itk::RigidImageToImageRegistrationMethod< TImage > Class Template Reference

#include <Modules/CLI/ExpertAutomatedRegistration/ITKRegistrationHelper/itkRigidImageToImageRegistrationMethod.h>

Inheritance diagram for itk::RigidImageToImageRegistrationMethod< TImage >:

Collaboration diagram for itk::RigidImageToImageRegistrationMethod< TImage >:

Public Types
typedef AffineTransformType::Pointer	AffineTransformPointer
typedef AffineTransform< double, itkGetStaticConstMacro(ImageDimension)>	AffineTransformType
typedef SmartPointer< const Self >	ConstPointer
typedef SmartPointer< Self >	Pointer
typedef Rigid2DTransform< double >	Rigid2DTransformType
typedef VersorRigid3DTransform< double >	Rigid3DTransformType
typedef MatrixOffsetTransformBase< double, itkGetStaticConstMacro(ImageDimension), itkGetStaticConstMacro(ImageDimension)>	RigidTransformType
typedef RigidImageToImageRegistrationMethod	Self
typedef OptimizedImageToImageRegistrationMethod< TImage >	Superclass
typedef RigidTransformType	TransformType
Public Types inherited from itk::OptimizedImageToImageRegistrationMethod< TImage >
typedef SmartPointer< const Self >	ConstPointer
typedef TImage	ImageType
enum	InterpolationMethodEnumType { NEAREST_NEIGHBOR_INTERPOLATION, LINEAR_INTERPOLATION, BSPLINE_INTERPOLATION, SINC_INTERPOLATION }
enum	MetricMethodEnumType { MATTES_MI_METRIC, NORMALIZED_CORRELATION_METRIC, MEAN_SQUARED_ERROR_METRIC }
typedef ImageType::PixelType	PixelType
typedef SmartPointer< Self >	Pointer
typedef OptimizedImageToImageRegistrationMethod	Self
typedef ImageToImageRegistrationMethod< TImage >	Superclass
enum	TransformMethodEnumType { RIGID_TRANSFORM, AFFINE_TRANSFORM, BSPLINE_TRANSFORM }
typedef TransformType::ParametersType	TransformParametersScalesType
typedef TransformType::ParametersType	TransformParametersType
typedef Superclass::TransformType	TransformType
Public Types inherited from itk::ImageToImageRegistrationMethod< TImage >
typedef SmartPointer< const Self >	ConstPointer
typedef DataObject::Pointer	DataObjectPointer
typedef Superclass::DataObjectPointerArraySizeType	DataObjectPointerArraySizeType
typedef TImage	ImageType
typedef SpatialObject< itkGetStaticConstMacro(ImageDimension)>	MaskObjectType
typedef SmartPointer< Self >	Pointer
typedef TImage::PointType	PointType
typedef ImageToImageRegistrationMethod	Self
typedef ProcessObject	Superclass
typedef DataObjectDecorator< TransformType >	TransformOutputType
typedef Transform< double, itkGetStaticConstMacro(ImageDimension), itkGetStaticConstMacro(ImageDimension)>	TransformType

Public Member Functions
void	GenerateData (void) ITK_OVERRIDE
AffineTransformPointer	GetAffineTransform (void) const
TransformType *	GetTypedTransform (void)
const TransformType *	GetTypedTransform (void) const
	itkNewMacro (Self)
	itkStaticConstMacro (ImageDimension, unsigned int, TImage::ImageDimension)
	itkTypeMacro (RigidImageToImageRegistrationMethod, OptimizedImageToImageRegistrationMethod)
void	SetInitialTransformParametersFromAffineTransform (const AffineTransformType *affine)
Public Member Functions inherited from itk::OptimizedImageToImageRegistrationMethod< TImage >
	itkGetConstMacro (InitialTransformParameters, TransformParametersType)
	itkGetConstMacro (InitialTransformFixedParameters, TransformParametersType)
	itkGetConstMacro (LastTransformParameters, TransformParametersType)
	itkGetConstMacro (TransformParametersScales, TransformParametersScalesType)
	itkGetConstMacro (SampleFromOverlap, bool)
	itkGetConstMacro (MinimizeMemory, bool)
	itkGetConstMacro (MaxIterations, unsigned int)
	itkGetConstMacro (UseEvolutionaryOptimization, bool)
	itkGetConstMacro (NumberOfSamples, unsigned int)
	itkGetConstMacro (UseFixedImageSamplesIntensityThreshold, bool)
	itkGetConstMacro (FixedImageSamplesIntensityThreshold, PixelType)
	itkGetConstMacro (TargetError, double)
	itkGetConstMacro (RandomNumberSeed, int)
	itkGetConstMacro (TransformMethodEnum, TransformMethodEnumType)
	itkGetConstMacro (MetricMethodEnum, MetricMethodEnumType)
	itkGetConstMacro (InterpolationMethodEnum, InterpolationMethodEnumType)
	itkGetMacro (FinalMetricValue, double)
	itkNewMacro (Self)
	itkSetMacro (InitialTransformParameters, TransformParametersType)
	itkSetMacro (InitialTransformFixedParameters, TransformParametersType)
	itkSetMacro (LastTransformParameters, TransformParametersType)
	itkSetMacro (TransformParametersScales, TransformParametersScalesType)
	itkSetMacro (SampleFromOverlap, bool)
	itkSetMacro (MinimizeMemory, bool)
	itkSetMacro (MaxIterations, unsigned int)
	itkSetMacro (UseEvolutionaryOptimization, bool)
	itkSetMacro (NumberOfSamples, unsigned int)
	itkSetMacro (UseFixedImageSamplesIntensityThreshold, bool)
	itkSetMacro (TargetError, double)
	itkSetMacro (RandomNumberSeed, int)
	itkSetMacro (MetricMethodEnum, MetricMethodEnumType)
	itkSetMacro (InterpolationMethodEnum, InterpolationMethodEnumType)
	itkStaticConstMacro (ImageDimension, unsigned int, TImage::ImageDimension)
	itkTypeMacro (OptimizedImageToImageRegistrationMethod, ImageToImageRegistrationMethod)
void	SetFixedImageSamplesIntensityThreshold (PixelType val)
Public Member Functions inherited from itk::ImageToImageRegistrationMethod< TImage >
const TransformOutputType *	GetOutput (void) const
	itkBooleanMacro (ReportProgress)
	itkGetConstObjectMacro (FixedImage, ImageType)
	itkGetConstObjectMacro (MovingImage, ImageType)
	itkGetConstObjectMacro (FixedImageMaskObject, MaskObjectType)
	itkGetConstObjectMacro (MovingImageMaskObject, MaskObjectType)
	itkGetMacro (RegistrationNumberOfThreads, unsigned int)
	itkGetMacro (UseRegionOfInterest, bool)
	itkGetMacro (RegionOfInterestPoint1, PointType)
	itkGetMacro (RegionOfInterestPoint2, PointType)
	itkGetMacro (UseFixedImageMaskObject, bool)
	itkGetMacro (UseMovingImageMaskObject, bool)
	itkGetMacro (ReportProgress, bool)
	itkGetObjectMacro (Observer, Command)
	itkNewMacro (Self)
	itkSetMacro (RegistrationNumberOfThreads, unsigned int)
	itkSetMacro (UseRegionOfInterest, bool)
	itkSetMacro (RegionOfInterestPoint1, PointType)
	itkSetMacro (RegionOfInterestPoint2, PointType)
	itkSetMacro (UseFixedImageMaskObject, bool)
	itkSetMacro (UseMovingImageMaskObject, bool)
	itkSetMacro (ReportProgress, bool)
	itkSetObjectMacro (Observer, Command)
	itkStaticConstMacro (ImageDimension, unsigned int, TImage::ImageDimension)
	itkTypeMacro (ImageToImageRegistrationMethod, ProcessObject)
void	SetFixedImage (const ImageType *fixedImage)
void	SetFixedImageMaskObject (const MaskObjectType *maskObject)
void	SetMovingImage (const ImageType *movingImage)
void	SetMovingImageMaskObject (const MaskObjectType *maskObject)
void	SetRegionOfInterest (const PointType &point1, const PointType &point2)

Protected Member Functions
void	PrintSelf (std::ostream &os, Indent indent) const ITK_OVERRIDE
	RigidImageToImageRegistrationMethod (void)
virtual	~RigidImageToImageRegistrationMethod (void)
Protected Member Functions inherited from itk::OptimizedImageToImageRegistrationMethod< TImage >
	itkSetMacro (FinalMetricValue, double)
	itkSetMacro (TransformMethodEnum, TransformMethodEnumType)
virtual void	Optimize (MetricType *metric, InterpolatorType *interpolator)
	OptimizedImageToImageRegistrationMethod (void)
virtual	~OptimizedImageToImageRegistrationMethod (void)
Protected Member Functions inherited from itk::ImageToImageRegistrationMethod< TImage >
void	GenerateData (void) ITK_OVERRIDE
unsigned long	GetMTime (void) const ITK_OVERRIDE
	ImageToImageRegistrationMethod (void)
virtual void	Initialize (void)
	itkGetConstObjectMacro (Transform, TransformType)
	itkGetObjectMacro (Transform, TransformType)
	itkSetObjectMacro (Transform, TransformType)
virtual DataObjectPointer	MakeOutput (DataObjectPointerArraySizeType idx) ITK_OVERRIDE
void	PrintSelf (std::ostream &os, Indent indent) const ITK_OVERRIDE
virtual	~ImageToImageRegistrationMethod (void)

Additional Inherited Members
Protected Types inherited from itk::OptimizedImageToImageRegistrationMethod< TImage >
typedef InterpolateImageFunction< TImage, double >	InterpolatorType
typedef ImageToImageMetric< TImage, TImage >	MetricType
Protected Attributes inherited from itk::ImageToImageRegistrationMethod< TImage >
TransformType::Pointer	m_Transform

Detailed Description

template<class TImage>
class itk::RigidImageToImageRegistrationMethod< TImage >

Definition at line 32 of file itkRigidImageToImageRegistrationMethod.h.

Member Typedef Documentation

AffineTransformPointer

template<class TImage >

typedef AffineTransformType::Pointer itk::RigidImageToImageRegistrationMethod< TImage >::AffineTransformPointer

Definition at line 74 of file itkRigidImageToImageRegistrationMethod.h.

AffineTransformType

template<class TImage >

typedef AffineTransform<double, itkGetStaticConstMacro( ImageDimension )> itk::RigidImageToImageRegistrationMethod< TImage >::AffineTransformType

Definition at line 72 of file itkRigidImageToImageRegistrationMethod.h.

ConstPointer

template<class TImage >

typedef SmartPointer<const Self> itk::RigidImageToImageRegistrationMethod< TImage >::ConstPointer

Definition at line 41 of file itkRigidImageToImageRegistrationMethod.h.

Pointer

template<class TImage >

typedef SmartPointer<Self> itk::RigidImageToImageRegistrationMethod< TImage >::Pointer

Definition at line 40 of file itkRigidImageToImageRegistrationMethod.h.

Rigid2DTransformType

template<class TImage >

typedef Rigid2DTransform<double> itk::RigidImageToImageRegistrationMethod< TImage >::Rigid2DTransformType

Definition at line 67 of file itkRigidImageToImageRegistrationMethod.h.

Rigid3DTransformType

template<class TImage >

typedef VersorRigid3DTransform<double> itk::RigidImageToImageRegistrationMethod< TImage >::Rigid3DTransformType

Definition at line 68 of file itkRigidImageToImageRegistrationMethod.h.

RigidTransformType

template<class TImage >

typedef MatrixOffsetTransformBase<double, itkGetStaticConstMacro( ImageDimension ), itkGetStaticConstMacro( ImageDimension )> itk::RigidImageToImageRegistrationMethod< TImage >::RigidTransformType

Definition at line 61 of file itkRigidImageToImageRegistrationMethod.h.

Self

template<class TImage >

typedef RigidImageToImageRegistrationMethod itk::RigidImageToImageRegistrationMethod< TImage >::Self

Definition at line 38 of file itkRigidImageToImageRegistrationMethod.h.

Superclass

template<class TImage >

typedef OptimizedImageToImageRegistrationMethod<TImage> itk::RigidImageToImageRegistrationMethod< TImage >::Superclass

Definition at line 39 of file itkRigidImageToImageRegistrationMethod.h.

TransformType

template<class TImage >

typedef RigidTransformType itk::RigidImageToImageRegistrationMethod< TImage >::TransformType

Definition at line 62 of file itkRigidImageToImageRegistrationMethod.h.

Constructor & Destructor Documentation

RigidImageToImageRegistrationMethod()

template<class TImage >

itk::RigidImageToImageRegistrationMethod< TImage >::RigidImageToImageRegistrationMethod ( void  )

protected

~RigidImageToImageRegistrationMethod()

template<class TImage >

virtual itk::RigidImageToImageRegistrationMethod< TImage >::~RigidImageToImageRegistrationMethod ( void  )

protectedvirtual

Member Function Documentation

GenerateData()

template<class TImage >

void itk::RigidImageToImageRegistrationMethod< TImage >::GenerateData ( void  )

virtual

Reimplemented from itk::OptimizedImageToImageRegistrationMethod< TImage >.

GetAffineTransform()

template<class TImage >

AffineTransformPointer itk::RigidImageToImageRegistrationMethod< TImage >::GetAffineTransform

(

void

)

const

This function creates a new affine transforms that implements the current registration transform. Provided to help with transform composition. The transform is initialized with the current results available in the GetTypedTransform() method. The returned transform is not a member variable, and therefore, must be received into a SmartPointer to prevent it from being destroyed by depletion of its reference counting.

GetTypedTransform() [1/2]

template<class TImage >

TransformType* itk::RigidImageToImageRegistrationMethod< TImage >::GetTypedTransform

(

void

)

The function performs the casting. This function should only appear once in the class hierarchy. It is provided so that member functions that exist only in specific transforms (e.g., SetIdentity) can be called without the caller having to do the casting.

GetTypedTransform() [2/2]

template<class TImage >

const TransformType* itk::RigidImageToImageRegistrationMethod< TImage >::GetTypedTransform

(

void

)

const

itkNewMacro()

template<class TImage >

itk::RigidImageToImageRegistrationMethod< TImage >::itkNewMacro

(

Self

)

itkStaticConstMacro()

template<class TImage >

itk::RigidImageToImageRegistrationMethod< TImage >::itkStaticConstMacro	(	ImageDimension	,
		unsigned	int,
		TImage::ImageDimension
	)

itkTypeMacro()

template<class TImage >

itk::RigidImageToImageRegistrationMethod< TImage >::itkTypeMacro	(	RigidImageToImageRegistrationMethod< TImage >	,
		OptimizedImageToImageRegistrationMethod
	)

PrintSelf()

template<class TImage >

void itk::RigidImageToImageRegistrationMethod< TImage >::PrintSelf ( std::ostream &  os, Indent  indent  ) const

protectedvirtual

Reimplemented from itk::OptimizedImageToImageRegistrationMethod< TImage >.

SetInitialTransformParametersFromAffineTransform()

template<class TImage >

void itk::RigidImageToImageRegistrationMethod< TImage >::SetInitialTransformParametersFromAffineTransform

(

const AffineTransformType *

affine

)

Initialize the transform parameters from an AffineTransform This method is intended as an alternative to calling SetInitialTransformParameters() and SetInitialTransformFixedParameters(). These later methods require you to have a rigid transform at hand, and this is not always the case, specially when a transform initializer is being used. The method below facilitates to use the AffineTransform returned by the InitialImageToImageRegistrationMethod to directly initialize this rigid registration method. The received Affine transform will be approximated to its closest rigid transform by using Polar decomposition.

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The documentation for this class was generated from the following file:

• Modules/CLI/ExpertAutomatedRegistration/ITKRegistrationHelper/itkRigidImageToImageRegistrationMethod.h