImageSequenceReader can be used instead for reading time sequence of images.

Note

This work is part of the National Alliance for Medical Image Computing (NAMIC), funded by the National Institutes of Health through the NIH Roadmap for Medical Research, Grant U54 EB005149.

Definition at line 53 of file vtkITKArchetypeImageSeriesReader.h.

Member Typedef Documentation

CoordinateOrientationCode

using vtkITKArchetypeImageSeriesReader::CoordinateOrientationCode = itk::SpatialOrientationEnums::ValidCoordinateOrientations

Definition at line 60 of file vtkITKArchetypeImageSeriesReader.h.

Superclass

typedef vtkImageAlgorithm vtkITKArchetypeImageSeriesReader::Superclass

Definition at line 57 of file vtkITKArchetypeImageSeriesReader.h.

Member Enumeration Documentation

anonymous enum

anonymous enum

Reader to use when reading as a scalar image data.

Enumerator
GDCM
DCMTK

Definition at line 218 of file vtkITKArchetypeImageSeriesReader.h.

Constructor & Destructor Documentation

vtkITKArchetypeImageSeriesReader()

vtkITKArchetypeImageSeriesReader::vtkITKArchetypeImageSeriesReader ( )

protected

~vtkITKArchetypeImageSeriesReader()

vtkITKArchetypeImageSeriesReader::~vtkITKArchetypeImageSeriesReader ( )

overrideprotected

Member Function Documentation

AddFileName()

unsigned int vtkITKArchetypeImageSeriesReader::AddFileName

(

const char *

filename

)

Specify the file names to be used when looking for extra files that match the archetype in defining the volume to load (e.g. other candidate dicom files to look in for matching tags)

AnalyzeDicomHeaders()

void vtkITKArchetypeImageSeriesReader::AnalyzeDicomHeaders

(

)

AssembleNthVolume()

void vtkITKArchetypeImageSeriesReader::AssembleNthVolume

(

int

n

)

AssembleVolumeContainingArchetype()

int vtkITKArchetypeImageSeriesReader::AssembleVolumeContainingArchetype

(

)

CanReadFile()

virtual int vtkITKArchetypeImageSeriesReader::CanReadFile ( const char * filename )

virtual

Determine if the file can be read using ITK.

ExistContentTime()

int vtkITKArchetypeImageSeriesReader::ExistContentTime ( const char * contentTime )

inline

Definition at line 378 of file vtkITKArchetypeImageSeriesReader.h.

ExistDiffusionGradientOrientation()

int vtkITKArchetypeImageSeriesReader::ExistDiffusionGradientOrientation ( float * dgo )

inline

Definition at line 414 of file vtkITKArchetypeImageSeriesReader.h.

ExistEchoNumbers()

int vtkITKArchetypeImageSeriesReader::ExistEchoNumbers ( const char * echoNumbers )

inline

Definition at line 402 of file vtkITKArchetypeImageSeriesReader.h.

ExistImageOrientationPatient()

int vtkITKArchetypeImageSeriesReader::ExistImageOrientationPatient ( float * directionCosine )

inline

input has to have six elements

Definition at line 447 of file vtkITKArchetypeImageSeriesReader.h.

ExistImagePositionPatient()

int vtkITKArchetypeImageSeriesReader::ExistImagePositionPatient ( float * ipp )

inline

Definition at line 481 of file vtkITKArchetypeImageSeriesReader.h.

ExistSeriesInstanceUID()

int vtkITKArchetypeImageSeriesReader::ExistSeriesInstanceUID ( const char * SeriesInstanceUID )

inline

check the existence of given discriminator

Definition at line 366 of file vtkITKArchetypeImageSeriesReader.h.

ExistSliceLocation()

int vtkITKArchetypeImageSeriesReader::ExistSliceLocation ( float sliceLocation )

inline

Definition at line 441 of file vtkITKArchetypeImageSeriesReader.h.

ExistTriggerTime()

int vtkITKArchetypeImageSeriesReader::ExistTriggerTime ( const char * triggerTime )

inline

Definition at line 390 of file vtkITKArchetypeImageSeriesReader.h.

GetAnalyzeHeader()

virtual bool vtkITKArchetypeImageSeriesReader::GetAnalyzeHeader ( )

virtual

GetArchetype()

virtual char * vtkITKArchetypeImageSeriesReader::GetArchetype ( )

virtual

GetClassName()

virtual const char * vtkITKArchetypeImageSeriesReader::GetClassName ( )

virtual

Reimplemented in vtkITKArchetypeDiffusionTensorImageReaderFile, vtkITKArchetypeImageSeriesScalarReader, vtkITKArchetypeImageSeriesVectorReaderFile, and vtkITKArchetypeImageSeriesVectorReaderSeries.

GetDefaultDataOrigin() [1/3]

virtual double * vtkITKArchetypeImageSeriesReader::GetDefaultDataOrigin ( )

virtual

GetDefaultDataOrigin() [2/3]

virtual void vtkITKArchetypeImageSeriesReader::GetDefaultDataOrigin ( double & , double & , double &  )

virtual

GetDefaultDataOrigin() [3/3]

virtual void vtkITKArchetypeImageSeriesReader::GetDefaultDataOrigin ( double [3] )

virtual

GetDefaultDataSpacing() [1/3]

virtual double * vtkITKArchetypeImageSeriesReader::GetDefaultDataSpacing ( )

virtual

GetDefaultDataSpacing() [2/3]

virtual void vtkITKArchetypeImageSeriesReader::GetDefaultDataSpacing ( double & , double & , double &  )

virtual

GetDefaultDataSpacing() [3/3]

virtual void vtkITKArchetypeImageSeriesReader::GetDefaultDataSpacing ( double [3] )

virtual

GetDesiredCoordinateOrientation()

virtual CoordinateOrientationCode vtkITKArchetypeImageSeriesReader::GetDesiredCoordinateOrientation ( )

virtual

GetDICOMImageIOApproach()

virtual int vtkITKArchetypeImageSeriesReader::GetDICOMImageIOApproach ( )

virtual

GetFileName()

const char * vtkITKArchetypeImageSeriesReader::GetFileName

(

unsigned int

n

)

GetFileNames()

const std::vector< std::string > & vtkITKArchetypeImageSeriesReader::GetFileNames

(

)

Return all the file names.

GetFileNameSliceCount()

virtual int vtkITKArchetypeImageSeriesReader::GetFileNameSliceCount ( )

virtual

GetFileNameSliceOffset()

virtual int vtkITKArchetypeImageSeriesReader::GetFileNameSliceOffset ( )

virtual

GetFileNameSliceSpacing()

virtual int vtkITKArchetypeImageSeriesReader::GetFileNameSliceSpacing ( )

virtual

GetGroupingByTags()

bool vtkITKArchetypeImageSeriesReader::GetGroupingByTags ( )

inline

set/get functions for grouping by tags

Definition at line 279 of file vtkITKArchetypeImageSeriesReader.h.

GetImageIO()

itk::ImageIOBase::Pointer vtkITKArchetypeImageSeriesReader::GetImageIO ( const char * filename )

protected

Get the image IO for the specified filename.

GetMeasurementFrameMatrix()

vtkMatrix4x4 * vtkITKArchetypeImageSeriesReader::GetMeasurementFrameMatrix

(

)

Returns the Measurement frame matrix.

GetMetaDataDictionary()

const itk::MetaDataDictionary & vtkITKArchetypeImageSeriesReader::GetMetaDataDictionary

(

)

const

Return the MetaDataDictionary from the ITK layer.

GetMetaDataWithoutSpaces()

static std::string vtkITKArchetypeImageSeriesReader::GetMetaDataWithoutSpaces ( const itk::MetaDataDictionary & dict, const std::string & tag )

staticprotected

Get MetaData from dictionary, removing all whitespaces from the string.

GetNthContentTime()

const char * vtkITKArchetypeImageSeriesReader::GetNthContentTime ( unsigned int n )

inline

Definition at line 517 of file vtkITKArchetypeImageSeriesReader.h.

GetNthDiffusionGradientOrientation()

float * vtkITKArchetypeImageSeriesReader::GetNthDiffusionGradientOrientation ( unsigned int n )

inline

Definition at line 544 of file vtkITKArchetypeImageSeriesReader.h.

GetNthEchoNumbers()

const char * vtkITKArchetypeImageSeriesReader::GetNthEchoNumbers ( unsigned int n )

inline

Definition at line 535 of file vtkITKArchetypeImageSeriesReader.h.

GetNthFileName()

const char * vtkITKArchetypeImageSeriesReader::GetNthFileName	(	int	idxSeriesInstanceUID,
		int	idxContentTime,
		int	idxTriggerTime,
		int	idxEchoNumbers,
		int	idxDiffusionGradientOrientation,
		int	idxSliceLocation,
		int	idxImageOrientationPatient,
		int	n )

GetNthImageOrientationPatient()

float * vtkITKArchetypeImageSeriesReader::GetNthImageOrientationPatient ( unsigned int n )

inline

Definition at line 567 of file vtkITKArchetypeImageSeriesReader.h.

GetNthImagePositionPatient()

float * vtkITKArchetypeImageSeriesReader::GetNthImagePositionPatient ( unsigned int n )

inline

Definition at line 581 of file vtkITKArchetypeImageSeriesReader.h.

GetNthKey()

const char * vtkITKArchetypeImageSeriesReader::GetNthKey

(

unsigned int

n

)

GetNthSeriesInstanceUID()

const char * vtkITKArchetypeImageSeriesReader::GetNthSeriesInstanceUID ( unsigned int n )

inline

methods to get N-th discriminator

Definition at line 508 of file vtkITKArchetypeImageSeriesReader.h.

GetNthSliceLocation()

float vtkITKArchetypeImageSeriesReader::GetNthSliceLocation ( unsigned int n )

inline

Definition at line 558 of file vtkITKArchetypeImageSeriesReader.h.

GetNthTriggerTime()

const char * vtkITKArchetypeImageSeriesReader::GetNthTriggerTime ( unsigned int n )

inline

Definition at line 526 of file vtkITKArchetypeImageSeriesReader.h.

GetNthValue()

const char * vtkITKArchetypeImageSeriesReader::GetNthValue

(

unsigned int

n

)

GetNumberOfComponents()

virtual unsigned int vtkITKArchetypeImageSeriesReader::GetNumberOfComponents ( )

virtual

GetNumberOfContentTime()

unsigned int vtkITKArchetypeImageSeriesReader::GetNumberOfContentTime ( )

inline

Definition at line 351 of file vtkITKArchetypeImageSeriesReader.h.

GetNumberOfDiffusionGradientOrientation()

unsigned int vtkITKArchetypeImageSeriesReader::GetNumberOfDiffusionGradientOrientation ( )

inline

Definition at line 359 of file vtkITKArchetypeImageSeriesReader.h.

GetNumberOfEchoNumbers()

unsigned int vtkITKArchetypeImageSeriesReader::GetNumberOfEchoNumbers ( )

inline

Definition at line 355 of file vtkITKArchetypeImageSeriesReader.h.

GetNumberOfFileNames()

unsigned int vtkITKArchetypeImageSeriesReader::GetNumberOfFileNames

(

)

See how many file names were generated during ExecuteInformation.

GetNumberOfImageOrientationPatient()

unsigned int vtkITKArchetypeImageSeriesReader::GetNumberOfImageOrientationPatient ( )

inline

Definition at line 361 of file vtkITKArchetypeImageSeriesReader.h.

GetNumberOfImagePositionPatient()

unsigned int vtkITKArchetypeImageSeriesReader::GetNumberOfImagePositionPatient ( )

inline

Definition at line 363 of file vtkITKArchetypeImageSeriesReader.h.

GetNumberOfItemsInDictionary()

unsigned int vtkITKArchetypeImageSeriesReader::GetNumberOfItemsInDictionary

(

)

GetNumberOfSeriesInstanceUIDs()

unsigned int vtkITKArchetypeImageSeriesReader::GetNumberOfSeriesInstanceUIDs ( )

inline

get number of certain discriminators in the directory

Definition at line 349 of file vtkITKArchetypeImageSeriesReader.h.

GetNumberOfSliceLocation()

unsigned int vtkITKArchetypeImageSeriesReader::GetNumberOfSliceLocation ( )

inline

Definition at line 357 of file vtkITKArchetypeImageSeriesReader.h.

GetNumberOfTriggerTime()

unsigned int vtkITKArchetypeImageSeriesReader::GetNumberOfTriggerTime ( )

inline

Definition at line 353 of file vtkITKArchetypeImageSeriesReader.h.

GetOutputScalarType()

virtual int vtkITKArchetypeImageSeriesReader::GetOutputScalarType ( )

virtual

GetRasToIjkMatrix()

vtkMatrix4x4 * vtkITKArchetypeImageSeriesReader::GetRasToIjkMatrix

(

)

Returns an IJK to RAS transformation matrix.

GetScalarRangeMetaDataKeys()

void vtkITKArchetypeImageSeriesReader::GetScalarRangeMetaDataKeys ( itk::ImageIOBase::Pointer imageIO, std::string range_keys[2] )

protected

GetSelectedContentTime()

int vtkITKArchetypeImageSeriesReader::GetSelectedContentTime ( )

inline

---

Definition at line 295 of file vtkITKArchetypeImageSeriesReader.h.

GetSelectedDiffusion()

int vtkITKArchetypeImageSeriesReader::GetSelectedDiffusion ( )

inline

---

Definition at line 322 of file vtkITKArchetypeImageSeriesReader.h.

GetSelectedEchoNumbers()

int vtkITKArchetypeImageSeriesReader::GetSelectedEchoNumbers ( )

inline

---

Definition at line 313 of file vtkITKArchetypeImageSeriesReader.h.

GetSelectedOrientation()

int vtkITKArchetypeImageSeriesReader::GetSelectedOrientation ( )

inline

---

Definition at line 340 of file vtkITKArchetypeImageSeriesReader.h.

GetSelectedSlice()

int vtkITKArchetypeImageSeriesReader::GetSelectedSlice ( )

inline

---

Definition at line 331 of file vtkITKArchetypeImageSeriesReader.h.

GetSelectedTriggerTime()

int vtkITKArchetypeImageSeriesReader::GetSelectedTriggerTime ( )

inline

---

Definition at line 304 of file vtkITKArchetypeImageSeriesReader.h.

GetSelectedUID()

int vtkITKArchetypeImageSeriesReader::GetSelectedUID ( )

inline

---

Definition at line 286 of file vtkITKArchetypeImageSeriesReader.h.

GetSingleFile()

virtual int vtkITKArchetypeImageSeriesReader::GetSingleFile ( )

virtual

GetTagValue()

const char * vtkITKArchetypeImageSeriesReader::GetTagValue

(

char *

tag

)

GetUseNativeCoordinateOrientation()

virtual char vtkITKArchetypeImageSeriesReader::GetUseNativeCoordinateOrientation ( )

virtual

GetUseOrientationFromFile()

virtual int vtkITKArchetypeImageSeriesReader::GetUseOrientationFromFile ( )

virtual

GetVoxelVectorType()

virtual int vtkITKArchetypeImageSeriesReader::GetVoxelVectorType ( )

virtual

GroupFiles()

void vtkITKArchetypeImageSeriesReader::GroupFiles	(	int	idxSeriesInstanceUID,
		int	idxContentTime,
		int	idxTriggerTime,
		int	idxEchoNumbers,
		int	idxDiffusionGradientOrientation,
		int	idxSliceLocation,
		int	idxImageOrientationPatient )

HasKey()

bool vtkITKArchetypeImageSeriesReader::HasKey

(

char *

tag

)

InsertContentTime()

int vtkITKArchetypeImageSeriesReader::InsertContentTime ( const char * aTime )

inline

Definition at line 610 of file vtkITKArchetypeImageSeriesReader.h.

InsertDiffusionGradientOrientation()

int vtkITKArchetypeImageSeriesReader::InsertDiffusionGradientOrientation ( float * a )

inline

Definition at line 649 of file vtkITKArchetypeImageSeriesReader.h.

InsertEchoNumbers()

int vtkITKArchetypeImageSeriesReader::InsertEchoNumbers ( const char * aEcho )

inline

Definition at line 636 of file vtkITKArchetypeImageSeriesReader.h.

InsertImageOrientationPatient()

int vtkITKArchetypeImageSeriesReader::InsertImageOrientationPatient ( float * a )

inline

Definition at line 690 of file vtkITKArchetypeImageSeriesReader.h.

InsertImagePositionPatient()

int vtkITKArchetypeImageSeriesReader::InsertImagePositionPatient ( float * a )

inline

Definition at line 710 of file vtkITKArchetypeImageSeriesReader.h.

InsertNextSliceLocation()

int vtkITKArchetypeImageSeriesReader::InsertNextSliceLocation ( )

inline

Linearly insert the next slicer. This prevents a n*log(n) insertion

See also

InsertSliceLocation()

Definition at line 683 of file vtkITKArchetypeImageSeriesReader.h.

InsertSeriesInstanceUIDs()

int vtkITKArchetypeImageSeriesReader::InsertSeriesInstanceUIDs ( const char * aUID )

inline

insert unique item into array. Duplicate code for TCL wrapping. TODO: need to clean up

Definition at line 597 of file vtkITKArchetypeImageSeriesReader.h.

InsertSliceLocation()

int vtkITKArchetypeImageSeriesReader::InsertSliceLocation ( float a )

inline

Append the slice location a. Do nothing if the slice location has already been added.

See also

InsertNextSliceLocation()

Definition at line 670 of file vtkITKArchetypeImageSeriesReader.h.

InsertTriggerTime()

int vtkITKArchetypeImageSeriesReader::InsertTriggerTime ( const char * aTime )

inline

Definition at line 623 of file vtkITKArchetypeImageSeriesReader.h.

IsA()

virtual int vtkITKArchetypeImageSeriesReader::IsA ( const char * type )

virtual

Reimplemented in vtkITKArchetypeDiffusionTensorImageReaderFile, vtkITKArchetypeImageSeriesScalarReader, vtkITKArchetypeImageSeriesVectorReaderFile, and vtkITKArchetypeImageSeriesVectorReaderSeries.

IsListPixelComponentTypeInMetaDataDictionary()

static bool vtkITKArchetypeImageSeriesReader::IsListPixelComponentTypeInMetaDataDictionary ( const itk::MetaDataDictionary & dictionary )

static

Returns true if the pixel component type is a list type (i.e., not spatial). Returns false if the pixel component type is unknown or a different type. This can be used to get a hint that the image voxels store non-spatial vectors. Currently, it can only get information from NRRD files (for all other formats it will return false).

IsTypeOf()

static int vtkITKArchetypeImageSeriesReader::IsTypeOf ( const char * type )

static

New()

static vtkITKArchetypeImageSeriesReader * vtkITKArchetypeImageSeriesReader::New ( )

static

ParseDictionary()

void vtkITKArchetypeImageSeriesReader::ParseDictionary

(

)

PrintSelf()

void vtkITKArchetypeImageSeriesReader::PrintSelf ( ostream & os, vtkIndent indent )

override

ReadMeasurementFrameMatrixFromMetaDataDictionary()

static bool vtkITKArchetypeImageSeriesReader::ReadMeasurementFrameMatrixFromMetaDataDictionary ( const itk::MetaDataDictionary & dictionary, vtkMatrix4x4 * measurementFrameMatrix )

static

RequestInformation()

int vtkITKArchetypeImageSeriesReader::RequestInformation ( vtkInformation * , vtkInformationVector ** , vtkInformationVector *  )

overrideprotected

ResetFileNames()

void vtkITKArchetypeImageSeriesReader::ResetFileNames

(

)

SafeDownCast()

static vtkITKArchetypeImageSeriesReader * vtkITKArchetypeImageSeriesReader::SafeDownCast ( vtkObject * o )

static

SetAnalyzeHeader()

virtual void vtkITKArchetypeImageSeriesReader::SetAnalyzeHeader ( bool )

virtual

Whether try analyzing the dicom headers.

SetArchetype()

virtual void vtkITKArchetypeImageSeriesReader::SetArchetype ( const char * )

virtual

Specify the archetype filename for the series.

SetDefaultDataOrigin() [1/2]

virtual void vtkITKArchetypeImageSeriesReader::SetDefaultDataOrigin ( double , double , double  )

virtual

Set/Get the default origin of the data (location of first pixel in the file). This will be used if the reader provided origin is 0.0. (Default is 0.0)

SetDefaultDataOrigin() [2/2]

virtual void vtkITKArchetypeImageSeriesReader::SetDefaultDataOrigin ( double [3] )

virtual

SetDefaultDataSpacing() [1/2]

virtual void vtkITKArchetypeImageSeriesReader::SetDefaultDataSpacing ( double , double , double  )

virtual

Set/Get the default spacing of the data in the file. This will be used if the reader provided spacing is 1.0. (Default is 1.0)

SetDefaultDataSpacing() [2/2]

virtual void vtkITKArchetypeImageSeriesReader::SetDefaultDataSpacing ( double [3] )

virtual

SetDesiredCoordinateOrientationToAxial()

void vtkITKArchetypeImageSeriesReader::SetDesiredCoordinateOrientationToAxial ( )

inline

Set the orientation of the output image.

CoordinateOrientationCode::ITK_COORDINATE_ORIENTATION_RPS;

Definition at line 119 of file vtkITKArchetypeImageSeriesReader.h.

SetDesiredCoordinateOrientationToCoronal()

void vtkITKArchetypeImageSeriesReader::SetDesiredCoordinateOrientationToCoronal ( )

inline

CoordinateOrientationCode::ITK_COORDINATE_ORIENTATION_RIP;

Definition at line 126 of file vtkITKArchetypeImageSeriesReader.h.

SetDesiredCoordinateOrientationToNative()

void vtkITKArchetypeImageSeriesReader::SetDesiredCoordinateOrientationToNative ( )

inline

Definition at line 140 of file vtkITKArchetypeImageSeriesReader.h.

SetDesiredCoordinateOrientationToSagittal()

void vtkITKArchetypeImageSeriesReader::SetDesiredCoordinateOrientationToSagittal ( )

inline

CoordinateOrientationCode::ITK_COORDINATE_ORIENTATION_AIR;

Definition at line 133 of file vtkITKArchetypeImageSeriesReader.h.

SetDICOMImageIOApproach()

virtual void vtkITKArchetypeImageSeriesReader::SetDICOMImageIOApproach ( int )

virtual

SetDICOMImageIOApproachToDCMTK()

void vtkITKArchetypeImageSeriesReader::SetDICOMImageIOApproachToDCMTK ( )

inline

Definition at line 226 of file vtkITKArchetypeImageSeriesReader.h.

SetDICOMImageIOApproachToGDCM()

void vtkITKArchetypeImageSeriesReader::SetDICOMImageIOApproachToGDCM ( )

inline

Definition at line 225 of file vtkITKArchetypeImageSeriesReader.h.

SetFileNameSliceCount()

virtual void vtkITKArchetypeImageSeriesReader::SetFileNameSliceCount ( int )

virtual

The maximum number of files to include in the series. If this is zero, then all files will be included. (Default is 0)

SetFileNameSliceOffset()

virtual void vtkITKArchetypeImageSeriesReader::SetFileNameSliceOffset ( int )

virtual

When reading files which start at an unusual index, this can be added to the slice number when generating the file name (default = 0)

SetFileNameSliceSpacing()

virtual void vtkITKArchetypeImageSeriesReader::SetFileNameSliceSpacing ( int )

virtual

When reading files which have regular, but non contiguous slices (e.g. filename.1,filename.3,filename.5) a spacing can be specified to skip missing files (default = 1)

SetGroupingByTagsOff()

void vtkITKArchetypeImageSeriesReader::SetGroupingByTagsOff ( )

inline

Definition at line 283 of file vtkITKArchetypeImageSeriesReader.h.

SetGroupingByTagsOn()

void vtkITKArchetypeImageSeriesReader::SetGroupingByTagsOn ( )

inline

Definition at line 281 of file vtkITKArchetypeImageSeriesReader.h.

SetMetaDataScalarRangeToPointDataInfo()

void vtkITKArchetypeImageSeriesReader::SetMetaDataScalarRangeToPointDataInfo ( vtkImageData * data )

protected

SetNumberOfComponents()

virtual void vtkITKArchetypeImageSeriesReader::SetNumberOfComponents ( unsigned int )

virtual

Get number of scalars.

SetOutputScalarType()

virtual void vtkITKArchetypeImageSeriesReader::SetOutputScalarType ( int )

virtual

Get the file format. Pixels are this type in the file.

SetOutputScalarTypeToChar()

virtual void vtkITKArchetypeImageSeriesReader::SetOutputScalarTypeToChar ( )

inlinevirtual

Definition at line 192 of file vtkITKArchetypeImageSeriesReader.h.

SetOutputScalarTypeToDouble()

virtual void vtkITKArchetypeImageSeriesReader::SetOutputScalarTypeToDouble ( )

inlinevirtual

Set the data type of pixels in the file. If you want the output scalar type to have a different value, set it after this method is called.

Definition at line 152 of file vtkITKArchetypeImageSeriesReader.h.

SetOutputScalarTypeToFloat()

virtual void vtkITKArchetypeImageSeriesReader::SetOutputScalarTypeToFloat ( )

inlinevirtual

Definition at line 157 of file vtkITKArchetypeImageSeriesReader.h.

SetOutputScalarTypeToInt()

virtual void vtkITKArchetypeImageSeriesReader::SetOutputScalarTypeToInt ( )

inlinevirtual

Definition at line 172 of file vtkITKArchetypeImageSeriesReader.h.

SetOutputScalarTypeToLong()

virtual void vtkITKArchetypeImageSeriesReader::SetOutputScalarTypeToLong ( )

inlinevirtual

Definition at line 162 of file vtkITKArchetypeImageSeriesReader.h.

SetOutputScalarTypeToNative()

virtual void vtkITKArchetypeImageSeriesReader::SetOutputScalarTypeToNative ( )

inlinevirtual

Definition at line 202 of file vtkITKArchetypeImageSeriesReader.h.

SetOutputScalarTypeToShort()

virtual void vtkITKArchetypeImageSeriesReader::SetOutputScalarTypeToShort ( )

inlinevirtual

Definition at line 182 of file vtkITKArchetypeImageSeriesReader.h.

SetOutputScalarTypeToUnsignedChar()

virtual void vtkITKArchetypeImageSeriesReader::SetOutputScalarTypeToUnsignedChar ( )

inlinevirtual

Definition at line 197 of file vtkITKArchetypeImageSeriesReader.h.

SetOutputScalarTypeToUnsignedInt()

virtual void vtkITKArchetypeImageSeriesReader::SetOutputScalarTypeToUnsignedInt ( )

inlinevirtual

Definition at line 177 of file vtkITKArchetypeImageSeriesReader.h.

SetOutputScalarTypeToUnsignedLong()

virtual void vtkITKArchetypeImageSeriesReader::SetOutputScalarTypeToUnsignedLong ( )

inlinevirtual

Definition at line 167 of file vtkITKArchetypeImageSeriesReader.h.

SetOutputScalarTypeToUnsignedShort()

virtual void vtkITKArchetypeImageSeriesReader::SetOutputScalarTypeToUnsignedShort ( )

inlinevirtual

Definition at line 187 of file vtkITKArchetypeImageSeriesReader.h.

SetSelectedContentTime()

void vtkITKArchetypeImageSeriesReader::SetSelectedContentTime ( int v )

inline

Definition at line 297 of file vtkITKArchetypeImageSeriesReader.h.

SetSelectedDiffusion()

void vtkITKArchetypeImageSeriesReader::SetSelectedDiffusion ( int v )

inline

Definition at line 324 of file vtkITKArchetypeImageSeriesReader.h.

SetSelectedEchoNumbers()

void vtkITKArchetypeImageSeriesReader::SetSelectedEchoNumbers ( int v )

inline

Definition at line 315 of file vtkITKArchetypeImageSeriesReader.h.

SetSelectedOrientation()

void vtkITKArchetypeImageSeriesReader::SetSelectedOrientation ( int v )

inline

Definition at line 342 of file vtkITKArchetypeImageSeriesReader.h.

SetSelectedSlice()

void vtkITKArchetypeImageSeriesReader::SetSelectedSlice ( int v )

inline

Definition at line 333 of file vtkITKArchetypeImageSeriesReader.h.

SetSelectedTriggerTime()

void vtkITKArchetypeImageSeriesReader::SetSelectedTriggerTime ( int v )

inline

Definition at line 306 of file vtkITKArchetypeImageSeriesReader.h.

SetSelectedUID()

void vtkITKArchetypeImageSeriesReader::SetSelectedUID ( int v )

inline

Definition at line 288 of file vtkITKArchetypeImageSeriesReader.h.

SetSingleFile()

virtual void vtkITKArchetypeImageSeriesReader::SetSingleFile ( int )

virtual

Whether load in a single file or a series.

SetUseNativeOriginOff()

void vtkITKArchetypeImageSeriesReader::SetUseNativeOriginOff ( )

inline

Use image center as origin.

Definition at line 214 of file vtkITKArchetypeImageSeriesReader.h.

SetUseNativeOriginOn()

void vtkITKArchetypeImageSeriesReader::SetUseNativeOriginOn ( )

inline

Use image origin from the file.

Definition at line 210 of file vtkITKArchetypeImageSeriesReader.h.

SetUseOrientationFromFile()

virtual void vtkITKArchetypeImageSeriesReader::SetUseOrientationFromFile ( int )

virtual

Whether to use orientation from file.

SetVoxelVectorType()

virtual void vtkITKArchetypeImageSeriesReader::SetVoxelVectorType ( int )

virtual

Defines how to interpret voxel components.

Member Data Documentation

AllFileNames

std::vector<std::string> vtkITKArchetypeImageSeriesReader::AllFileNames

protected

The following variables provide support for reading a directory with multiple series/groups. The current scheme is to check the following and see if multiple values exist:

SeriesInstanceUID 0020,000E ContentTime 0008,0033 TriggerTime 0018,1060 EchoNumbers 0018,0086 DiffusionGradientOrientation 0018,9089 SliceLocation 0020,1041 ImageOrientationPatient 0020,0037 ImagePositionPatient 0020,0032

Definition at line 830 of file vtkITKArchetypeImageSeriesReader.h.

AnalyzeHeader

bool vtkITKArchetypeImageSeriesReader::AnalyzeHeader

protected

Definition at line 831 of file vtkITKArchetypeImageSeriesReader.h.

Archetype

char* vtkITKArchetypeImageSeriesReader::Archetype

protected

Definition at line 767 of file vtkITKArchetypeImageSeriesReader.h.

ArchetypeIsDICOM

bool vtkITKArchetypeImageSeriesReader::ArchetypeIsDICOM

protected

Definition at line 833 of file vtkITKArchetypeImageSeriesReader.h.

ContentTime

std::vector<std::string> vtkITKArchetypeImageSeriesReader::ContentTime

protected

Definition at line 836 of file vtkITKArchetypeImageSeriesReader.h.

DataExtent

int vtkITKArchetypeImageSeriesReader::DataExtent[6]

protected

Definition at line 770 of file vtkITKArchetypeImageSeriesReader.h.

DefaultDataOrigin

double vtkITKArchetypeImageSeriesReader::DefaultDataOrigin[3]

protected

Definition at line 781 of file vtkITKArchetypeImageSeriesReader.h.

DefaultDataSpacing

double vtkITKArchetypeImageSeriesReader::DefaultDataSpacing[3]

protected

Definition at line 780 of file vtkITKArchetypeImageSeriesReader.h.

DesiredCoordinateOrientation

CoordinateOrientationCode vtkITKArchetypeImageSeriesReader::DesiredCoordinateOrientation

protected

Definition at line 811 of file vtkITKArchetypeImageSeriesReader.h.

DICOMImageIOApproach

int vtkITKArchetypeImageSeriesReader::DICOMImageIOApproach

protected

Definition at line 796 of file vtkITKArchetypeImageSeriesReader.h.

Dictionary

itk::MetaDataDictionary vtkITKArchetypeImageSeriesReader::Dictionary

protected

Definition at line 814 of file vtkITKArchetypeImageSeriesReader.h.

DiffusionGradientOrientation

std::vector<std::vector<float> > vtkITKArchetypeImageSeriesReader::DiffusionGradientOrientation

protected

Definition at line 839 of file vtkITKArchetypeImageSeriesReader.h.

EchoNumbers

std::vector<std::string> vtkITKArchetypeImageSeriesReader::EchoNumbers

protected

Definition at line 838 of file vtkITKArchetypeImageSeriesReader.h.

FileNames

std::vector<std::string> vtkITKArchetypeImageSeriesReader::FileNames

protected

Definition at line 809 of file vtkITKArchetypeImageSeriesReader.h.

FileNameSliceCount

int vtkITKArchetypeImageSeriesReader::FileNameSliceCount

protected

Definition at line 787 of file vtkITKArchetypeImageSeriesReader.h.

FileNameSliceKey

std::vector<std::pair<double, int> > vtkITKArchetypeImageSeriesReader::FileNameSliceKey

protected

Definition at line 810 of file vtkITKArchetypeImageSeriesReader.h.

FileNameSliceOffset

int vtkITKArchetypeImageSeriesReader::FileNameSliceOffset

protected

Definition at line 785 of file vtkITKArchetypeImageSeriesReader.h.

FileNameSliceSpacing

int vtkITKArchetypeImageSeriesReader::FileNameSliceSpacing

protected

Definition at line 786 of file vtkITKArchetypeImageSeriesReader.h.

GroupingByTags

bool vtkITKArchetypeImageSeriesReader::GroupingByTags

protected

Definition at line 798 of file vtkITKArchetypeImageSeriesReader.h.

ImageOrientationPatient

std::vector<std::vector<float> > vtkITKArchetypeImageSeriesReader::ImageOrientationPatient

protected

Definition at line 841 of file vtkITKArchetypeImageSeriesReader.h.

ImagePositionPatient

std::vector<std::vector<float> > vtkITKArchetypeImageSeriesReader::ImagePositionPatient

protected

Definition at line 842 of file vtkITKArchetypeImageSeriesReader.h.

IndexArchetype

unsigned int vtkITKArchetypeImageSeriesReader::IndexArchetype

protected

Definition at line 807 of file vtkITKArchetypeImageSeriesReader.h.

IndexContentTime

std::vector<long int> vtkITKArchetypeImageSeriesReader::IndexContentTime

protected

Definition at line 846 of file vtkITKArchetypeImageSeriesReader.h.

IndexDiffusionGradientOrientation

std::vector<long int> vtkITKArchetypeImageSeriesReader::IndexDiffusionGradientOrientation

protected

Definition at line 849 of file vtkITKArchetypeImageSeriesReader.h.

IndexEchoNumbers

std::vector<long int> vtkITKArchetypeImageSeriesReader::IndexEchoNumbers

protected

Definition at line 848 of file vtkITKArchetypeImageSeriesReader.h.

IndexImageOrientationPatient

std::vector<long int> vtkITKArchetypeImageSeriesReader::IndexImageOrientationPatient

protected

Definition at line 851 of file vtkITKArchetypeImageSeriesReader.h.

IndexImagePositionPatient

std::vector<long int> vtkITKArchetypeImageSeriesReader::IndexImagePositionPatient

protected

Definition at line 852 of file vtkITKArchetypeImageSeriesReader.h.

IndexSeriesInstanceUIDs

std::vector<long int> vtkITKArchetypeImageSeriesReader::IndexSeriesInstanceUIDs

protected

index of each dicom file into the above arrays

Definition at line 845 of file vtkITKArchetypeImageSeriesReader.h.

IndexSliceLocation

std::vector<long int> vtkITKArchetypeImageSeriesReader::IndexSliceLocation

protected

Definition at line 850 of file vtkITKArchetypeImageSeriesReader.h.

IndexTriggerTime

std::vector<long int> vtkITKArchetypeImageSeriesReader::IndexTriggerTime

protected

Definition at line 847 of file vtkITKArchetypeImageSeriesReader.h.

IsOnlyFile

bool vtkITKArchetypeImageSeriesReader::IsOnlyFile

protected

Definition at line 832 of file vtkITKArchetypeImageSeriesReader.h.

MeasurementFrameMatrix

vtkMatrix4x4* vtkITKArchetypeImageSeriesReader::MeasurementFrameMatrix

protected

Definition at line 790 of file vtkITKArchetypeImageSeriesReader.h.

MetaDataScalarRangeMaxima

std::vector<double> vtkITKArchetypeImageSeriesReader::MetaDataScalarRangeMaxima

protected

Definition at line 776 of file vtkITKArchetypeImageSeriesReader.h.

MetaDataScalarRangeMinima

std::vector<double> vtkITKArchetypeImageSeriesReader::MetaDataScalarRangeMinima

protected

Definition at line 775 of file vtkITKArchetypeImageSeriesReader.h.

NumberOfComponents

unsigned int vtkITKArchetypeImageSeriesReader::NumberOfComponents

protected

Definition at line 773 of file vtkITKArchetypeImageSeriesReader.h.

OutputScalarType

int vtkITKArchetypeImageSeriesReader::OutputScalarType

protected

Definition at line 772 of file vtkITKArchetypeImageSeriesReader.h.

RasToIjkMatrix

vtkMatrix4x4* vtkITKArchetypeImageSeriesReader::RasToIjkMatrix

protected

Definition at line 789 of file vtkITKArchetypeImageSeriesReader.h.

ScanAxis

float vtkITKArchetypeImageSeriesReader::ScanAxis[3]

protected

Definition at line 782 of file vtkITKArchetypeImageSeriesReader.h.

ScanOrigin

float vtkITKArchetypeImageSeriesReader::ScanOrigin[3]

protected

Definition at line 783 of file vtkITKArchetypeImageSeriesReader.h.

SelectedContentTime

int vtkITKArchetypeImageSeriesReader::SelectedContentTime

protected

Definition at line 800 of file vtkITKArchetypeImageSeriesReader.h.

SelectedDiffusion

int vtkITKArchetypeImageSeriesReader::SelectedDiffusion

protected

Definition at line 803 of file vtkITKArchetypeImageSeriesReader.h.

SelectedEchoNumbers

int vtkITKArchetypeImageSeriesReader::SelectedEchoNumbers

protected

Definition at line 802 of file vtkITKArchetypeImageSeriesReader.h.

SelectedOrientation

int vtkITKArchetypeImageSeriesReader::SelectedOrientation

protected

Definition at line 805 of file vtkITKArchetypeImageSeriesReader.h.

SelectedSlice

int vtkITKArchetypeImageSeriesReader::SelectedSlice

protected

Definition at line 804 of file vtkITKArchetypeImageSeriesReader.h.

SelectedTriggerTime

int vtkITKArchetypeImageSeriesReader::SelectedTriggerTime

protected

Definition at line 801 of file vtkITKArchetypeImageSeriesReader.h.

SelectedUID

int vtkITKArchetypeImageSeriesReader::SelectedUID

protected

Definition at line 799 of file vtkITKArchetypeImageSeriesReader.h.

SeriesInstanceUIDs

std::vector<std::string> vtkITKArchetypeImageSeriesReader::SeriesInstanceUIDs

protected

Definition at line 835 of file vtkITKArchetypeImageSeriesReader.h.

SingleFile

int vtkITKArchetypeImageSeriesReader::SingleFile

protected

Definition at line 768 of file vtkITKArchetypeImageSeriesReader.h.

SliceLocation

std::vector<float> vtkITKArchetypeImageSeriesReader::SliceLocation

protected

Definition at line 840 of file vtkITKArchetypeImageSeriesReader.h.

Tags

std::vector<std::string> vtkITKArchetypeImageSeriesReader::Tags

Definition at line 268 of file vtkITKArchetypeImageSeriesReader.h.

TagValues

std::vector<std::string> vtkITKArchetypeImageSeriesReader::TagValues

Definition at line 269 of file vtkITKArchetypeImageSeriesReader.h.

TriggerTime

std::vector<std::string> vtkITKArchetypeImageSeriesReader::TriggerTime

protected

Definition at line 837 of file vtkITKArchetypeImageSeriesReader.h.

UseNativeCoordinateOrientation

char vtkITKArchetypeImageSeriesReader::UseNativeCoordinateOrientation

protected

Definition at line 792 of file vtkITKArchetypeImageSeriesReader.h.

UseNativeOrigin

bool vtkITKArchetypeImageSeriesReader::UseNativeOrigin

protected

Definition at line 794 of file vtkITKArchetypeImageSeriesReader.h.

UseNativeScalarType

char vtkITKArchetypeImageSeriesReader::UseNativeScalarType

protected

Definition at line 793 of file vtkITKArchetypeImageSeriesReader.h.

UseOrientationFromFile

int vtkITKArchetypeImageSeriesReader::UseOrientationFromFile

protected

Definition at line 769 of file vtkITKArchetypeImageSeriesReader.h.

VoxelVectorType

int vtkITKArchetypeImageSeriesReader::VoxelVectorType

protected

Definition at line 854 of file vtkITKArchetypeImageSeriesReader.h.

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The documentation for this class was generated from the following file:

• Libs/vtkITK/vtkITKArchetypeImageSeriesReader.h