Slicer
4.11
Slicer is a multi-platform, free and open source software package for visualization and medical image computing
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MRML node for display of a diffusion tensor. More...
#include <Libs/MRML/Core/vtkMRMLDiffusionTensorDisplayPropertiesNode.h>
Public Types | |
enum | { Trace = 0, Determinant = 1, RelativeAnisotropy = 2, FractionalAnisotropy = 3, MaxEigenvalue = 4, MidEigenvalue = 5, MinEigenvalue = 6, LinearMeasure = 7, PlanarMeasure = 8, SphericalMeasure = 9, ColorOrientation = 10, D11 = 11, D22 = 12, D33 = 13, Mode = 14, ColorMode = 15, MaxEigenvalueProjX = 16, MaxEigenvalueProjY = 17, MaxEigenvalueProjZ = 18, MaxEigenvec_ProjX = 19, MaxEigenvec_ProjY = 20, MaxEigenvec_ProjZ = 21, ParallelDiffusivity = 22, PerpendicularDiffusivity = 23, ColorOrientationMiddleEigenvector = 24, ColorOrientationMinEigenvector = 25 } |
Display Information: Types of scalars that may be generated from tensors. More... | |
enum | { Lines = 0, Tubes = 1, Ellipsoids = 2, Superquadrics = 3 } |
Display Information: Types of glyph geometry that can be displayed. More... | |
enum | { Major = 0, Middle = 1, Minor = 2 } |
Display Information: Eigenvector to display for lines/tubes glyphs. More... | |
typedef vtkMRMLColorTableNode | Superclass |
Public Types inherited from vtkMRMLColorTableNode | |
enum | { FullRainbow = 0, Grey = 1, Iron = 2, Rainbow = 3, Ocean = 4, Desert = 5, InvGrey = 6, ReverseRainbow = 7, FMRI = 8, FMRIPA = 9, Labels = 10, Obsolete = 11, Random = 12, Red = 15, Green = 16, Blue = 17, Yellow = 18, Cyan = 19, Magenta = 20, Warm1 = 21, Warm2 = 22, Warm3 = 23, Cool1 = 24, Cool2 = 25, Cool3 = 26, WarmShade1 = 27, WarmShade2 = 28, WarmShade3 = 29, CoolShade1 = 30, CoolShade2 = 31, CoolShade3 = 32, WarmTint1 = 33, WarmTint2 = 34, WarmTint3 = 35, CoolTint1 = 36, CoolTint2 = 37, CoolTint3 = 38 } |
The list of valid table types More... | |
typedef vtkMRMLColorNode | Superclass |
Public Types inherited from vtkMRMLColorNode | |
enum | { TypeModifiedEvent = 20002 } |
TypeModifiedEvent is generated when the type of the colour look up table changes. More... | |
enum | { User = 13, File = 14 } |
typedef vtkMRMLStorableNode | Superclass |
Public Types inherited from vtkMRMLStorableNode | |
typedef vtkMRMLNode | Superclass |
Public Types inherited from vtkMRMLNode | |
enum | { HierarchyModifiedEvent = 16000, IDChangedEvent = 16001, ReferenceAddedEvent, ReferenceModifiedEvent, ReferenceRemovedEvent, ReferencedNodeModifiedEvent } |
typedef vtkObject | Superclass |
Public Member Functions | |
void | ColorGlyphByFractionalAnisotropy () |
Set scalar invariant to FA (normalized variance of eigenvalues) More... | |
void | ColorGlyphByLinearMeasure () |
Set scalar invariant to FA (normalized variance of eigenvalues) More... | |
void | ColorGlyphByTrace () |
Set scalar invariant to trace (sum of eigenvalues). More... | |
void | Copy (vtkMRMLNode *node) override |
Copy the node's attributes to this object. More... | |
vtkMRMLStorageNode * | CreateDefaultStorageNode () override |
Create default storage node or nullptr if does not have one More... | |
vtkMRMLNode * | CreateNodeInstance () override |
MRMLNode methods. More... | |
virtual const char * | GetClassName () |
virtual int | GetColorGlyphBy () |
Display Information: Functions to choose the type of glyph coloring. More... | |
virtual const char * | GetColorGlyphByAsString () |
Return a text string describing the ColorGlyphBy More... | |
virtual int | GetEllipsoidGlyphPhiResolution () |
virtual int | GetEllipsoidGlyphThetaResolution () |
Display Information: Parameters of Ellipsoids glyph geometry. More... | |
int | GetFirstGlyphEigenvector () |
Return the lowest and highest integers, for use in looping More... | |
int | GetFirstGlyphGeometry () |
Return the lowest and highest integers, for use in looping More... | |
virtual vtkAlgorithmOutput * | GetGlyphConnection () |
TO DO: add the rest of the scalars. More... | |
virtual int | GetGlyphEigenvector () |
virtual const char * | GetGlyphEigenvectorAsString () |
Return a text string describing GlyphEigenvector variable More... | |
virtual const char * | GetGlyphEigenvectorAsString (int) |
virtual int | GetGlyphExtractEigenvalues () |
Whether the input tensors need eigensystem computation More... | |
virtual int | GetGlyphGeometry () |
Display Information: Functions to choose the type of glyph geometry. More... | |
virtual const char * | GetGlyphGeometryAsString () |
Return a text string describing the GlyphGeometry variable More... | |
virtual const char * | GetGlyphGeometryAsString (int) |
virtual double | GetGlyphScaleFactor () |
Display Information: Parameters of glyph geometry. More... | |
int | GetLastGlyphEigenvector () |
int | GetLastGlyphGeometry () |
virtual int | GetLineGlyphResolution () |
Display Information: Parameters of Lines glyph geometry. More... | |
const char * | GetNodeTagName () override |
Get node XML tag name (like Volume, Model) More... | |
virtual int | GetScalarInvariant () |
Display Information: Functions to choose scalar invariant. More... | |
virtual const char * | GetScalarInvariantAsString () |
TO DO: add the rest of the scalars. More... | |
virtual double | GetSuperquadricGlyphGamma () |
Display Information: Parameters of Superquadrics glyph geometry. More... | |
virtual int | GetSuperquadricGlyphPhiResolution () |
virtual int | GetSuperquadricGlyphThetaResolution () |
virtual int | GetTubeGlyphNumberOfSides () |
Number of sides of tube glyph (3 gives a triangular tube, etc.) More... | |
virtual double | GetTubeGlyphRadius () |
Display Information: Parameters of Tubes glyph geometry. More... | |
virtual void | GlyphExtractEigenvaluesOff () |
virtual void | GlyphExtractEigenvaluesOn () |
virtual int | IsA (const char *type) |
void | PrintSelf (ostream &os, vtkIndent indent) override |
void | ReadXMLAttributes (const char **atts) override |
Read node attributes from a MRML file in XML format. More... | |
virtual void | SetColorGlyphBy (int) |
virtual void | SetEllipsoidGlyphPhiResolution (int) |
virtual void | SetEllipsoidGlyphThetaResolution (int) |
void | SetGlyphEigenvector (int eigenvector) |
Set the type of glyph geometry (line, ellipsoid, etc.) More... | |
void | SetGlyphEigenvectorToMajor () |
void | SetGlyphEigenvectorToMiddle () |
void | SetGlyphEigenvectorToMinor () |
virtual void | SetGlyphExtractEigenvalues (int) |
void | SetGlyphGeometry (int geometry) |
Set the type of glyph geometry (line, ellipsoid, etc.) More... | |
void | SetGlyphGeometryToEllipsoids () |
void | SetGlyphGeometryToLines () |
void | SetGlyphGeometryToSuperquadrics () |
void | SetGlyphGeometryToTubes () |
virtual void | SetGlyphScaleFactor (double) |
Set the scale factor applied to the glyphs. More... | |
void | SetLineGlyphResolution (int resolution) |
virtual void | SetScalarInvariant (int) |
void | SetScalarInvariantToFractionalAnisotropy () |
Set scalar invariant to FA (normalized variance of eigenvalues) More... | |
void | SetScalarInvariantToLinearMeasure () |
Set scalar invariant to C_L (Westin's linear measure) More... | |
void | SetScalarInvariantToPlanarMeasure () |
Set scalar invariant to C_P (Westin's planar measure) More... | |
void | SetScalarInvariantToRelativeAnisotropy () |
Set scalar invariant to relative anisotropy. More... | |
void | SetScalarInvariantToSphericalMeasure () |
Set scalar invariant to C_S (Westin's spherical measure) More... | |
void | SetScalarInvariantToTrace () |
Set scalar invariant to trace (sum of eigenvalues). More... | |
virtual void | SetSuperquadricGlyphGamma (double) |
virtual void | SetSuperquadricGlyphPhiResolution (int) |
virtual void | SetSuperquadricGlyphThetaResolution (int) |
void | SetTubeGlyphNumberOfSides (int numberOfSides) |
void | SetTubeGlyphRadius (double radius) |
Set the radius of the tube glyph More... | |
void | WriteXML (ostream &of, int indent) override |
Write this node's information to a MRML file in XML format. More... | |
Public Member Functions inherited from vtkMRMLColorTableNode | |
void | AddColor (const char *name, double r, double g, double b, double a=1.0) |
Add a colour to the User colour table, at the end More... | |
void | ClearNames () |
clear out the names list More... | |
bool | GetColor (int entry, double color[4]) override |
int | GetFirstType () override |
Return the lowest and highest integers, for use in looping More... | |
int | GetLastType () override |
vtkLookupTable * | GetLookupTable () override |
int | GetNumberOfColors () override |
Set the size of the colour table if it's a User table More... | |
const char * | GetTypeAsString () override |
return a text string describing the colour look up table type More... | |
void | PrintSelf (ostream &os, vtkIndent indent) override |
void | ProcessMRMLEvents (vtkObject *caller, unsigned long event, void *callData) override |
Propagate events generated in mrml. More... | |
void | Reset (vtkMRMLNode *defaultNode) override |
reset when close the scene More... | |
virtual void | SetAndObserveLookupTable (vtkLookupTable *newLookupTable) |
int | SetColor (int entry, const char *name, double r, double g, double b, double a=1.0) |
Set a colour into the User colour table. Return 1 on success, 0 on failure. More... | |
int | SetColor (int entry, double r, double g, double b, double a) |
Set a colour into the User colour table. Return 1 on success, 0 on failure. More... | |
int | SetColor (int entry, double r, double g, double b) |
virtual void | SetLookupTable (vtkLookupTable *newLookupTable) |
void | SetNumberOfColors (int n) |
Set the size of the colour table if it's a User table More... | |
int | SetOpacity (int entry, double opacity) |
void | SetType (int type) override |
Get/Set for Type More... | |
void | SetTypeToBlue () |
void | SetTypeToCool1 () |
void | SetTypeToCool2 () |
void | SetTypeToCool3 () |
void | SetTypeToCoolShade1 () |
void | SetTypeToCoolShade2 () |
void | SetTypeToCoolShade3 () |
void | SetTypeToCoolTint1 () |
void | SetTypeToCoolTint2 () |
void | SetTypeToCoolTint3 () |
void | SetTypeToCyan () |
void | SetTypeToDesert () |
void | SetTypeToFMRI () |
void | SetTypeToFMRIPA () |
void | SetTypeToFullRainbow () |
void | SetTypeToGreen () |
void | SetTypeToGrey () |
void | SetTypeToInvGrey () |
void | SetTypeToIron () |
void | SetTypeToLabels () |
void | SetTypeToMagenta () |
void | SetTypeToOcean () |
void | SetTypeToRainbow () |
void | SetTypeToRandom () |
void | SetTypeToRed () |
void | SetTypeToReverseRainbow () |
void | SetTypeToWarm1 () |
void | SetTypeToWarm2 () |
void | SetTypeToWarm3 () |
void | SetTypeToWarmShade1 () |
void | SetTypeToWarmShade2 () |
void | SetTypeToWarmShade3 () |
void | SetTypeToWarmTint1 () |
void | SetTypeToWarmTint2 () |
void | SetTypeToWarmTint3 () |
void | SetTypeToYellow () |
Public Member Functions inherited from vtkMRMLColorNode | |
virtual vtkLookupTable * | CreateLookupTableCopy () |
int | GetColorIndexByName (const char *name) |
const char * | GetColorName (int ind) |
std::string | GetColorNameAsFileName (int colorIndex, const char *subst="_") |
std::string | GetColorNameWithoutSpaces (int ind, const char *subst) |
virtual char * | GetFileName () |
bool | GetModifiedSinceRead () override |
virtual int | GetNamesInitialised () |
Get/Set for the flag on names array having been initialised More... | |
virtual char * | GetNoName () |
virtual vtkScalarsToColors * | GetScalarsToColors () |
virtual int | GetType () |
Get for Type More... | |
virtual void | NamesInitialisedOff () |
virtual void | NamesInitialisedOn () |
void | PrintSelf (ostream &os, vtkIndent indent) override |
int | SetColorName (int ind, const char *name) |
int | SetColorNameWithSpaces (int ind, const char *name, const char *subst) |
virtual void | SetFileName (const char *) |
Name of the file name from which to read color information More... | |
void | SetNamesFromColors () |
Set values in the names vector from the colours in the node More... | |
virtual void | SetNamesInitialised (int) |
virtual void | SetNoName (const char *) |
void | SetTypeToFile () |
void | SetTypeToUser () |
void | UpdateScene (vtkMRMLScene *scene) override |
Public Member Functions inherited from vtkMRMLStorableNode | |
void | AddAndObserveStorageNodeID (const char *storageNodeID) |
virtual bool | AddDefaultStorageNode (const char *filename=nullptr) |
virtual vtkMRMLStorageNode * | CreateDefaultSequenceStorageNode () |
virtual std::string | GetDefaultStorageNodeClassName (const char *filename=nullptr) |
vtkMRMLStorageNode * | GetNthStorageNode (int n) |
Get associated display MRML node More... | |
const char * | GetNthStorageNodeID (int n) |
int | GetNumberOfStorageNodes () |
const char * | GetSlicerDataType () |
vtkMRMLStorageNode * | GetStorageNode () |
const char * | GetStorageNodeID () |
virtual vtkTagTable * | GetUserTagTable () |
Methods for user-specified metadata. More... | |
bool | HasStorageNodeID (const char *storageNodeID) |
Return true if storageNodeID is in the storage node ID list. More... | |
void | PrintSelf (ostream &os, vtkIndent indent) override |
void | ProcessMRMLEvents (vtkObject *, unsigned long, void *) override |
alternative method to propagate events generated in Storage nodes More... | |
void | ReadXMLAttributes (const char **atts) override |
Read node attributes from XML file More... | |
void | SetAndObserveNthStorageNodeID (int n, const char *storageNodeID) |
void | SetAndObserveStorageNodeID (const char *storageNodeID) |
String ID of the storage MRML node More... | |
void | SetSlicerDataType (const char *type) |
virtual void | StorableModified () |
void | UpdateScene (vtkMRMLScene *scene) override |
Finds the storage node and read the data More... | |
vtkMRMLCopyContentMacro (vtkMRMLStorableNode) | |
void | WriteXML (ostream &of, int indent) override |
Write this node's information to a MRML file in XML format. More... | |
Public Member Functions inherited from vtkMRMLNode | |
vtkMRMLNode * | AddAndObserveNodeReferenceID (const char *referenceRole, const char *referencedNodeID, vtkIntArray *events=nullptr) |
Add and observe a reference node from this node for a specific referenceRole. More... | |
vtkMRMLNode * | AddNodeReferenceID (const char *referenceRole, const char *referencedNodeID) |
Convenience method that adds a referencedNodeID at the end of the list. More... | |
void | AddNodeReferenceRole (const char *referenceRole, const char *mrmlAttributeName=nullptr, vtkIntArray *events=nullptr) |
Add a referenceRole. More... | |
virtual void | AddToSceneOff () |
virtual void | AddToSceneOn () |
virtual void | CopyContent (vtkMRMLNode *node, bool deepCopy=true) |
Copy node contents from another node of the same type. Does not copy node ID, Scene, Name, SingletonTag, HideFromEditors, AddToScene, UndoEnabled, and node references. If deepCopy is set to false then a shallow copy of bulk data (such as image or mesh data) could be made; copying may be faster but the node may share some data with the source node instead of creating an independent copy. More... | |
virtual void | CopyReferences (vtkMRMLNode *node) |
Copy the references of the node into this. More... | |
void | CopyWithScene (vtkMRMLNode *node) |
Copy everything (including Scene and ID) from another node of the same type. More... | |
void | DisableModifiedEventOff () |
void | DisableModifiedEventOn () |
virtual int | EndModify (int previousDisableModifiedEventState) |
End modifying the node. More... | |
virtual int | GetAddToScene () |
node added to MRML scene. More... | |
const char * | GetAttribute (const char *name) |
Get value of a name value pair attribute. More... | |
std::vector< std::string > | GetAttributeNames () |
Get all attribute names. More... | |
void | GetAttributeNames (vtkStringArray *attributeNames) |
Get all attribute names. Python-wrappable version. More... | |
virtual vtkIntArray * | GetContentModifiedEvents () |
virtual char * | GetDescription () |
virtual int | GetDisableModifiedEvent () |
Turn on/off generating InvokeEvent for set macros. More... | |
virtual int | GetHideFromEditors () |
Describes if the node is hidden. More... | |
virtual char * | GetID () |
ID use by other nodes to reference this node in XML. More... | |
virtual int | GetInMRMLCallbackFlag () |
Flags to avoid event loops. More... | |
virtual int | GetModifiedEventPending () |
virtual char * | GetName () |
vtkMRMLNode * | GetNodeReference (const char *referenceRole) |
const char * | GetNodeReferenceID (const char *referenceRole) |
Utility function that returns the first node id for a specific referenceRole. More... | |
void | GetNodeReferenceIDs (const char *referenceRole, std::vector< const char *> &referencedNodeIDs) |
Return a list of the referenced node IDs. More... | |
void | GetNodeReferenceRoles (std::vector< std::string > &roles) |
void | GetNodeReferences (const char *referenceRole, std::vector< vtkMRMLNode *> &nodes) |
Return a list of the referenced nodes. More... | |
vtkMRMLNode * | GetNthNodeReference (const char *referenceRole, int n) |
Get referenced MRML node for a specific referenceRole. More... | |
const char * | GetNthNodeReferenceID (const char *referenceRole, int n) |
Return the string of the Nth node ID for a specific reference role. More... | |
const char * | GetNthNodeReferenceRole (int n) |
int | GetNumberOfNodeReferenceRoles () |
int | GetNumberOfNodeReferences (const char *referenceRole) |
Return the number of node IDs for a specific reference role (and nodes as they always have the same size). More... | |
virtual int | GetSaveWithScene () |
Save node with MRML scene. More... | |
virtual vtkMRMLScene * | GetScene () |
Get the scene this node has been added to. More... | |
virtual int | GetSelectable () |
Describes if the node is selectable. More... | |
virtual int | GetSelected () |
Get/Set for Selected. More... | |
virtual char * | GetSingletonTag () |
virtual bool | GetUndoEnabled () |
virtual bool | HasCopyContent () const |
Returns true if the class supports deep and shallow copying node content. More... | |
bool | HasNodeReferenceID (const char *referenceRole, const char *referencedNodeID) |
Return true if referencedNodeID is in the node ID list for a specific referenceRole. More... | |
virtual void | HideFromEditorsOff () |
virtual void | HideFromEditorsOn () |
virtual void | InvokeCustomModifiedEvent (int eventId, void *callData=nullptr) |
This method allows the node to compress events. More... | |
virtual int | InvokePendingModifiedEvent () |
Invokes any modified events that are pending . More... | |
bool | IsSingleton () |
void | Modified () override |
Customized version of Modified() allowing to compress vtkCommand::ModifiedEvent. More... | |
virtual void | OnNodeAddedToScene () |
void | PrintSelf (ostream &os, vtkIndent indent) override |
virtual void | ProcessChildNode (vtkMRMLNode *) |
Set dependencies between this node and a child node when parsing XML file. More... | |
void | RemoveAttribute (const char *name) |
Remove attribute with the specified name. More... | |
void | RemoveNodeReferenceIDs (const char *referenceRole) |
Remove all node IDs and associated nodes for a specific referenceRole. More... | |
void | RemoveNthNodeReferenceID (const char *referenceRole, int n) |
Convenience method that removes the Nth node ID from the list. More... | |
virtual void | SaveWithSceneOff () |
virtual void | SaveWithSceneOn () |
virtual void | SelectableOff () |
virtual void | SelectableOn () |
virtual void | SelectedOff () |
virtual void | SelectedOn () |
virtual void | SetAddToScene (int) |
void | SetAddToSceneNoModify (int value) |
vtkMRMLNode * | SetAndObserveNodeReferenceID (const char *referenceRole, const char *referencedNodeID, vtkIntArray *events=nullptr) |
Set and observe a reference node from this node for a specific referenceRole. More... | |
vtkMRMLNode * | SetAndObserveNthNodeReferenceID (const char *referenceRole, int n, const char *referencedNodeID, vtkIntArray *events=nullptr) |
Set and observe the Nth node ID for a specific reference role. More... | |
void | SetAttribute (const char *name, const char *value) |
Set a name value pair attribute. More... | |
virtual void | SetDescription (const char *) |
Text description of this node, to be set by the user. More... | |
void | SetDisableModifiedEvent (int onOff) |
virtual void | SetHideFromEditors (int) |
void | SetInMRMLCallbackFlag (int flag) |
virtual void | SetName (const char *) |
Name of this node, to be set by the user. More... | |
vtkMRMLNode * | SetNodeReferenceID (const char *referenceRole, const char *referencedNodeID) |
Set a reference to a node with specified nodeID from this node for a specific referenceRole. More... | |
vtkMRMLNode * | SetNthNodeReferenceID (const char *referenceRole, int n, const char *referencedNodeID) |
Set a N-th reference from this node with specified referencedNodeID for a specific referenceRole. More... | |
virtual void | SetSaveWithScene (int) |
virtual void | SetScene (vtkMRMLScene *scene) |
This method is for internal use only. Use AddNode method of vtkMRMLScene to add a node to the scene. More... | |
virtual void | SetSceneReferences () |
Update the references of the node to the scene. More... | |
virtual void | SetSelectable (int) |
virtual void | SetSelected (int) |
void | SetSingletonOff () |
void | SetSingletonOn () |
virtual void | SetSingletonTag (const char *) |
Tag that make this node a singleton in the scene. More... | |
virtual void | SetUndoEnabled (bool) |
virtual int | StartModify () |
Start modifying the node. Disable Modify events. More... | |
virtual void | UndoEnabledOff () |
virtual void | UndoEnabledOn () |
virtual void | UpdateReferenceID (const char *oldID, const char *newID) |
Update the stored reference to another node in the scene. More... | |
virtual void | UpdateReferences () |
The method should remove all pointers and observations to all nodes that are not in the scene anymore. More... | |
const char * | URLDecodeString (const char *inString) |
Decode a URL string. More... | |
const char * | URLEncodeString (const char *inString) |
Encode a URL string. More... | |
virtual void | WriteNodeBodyXML (ostream &of, int indent) |
Write this node's body to a MRML file in XML format. More... | |
std::string | XMLAttributeDecodeString (const std::string &inString) |
Decode an XML attribute string. More... | |
std::string | XMLAttributeEncodeString (const std::string &inString) |
Encode an XML attribute string (replaces special characters by code sequences) More... | |
Static Public Member Functions | |
static int | GetFirstColorGlyphBy () |
Return the lowest and highest integers, for use in looping More... | |
static int | GetFirstScalarInvariant () |
Return the lowest and highest integers, for use in looping. More... | |
static int | GetLastColorGlyphBy () |
static int | GetLastScalarInvariant () |
static const char * | GetScalarEnumAsString (int val) |
static int | IsTypeOf (const char *type) |
static vtkMRMLDiffusionTensorDisplayPropertiesNode * | New () |
static vtkMRMLDiffusionTensorDisplayPropertiesNode * | SafeDownCast (vtkObject *o) |
static bool | ScalarInvariantHasKnownScalarRange (int ScalarInvariant) |
static void | ScalarInvariantKnownScalarRange (int ScalarInvariant, double range[2]) |
Static Public Member Functions inherited from vtkMRMLColorTableNode | |
static int | IsTypeOf (const char *type) |
static vtkMRMLColorTableNode * | New () |
static vtkMRMLColorTableNode * | SafeDownCast (vtkObject *o) |
Static Public Member Functions inherited from vtkMRMLColorNode | |
static int | IsTypeOf (const char *type) |
static vtkMRMLColorNode * | New () |
static vtkMRMLColorNode * | SafeDownCast (vtkObject *o) |
Static Public Member Functions inherited from vtkMRMLStorableNode | |
static int | IsTypeOf (const char *type) |
static vtkMRMLStorableNode * | SafeDownCast (vtkObject *o) |
Static Public Member Functions inherited from vtkMRMLNode | |
static int | IsTypeOf (const char *type) |
static vtkMRMLNode * | SafeDownCast (vtkObject *o) |
Protected Member Functions | |
void | operator= (const vtkMRMLDiffusionTensorDisplayPropertiesNode &) |
virtual void | SetGlyphConnection (vtkAlgorithmOutput *glyphPort) |
-— End of parameters that should be written to MRML — // More... | |
void | UpdateGlyphSource () |
vtkMRMLDiffusionTensorDisplayPropertiesNode () | |
vtkMRMLDiffusionTensorDisplayPropertiesNode (const vtkMRMLDiffusionTensorDisplayPropertiesNode &) | |
~vtkMRMLDiffusionTensorDisplayPropertiesNode () override | |
Protected Member Functions inherited from vtkMRMLColorTableNode | |
void | operator= (const vtkMRMLColorTableNode &) |
vtkMRMLColorTableNode () | |
vtkMRMLColorTableNode (const vtkMRMLColorTableNode &) | |
~vtkMRMLColorTableNode () override | |
Protected Member Functions inherited from vtkMRMLColorNode | |
virtual bool | HasNameFromColor (int index) |
void | operator= (const vtkMRMLColorNode &) |
virtual bool | SetNameFromColor (int index) |
Set values in the names vector from the colours in the node More... | |
vtkMRMLColorNode () | |
vtkMRMLColorNode (const vtkMRMLColorNode &) | |
~vtkMRMLColorNode () override | |
Protected Member Functions inherited from vtkMRMLStorableNode | |
virtual const char * | GetStorageNodeReferenceMRMLAttributeName () |
virtual const char * | GetStorageNodeReferenceRole () |
virtual vtkTimeStamp | GetStoredTime () |
void | operator= (const vtkMRMLStorableNode &) |
vtkMRMLStorableNode () | |
vtkMRMLStorableNode (const vtkMRMLStorableNode &) | |
~vtkMRMLStorableNode () override | |
Protected Member Functions inherited from vtkMRMLNode | |
virtual const char * | GetMRMLAttributeNameFromReferenceRole (const char *refRole) |
Return the mrml attribute name (if found) associated with a reference role. Return 0 otherwise. More... | |
virtual const char * | GetReferenceRoleFromMRMLAttributeName (const char *attName) |
Return the reference role (if found) associated with the attribute name found in a MRML scene file. Return 0 otherwise. More... | |
virtual char * | GetTempURLString () |
void | GetUpdatedReferencedNodeEventList (int &oldReferencedNodeUseCount, int &newReferencedNodeUseCount, vtkIntArray *oldConsolidatedEventList, vtkIntArray *newConsolidatedEventList, vtkMRMLNode *oldReferencedNode, vtkMRMLNode *newReferencedNode, vtkMRMLNodeReference *referenceToIgnore, vtkIntArray *newEvents) |
virtual void | InvalidateNodeReferences () |
virtual bool | IsReferenceRoleGeneric (const char *refRole) |
Return true if the reference role is generic (ends with '/') or false otherwise. More... | |
virtual void | OnNodeReferenceAdded (vtkMRMLNodeReference *reference) |
virtual void | OnNodeReferenceModified (vtkMRMLNodeReference *reference) |
Called when a referenced node pointer is modified. More... | |
virtual void | OnNodeReferenceRemoved (vtkMRMLNodeReference *reference) |
Called when a referenced node pointer is removed (set to nullptr). More... | |
void | operator= (const vtkMRMLNode &) |
void | ParseReferencesAttribute (const char *attValue, std::set< std::string > &references) |
virtual void | SetTempURLString (const char *) |
Get/Set the string used to manage encoding/decoding of strings/URLs with special characters. More... | |
vtkMRMLNode * | UpdateNodeReferenceEventObserver (vtkMRMLNode *oldReferencedNode, vtkMRMLNode *newReferencedNode, vtkIntArray *newEvents, vtkMRMLNodeReference *referenceToIgnore) |
virtual void | UpdateNodeReferences (const char *referenceRole=nullptr) |
virtual void | UpdateNthNodeReference (const char *referenceRole, int n) |
vtkMRMLNode () | |
vtkMRMLNode (const vtkMRMLNode &) | |
~vtkMRMLNode () override | |
critical to have a virtual destructor! More... | |
Protected Attributes | |
int | ColorGlyphBy |
int | EllipsoidGlyphPhiResolution |
int | EllipsoidGlyphThetaResolution |
Ellipsoid Glyph parameters. More... | |
vtkAlgorithmOutput * | GlyphConnection |
int | GlyphEigenvector |
int | GlyphExtractEigenvalues |
int | GlyphGeometry |
Glyph general parameters. More... | |
double | GlyphScaleFactor |
int | LineGlyphResolution |
Line Glyph parameters. More... | |
int | ScalarInvariant |
-— Parameters that should be written to MRML — // More... | |
double | SuperquadricGlyphGamma |
Superquadric Glyph parameters. More... | |
int | SuperquadricGlyphPhiResolution |
int | SuperquadricGlyphThetaResolution |
int | TubeGlyphNumberOfSides |
double | TubeGlyphRadius |
Tube Glyph parameters. More... | |
Protected Attributes inherited from vtkMRMLColorTableNode | |
vtkLookupTable * | LookupTable |
The look up table, constructed according to the Type More... | |
Protected Attributes inherited from vtkMRMLColorNode | |
char * | FileName |
A file name to read text attributes from More... | |
std::vector< std::string > | Names |
A vector of names for the color table elements More... | |
int | NamesInitialised |
Have the colour names been set? Used to do lazy copy of the Names array. More... | |
char * | NoName |
the string used for an unnamed colour More... | |
int | Type |
Protected Attributes inherited from vtkMRMLStorableNode | |
std::string | SlicerDataType |
vtkTimeStamp | StorableModifiedTime |
vtkTagTable * | UserTagTable |
Protected Attributes inherited from vtkMRMLNode | |
int | AddToScene {1} |
AttributesType | Attributes |
vtkIntArray * | ContentModifiedEvents |
char * | Description {nullptr} |
int | HideFromEditors {0} |
char * | ID {nullptr} |
int | InMRMLCallbackFlag {0} |
Flag to avoid event loops More... | |
vtkCallbackCommand * | MRMLCallbackCommand |
Holders for MRML callbacks. More... | |
vtkObserverManager * | MRMLObserverManager |
char * | Name {nullptr} |
NodeReferenceEventsType | NodeReferenceEvents |
std::map< std::string, std::string > | NodeReferenceMRMLAttributeNames |
NodeReferencesType | NodeReferences |
int | SaveWithScene {true} |
vtkWeakPointer< vtkMRMLScene > | Scene |
int | Selectable {1} |
int | Selected {0} |
bool | UndoEnabled {false} |
Additional Inherited Members | |
Public Attributes inherited from vtkMRMLColorTableNode | |
int | LastAddedColor |
keep track of where we last added a colour More... | |
Protected Types inherited from vtkMRMLNode | |
typedef std::map< std::string, std::string > | AttributesType |
typedef std::map< std::string, vtkSmartPointer< vtkIntArray > > | NodeReferenceEventsType |
typedef std::vector< vtkSmartPointer< vtkMRMLNodeReference > > | NodeReferenceListType |
typedef std::map< std::string, NodeReferenceListType > | NodeReferencesType |
Static Protected Member Functions inherited from vtkMRMLNode | |
static void | MRMLCallback (vtkObject *caller, unsigned long eid, void *clientData, void *callData) |
Static Protected Attributes inherited from vtkMRMLStorableNode | |
static const char * | StorageNodeReferenceMRMLAttributeName |
static const char * | StorageNodeReferenceRole |
MRML node for display of a diffusion tensor.
This node describes display properties at the (conceptual) single-tensor level. A tensor can be displayed using various scalar invariants and glyphs. This class is used by classes (vtkMRMLFiberBundleDisplayNode, vtkMRMLDiffusionTensorVolumeDisplayNode) that handle higher-level display concepts for many diffusion tensors, such as choosing between scalars/glyphs/etc. for specific display needs. This class inherits from the vtkMRMLColorNode->vtkMRMLColorTableNode superclasses, used for vtkMRMLModelNodes and vtkMRMLVolumeNodes, in order to provide specific lookup tables for the scalar invariant display.
Definition at line 35 of file vtkMRMLDiffusionTensorDisplayPropertiesNode.h.
Definition at line 39 of file vtkMRMLDiffusionTensorDisplayPropertiesNode.h.
anonymous enum |
Display Information: Types of scalars that may be generated from tensors.
Definition at line 68 of file vtkMRMLDiffusionTensorDisplayPropertiesNode.h.
anonymous enum |
Display Information: Types of glyph geometry that can be displayed.
Enumerator | |
---|---|
Lines | |
Tubes | |
Ellipsoids | |
Superquadrics |
Definition at line 161 of file vtkMRMLDiffusionTensorDisplayPropertiesNode.h.
anonymous enum |
Display Information: Eigenvector to display for lines/tubes glyphs.
Enumerator | |
---|---|
Major | |
Middle | |
Minor |
Definition at line 235 of file vtkMRMLDiffusionTensorDisplayPropertiesNode.h.
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Set scalar invariant to FA (normalized variance of eigenvalues)
Definition at line 422 of file vtkMRMLDiffusionTensorDisplayPropertiesNode.h.
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inline |
Set scalar invariant to FA (normalized variance of eigenvalues)
Definition at line 428 of file vtkMRMLDiffusionTensorDisplayPropertiesNode.h.
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Set scalar invariant to trace (sum of eigenvalues).
Definition at line 416 of file vtkMRMLDiffusionTensorDisplayPropertiesNode.h.
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overridevirtual |
Copy the node's attributes to this object.
Reimplemented from vtkMRMLColorTableNode.
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Create default storage node or nullptr if does not have one
Reimplemented from vtkMRMLColorTableNode.
Definition at line 451 of file vtkMRMLDiffusionTensorDisplayPropertiesNode.h.
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MRMLNode methods.
Reimplemented from vtkMRMLColorTableNode.
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Reimplemented from vtkMRMLColorTableNode.
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Display Information: Functions to choose the type of glyph coloring.
Get type of scalar invariant (tensor-derived scalar, invariant to tensor rotation) selected for display.
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Return a text string describing the ColorGlyphBy
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Number of polygons used in latitude direction for sphere that will be scaled by tensor to form ellipsoid.
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Display Information: Parameters of Ellipsoids glyph geometry.
Number of polygons used in longitude direction for sphere that will be scaled by tensor to form ellipsoid.
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Return the lowest and highest integers, for use in looping
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Return the lowest and highest integers, for use in looping
Definition at line 287 of file vtkMRMLDiffusionTensorDisplayPropertiesNode.h.
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Return the lowest and highest integers, for use in looping
Definition at line 205 of file vtkMRMLDiffusionTensorDisplayPropertiesNode.h.
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Return the lowest and highest integers, for use in looping.
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TO DO: add the rest of the scalars.
Convenience functions to get an appropriate glyph source Get a polydata object according to current glyph display settings (so a line, sphere, or tube) to use as a source for a glyphing filter.
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Description Which eigenvector to display with lines or tubes glyphs
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Return a text string describing GlyphEigenvector variable
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Whether the input tensors need eigensystem computation
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Display Information: Functions to choose the type of glyph geometry.
Get the type of glyph geometry (line, ellipsoid, etc.)
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Return a text string describing the GlyphGeometry variable
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Display Information: Parameters of glyph geometry.
Get the scale factor applied to the glyphs.
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inline |
Definition at line 288 of file vtkMRMLDiffusionTensorDisplayPropertiesNode.h.
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Definition at line 206 of file vtkMRMLDiffusionTensorDisplayPropertiesNode.h.
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Display Information: Parameters of Lines glyph geometry.
Resolution of lines displayed as tensor glyphs
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Get node XML tag name (like Volume, Model)
Reimplemented from vtkMRMLColorTableNode.
Definition at line 62 of file vtkMRMLDiffusionTensorDisplayPropertiesNode.h.
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Display Information: Functions to choose scalar invariant.
Get type of scalar invariant (tensor-derived scalar, invariant to tensor rotation) selected for display.
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TO DO: add the rest of the scalars.
Return a text string describing the ScalarInvariant variable
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Display Information: Parameters of Superquadrics glyph geometry.
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Number of sides of tube glyph (3 gives a triangular tube, etc.)
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Display Information: Parameters of Tubes glyph geometry.
Get the radius of the tube glyph
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Reimplemented from vtkMRMLColorTableNode.
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static |
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override |
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Read node attributes from a MRML file in XML format.
Reimplemented from vtkMRMLColorTableNode.
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static |
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static |
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virtual |
Get type of scalar invariant (tensor-derived scalar, invariant to tensor rotation) selected for display.
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-— End of parameters that should be written to MRML — //
This is used internally to set a pointer to this polydata and reference count it. TO DO: is this causing an extra modified event?
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Set the type of glyph geometry (line, ellipsoid, etc.)
Description Which eigenvector to display with lines or tubes glyphsAlso update the glyph polydata source
Update the source if the eigenvector has changed
Definition at line 253 of file vtkMRMLDiffusionTensorDisplayPropertiesNode.h.
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Description Display major eigenvector with lines or tubes glyphs
Definition at line 269 of file vtkMRMLDiffusionTensorDisplayPropertiesNode.h.
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Description Display "middle" (second) eigenvector with lines or tubes glyphs
Definition at line 275 of file vtkMRMLDiffusionTensorDisplayPropertiesNode.h.
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Description Display minor eigenvector with lines or tubes glyphs
Definition at line 281 of file vtkMRMLDiffusionTensorDisplayPropertiesNode.h.
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virtual |
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inline |
Set the type of glyph geometry (line, ellipsoid, etc.)
Also update the glyph polydata source
Definition at line 181 of file vtkMRMLDiffusionTensorDisplayPropertiesNode.h.
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inline |
Definition at line 196 of file vtkMRMLDiffusionTensorDisplayPropertiesNode.h.
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inline |
Definition at line 190 of file vtkMRMLDiffusionTensorDisplayPropertiesNode.h.
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inline |
Definition at line 199 of file vtkMRMLDiffusionTensorDisplayPropertiesNode.h.
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Definition at line 193 of file vtkMRMLDiffusionTensorDisplayPropertiesNode.h.
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Set the scale factor applied to the glyphs.
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Update the source if the resolution has changed
Definition at line 303 of file vtkMRMLDiffusionTensorDisplayPropertiesNode.h.
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Get type of scalar invariant (tensor-derived scalar, invariant to tensor rotation) selected for display.
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inline |
Set scalar invariant to FA (normalized variance of eigenvalues)
Definition at line 129 of file vtkMRMLDiffusionTensorDisplayPropertiesNode.h.
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Set scalar invariant to C_L (Westin's linear measure)
Definition at line 135 of file vtkMRMLDiffusionTensorDisplayPropertiesNode.h.
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Set scalar invariant to C_P (Westin's planar measure)
Definition at line 141 of file vtkMRMLDiffusionTensorDisplayPropertiesNode.h.
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Set scalar invariant to relative anisotropy.
Definition at line 123 of file vtkMRMLDiffusionTensorDisplayPropertiesNode.h.
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Set scalar invariant to C_S (Westin's spherical measure)
Definition at line 147 of file vtkMRMLDiffusionTensorDisplayPropertiesNode.h.
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Set scalar invariant to trace (sum of eigenvalues).
Definition at line 117 of file vtkMRMLDiffusionTensorDisplayPropertiesNode.h.
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Update the source if the numberOfSides has changed
Definition at line 346 of file vtkMRMLDiffusionTensorDisplayPropertiesNode.h.
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Set the radius of the tube glyph
Update the source if the radius has changed
Definition at line 328 of file vtkMRMLDiffusionTensorDisplayPropertiesNode.h.
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Write this node's information to a MRML file in XML format.
Reimplemented from vtkMRMLColorTableNode.
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Definition at line 470 of file vtkMRMLDiffusionTensorDisplayPropertiesNode.h.
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Definition at line 484 of file vtkMRMLDiffusionTensorDisplayPropertiesNode.h.
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Ellipsoid Glyph parameters.
Definition at line 483 of file vtkMRMLDiffusionTensorDisplayPropertiesNode.h.
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Definition at line 497 of file vtkMRMLDiffusionTensorDisplayPropertiesNode.h.
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Definition at line 472 of file vtkMRMLDiffusionTensorDisplayPropertiesNode.h.
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Definition at line 473 of file vtkMRMLDiffusionTensorDisplayPropertiesNode.h.
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Glyph general parameters.
Definition at line 469 of file vtkMRMLDiffusionTensorDisplayPropertiesNode.h.
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Definition at line 471 of file vtkMRMLDiffusionTensorDisplayPropertiesNode.h.
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Line Glyph parameters.
Definition at line 476 of file vtkMRMLDiffusionTensorDisplayPropertiesNode.h.
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-— Parameters that should be written to MRML — //
Scalar display parameters
Definition at line 466 of file vtkMRMLDiffusionTensorDisplayPropertiesNode.h.
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Superquadric Glyph parameters.
Definition at line 487 of file vtkMRMLDiffusionTensorDisplayPropertiesNode.h.
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Definition at line 489 of file vtkMRMLDiffusionTensorDisplayPropertiesNode.h.
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Definition at line 488 of file vtkMRMLDiffusionTensorDisplayPropertiesNode.h.
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Definition at line 480 of file vtkMRMLDiffusionTensorDisplayPropertiesNode.h.
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Tube Glyph parameters.
Definition at line 479 of file vtkMRMLDiffusionTensorDisplayPropertiesNode.h.