SegmentEditorEffects.SegmentEditorSmoothingEffect.SegmentEditorSmoothingEffect Class Reference

Inheritance diagram for SegmentEditorEffects.SegmentEditorSmoothingEffect.SegmentEditorSmoothingEffect:

Collaboration diagram for SegmentEditorEffects.SegmentEditorSmoothingEffect.SegmentEditorSmoothingEffect:

Public Member Functions
	__init__ (self, scriptedEffect)
	clipImage (self, inputImage, maskExtent, margin)
	clone (self)
	getKernelSizePixel (self)
	helpText (self)
	icon (self)
	modifySelectedSegmentByLabelmap (self, smoothedImage, selectedSegmentLabelmap, modifierLabelmap, maskImage, maskExtent)
	onApply (self, maskImage=None, maskExtent=None)
	paintApply (self, viewWidget)
	setMRMLDefaults (self)
	setupOptionsFrame (self)
	showStatusMessage (self, msg, timeoutMsec=500)
	smoothMultipleSegments (self, maskImage=None, maskExtent=None)
	smoothSelectedSegment (self, maskImage=None, maskExtent=None)
	updateGUIFromMRML (self)
	updateMRMLFromGUI (self)
	updateParameterWidgetsVisibility (self)
Public Member Functions inherited from SegmentEditorEffects.AbstractScriptedSegmentEditorPaintEffect.AbstractScriptedSegmentEditorPaintEffect
	__init__ (self, scriptedEffect)
Public Member Functions inherited from SegmentEditorEffects.AbstractScriptedSegmentEditorEffect.AbstractScriptedSegmentEditorEffect
	__init__ (self, scriptedEffect)
	cleanup (self)
	rasToXy (self, ras, viewWidget)
	register (self)
	setWidgetMinMaxStepFromImageSpacing (self, spinbox, imageData)
	xyToIjk (self, xy, viewWidget, image, parentTransformNode=None)
	xyToRas (self, xy, viewWidget)
	xyzToIjk (self, xyz, viewWidget, image, parentTransformNode=None)
	xyzToRas (self, xyz, viewWidget)

Public Attributes
	applyButton = qt.QPushButton(_("Apply"))
	applyToAllVisibleSegmentsCheckBox = qt.QCheckBox()
	applyToAllVisibleSegmentsLabel
	gaussianStandardDeviationMMLabel = self.scriptedEffect.addLabeledOptionsWidget(_("Standard deviation:"), self.gaussianStandardDeviationMMSpinBox)
	gaussianStandardDeviationMMSpinBox = slicer.qMRMLSpinBox()
	jointTaubinSmoothingFactorLabel = self.scriptedEffect.addLabeledOptionsWidget(_("Smoothing factor:"), self.jointTaubinSmoothingFactorSlider)
	jointTaubinSmoothingFactorSlider = ctk.ctkSliderWidget()
	kernelSizeMMLabel = self.scriptedEffect.addLabeledOptionsWidget(_("Kernel size:"), kernelSizeFrame)
	kernelSizeMMSpinBox = slicer.qMRMLSpinBox()
	kernelSizePixel = qt.QLabel()
	methodSelectorComboBox = qt.QComboBox()
	onApply
	paintOptionsGroupBox = ctk.ctkCollapsibleGroupBox()
	updateMRMLFromGUI
Public Attributes inherited from SegmentEditorEffects.AbstractScriptedSegmentEditorEffect.AbstractScriptedSegmentEditorEffect
	scriptedEffect = scriptedEffect

Detailed Description

SmoothingEffect is an Effect that smoothes a selected segment

Definition at line 14 of file SegmentEditorSmoothingEffect.py.

Constructor & Destructor Documentation

__init__()

SegmentEditorEffects.SegmentEditorSmoothingEffect.SegmentEditorSmoothingEffect.__init__	(		self,
			scriptedEffect )

Definition at line 17 of file SegmentEditorSmoothingEffect.py.

Member Function Documentation

clipImage()

SegmentEditorEffects.SegmentEditorSmoothingEffect.SegmentEditorSmoothingEffect.clipImage	(		self,
			inputImage,
			maskExtent,
			margin )

Definition at line 241 of file SegmentEditorSmoothingEffect.py.

clone()

SegmentEditorEffects.SegmentEditorSmoothingEffect.SegmentEditorSmoothingEffect.clone

(

self

)

Definition at line 22 of file SegmentEditorSmoothingEffect.py.

getKernelSizePixel()

SegmentEditorEffects.SegmentEditorSmoothingEffect.SegmentEditorSmoothingEffect.getKernelSizePixel

(

self

)

Definition at line 140 of file SegmentEditorSmoothingEffect.py.

helpText()

SegmentEditorEffects.SegmentEditorSmoothingEffect.SegmentEditorSmoothingEffect.helpText

(

self

)

Definition at line 35 of file SegmentEditorSmoothingEffect.py.

icon()

SegmentEditorEffects.SegmentEditorSmoothingEffect.SegmentEditorSmoothingEffect.icon

(

self

)

Definition at line 29 of file SegmentEditorSmoothingEffect.py.

modifySelectedSegmentByLabelmap()

SegmentEditorEffects.SegmentEditorSmoothingEffect.SegmentEditorSmoothingEffect.modifySelectedSegmentByLabelmap	(		self,
			smoothedImage,
			selectedSegmentLabelmap,
			modifierLabelmap,
			maskImage,
			maskExtent )

Definition at line 254 of file SegmentEditorSmoothingEffect.py.

onApply()

SegmentEditorEffects.SegmentEditorSmoothingEffect.SegmentEditorSmoothingEffect.onApply	(		self,
			maskImage = None,
			maskExtent = None )

maskImage: contains nonzero where smoothing will be applied

Definition at line 200 of file SegmentEditorSmoothingEffect.py.

paintApply()

SegmentEditorEffects.SegmentEditorSmoothingEffect.SegmentEditorSmoothingEffect.paintApply	(		self,
			viewWidget )

Definition at line 472 of file SegmentEditorSmoothingEffect.py.

setMRMLDefaults()

SegmentEditorEffects.SegmentEditorSmoothingEffect.SegmentEditorSmoothingEffect.setMRMLDefaults

(

self

)

Definition at line 119 of file SegmentEditorSmoothingEffect.py.

setupOptionsFrame()

SegmentEditorEffects.SegmentEditorSmoothingEffect.SegmentEditorSmoothingEffect.setupOptionsFrame

(

self

)

Definition at line 47 of file SegmentEditorSmoothingEffect.py.

showStatusMessage()

SegmentEditorEffects.SegmentEditorSmoothingEffect.SegmentEditorSmoothingEffect.showStatusMessage	(		self,
			msg,
			timeoutMsec = 500 )

Definition at line 196 of file SegmentEditorSmoothingEffect.py.

smoothMultipleSegments()

SegmentEditorEffects.SegmentEditorSmoothingEffect.SegmentEditorSmoothingEffect.smoothMultipleSegments	(		self,
			maskImage = None,
			maskExtent = None )

Definition at line 369 of file SegmentEditorSmoothingEffect.py.

smoothSelectedSegment()

SegmentEditorEffects.SegmentEditorSmoothingEffect.SegmentEditorSmoothingEffect.smoothSelectedSegment	(		self,
			maskImage = None,
			maskExtent = None )

Definition at line 282 of file SegmentEditorSmoothingEffect.py.

updateGUIFromMRML()

SegmentEditorEffects.SegmentEditorSmoothingEffect.SegmentEditorSmoothingEffect.updateGUIFromMRML

(

self

)

Definition at line 151 of file SegmentEditorSmoothingEffect.py.

updateMRMLFromGUI()

SegmentEditorEffects.SegmentEditorSmoothingEffect.SegmentEditorSmoothingEffect.updateMRMLFromGUI

(

self

)

Definition at line 180 of file SegmentEditorSmoothingEffect.py.

updateParameterWidgetsVisibility()

SegmentEditorEffects.SegmentEditorSmoothingEffect.SegmentEditorSmoothingEffect.updateParameterWidgetsVisibility

(

self

)

Definition at line 126 of file SegmentEditorSmoothingEffect.py.

Member Data Documentation

applyButton

SegmentEditorEffects.SegmentEditorSmoothingEffect.SegmentEditorSmoothingEffect.applyButton = qt.QPushButton(_("Apply"))

Definition at line 98 of file SegmentEditorSmoothingEffect.py.

applyToAllVisibleSegmentsCheckBox

SegmentEditorEffects.SegmentEditorSmoothingEffect.SegmentEditorSmoothingEffect.applyToAllVisibleSegmentsCheckBox = qt.QCheckBox()

Definition at line 91 of file SegmentEditorSmoothingEffect.py.

applyToAllVisibleSegmentsLabel

SegmentEditorEffects.SegmentEditorSmoothingEffect.SegmentEditorSmoothingEffect.applyToAllVisibleSegmentsLabel

Initial value:

=  self.scriptedEffect.addLabeledOptionsWidget(_("Apply to visible segments:"),
                                                                                          self.applyToAllVisibleSegmentsCheckBox)

Definition at line 95 of file SegmentEditorSmoothingEffect.py.

gaussianStandardDeviationMMLabel

SegmentEditorEffects.SegmentEditorSmoothingEffect.SegmentEditorSmoothingEffect.gaussianStandardDeviationMMLabel = self.scriptedEffect.addLabeledOptionsWidget(_("Standard deviation:"), self.gaussianStandardDeviationMMSpinBox)

Definition at line 80 of file SegmentEditorSmoothingEffect.py.

gaussianStandardDeviationMMSpinBox

SegmentEditorEffects.SegmentEditorSmoothingEffect.SegmentEditorSmoothingEffect.gaussianStandardDeviationMMSpinBox = slicer.qMRMLSpinBox()

Definition at line 73 of file SegmentEditorSmoothingEffect.py.

jointTaubinSmoothingFactorLabel

SegmentEditorEffects.SegmentEditorSmoothingEffect.SegmentEditorSmoothingEffect.jointTaubinSmoothingFactorLabel = self.scriptedEffect.addLabeledOptionsWidget(_("Smoothing factor:"), self.jointTaubinSmoothingFactorSlider)

Definition at line 89 of file SegmentEditorSmoothingEffect.py.

jointTaubinSmoothingFactorSlider

SegmentEditorEffects.SegmentEditorSmoothingEffect.SegmentEditorSmoothingEffect.jointTaubinSmoothingFactorSlider = ctk.ctkSliderWidget()

Definition at line 82 of file SegmentEditorSmoothingEffect.py.

kernelSizeMMLabel

SegmentEditorEffects.SegmentEditorSmoothingEffect.SegmentEditorSmoothingEffect.kernelSizeMMLabel = self.scriptedEffect.addLabeledOptionsWidget(_("Kernel size:"), kernelSizeFrame)

Definition at line 71 of file SegmentEditorSmoothingEffect.py.

kernelSizeMMSpinBox

SegmentEditorEffects.SegmentEditorSmoothingEffect.SegmentEditorSmoothingEffect.kernelSizeMMSpinBox = slicer.qMRMLSpinBox()

Definition at line 56 of file SegmentEditorSmoothingEffect.py.

kernelSizePixel

SegmentEditorEffects.SegmentEditorSmoothingEffect.SegmentEditorSmoothingEffect.kernelSizePixel = qt.QLabel()

Definition at line 65 of file SegmentEditorSmoothingEffect.py.

methodSelectorComboBox

SegmentEditorEffects.SegmentEditorSmoothingEffect.SegmentEditorSmoothingEffect.methodSelectorComboBox = qt.QComboBox()

Definition at line 48 of file SegmentEditorSmoothingEffect.py.

onApply

SegmentEditorEffects.SegmentEditorSmoothingEffect.SegmentEditorSmoothingEffect.onApply

Definition at line 108 of file SegmentEditorSmoothingEffect.py.

paintOptionsGroupBox

SegmentEditorEffects.SegmentEditorSmoothingEffect.SegmentEditorSmoothingEffect.paintOptionsGroupBox = ctk.ctkCollapsibleGroupBox()

Definition at line 112 of file SegmentEditorSmoothingEffect.py.

updateMRMLFromGUI

SegmentEditorEffects.SegmentEditorSmoothingEffect.SegmentEditorSmoothingEffect.updateMRMLFromGUI

Definition at line 103 of file SegmentEditorSmoothingEffect.py.

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The documentation for this class was generated from the following file:

• Modules/Loadable/Segmentations/EditorEffects/Python/SegmentEditorEffects/SegmentEditorSmoothingEffect.py