vtkITKTimeSeriesDatabase Class Reference

Efficiently process large datasets in small memory. More...

#include <Libs/vtkITK/vtkITKTimeSeriesDatabase.h>

Inheritance diagram for vtkITKTimeSeriesDatabase:

Collaboration diagram for vtkITKTimeSeriesDatabase:

Public Types
typedef vtkImageAlgorithm	Superclass

Public Member Functions
virtual const char *	GetClassName ()
unsigned int	GetCurrentImage (unsigned int vtkNotUsed(value))
int	GetNumberOfVolumes ()
virtual int	IsA (const char *type)
void	PrintSelf (ostream &os, vtkIndent indent) override
void	SetCurrentImage (unsigned int value)
	Get/Set the current time stamp to read. More...

Static Public Member Functions
static void	CreateFromFileArchetype (const char *TSDFilename, const char *ArchetypeFilename)
	Create a TimeSeriesDatabase from a series of volumes. More...
static int	IsTypeOf (const char *type)
static vtkITKTimeSeriesDatabase *	New ()
	vtkStandardNewMacro ( vtkITKTimeSeriesDatabase ); More...
static vtkITKTimeSeriesDatabase *	SafeDownCast (vtkObject *o)

Protected Types
typedef itk::VTKImageExport< OutputImageType >	ImageExportType
typedef SourceType	ImageFilterType
typedef short	InputImagePixelType
typedef short	OutputImagePixelType
typedef itk::Image< OutputImagePixelType, 3 >	OutputImageType
typedef itk::TimeSeriesDatabase< OutputImagePixelType >	SourceType

Protected Member Functions
void	ExecuteDataWithInformation (vtkDataObject *output, vtkInformation *outInfo) override
	defined in the subclasses More...
int	RequestInformation (vtkInformation *, vtkInformationVector **, vtkInformationVector *) override
	vtkITKTimeSeriesDatabase ()
	~vtkITKTimeSeriesDatabase () override

Protected Attributes
ImageExportType::Pointer	itkExporter
SourceType::Pointer	m_Filter
vtkImageImport *	vtkImporter

Detailed Description

Efficiently process large datasets in small memory.

TimeSeriesDatabase creates a database on disk from a series of volumes stored on disk. The database allows efficient access to volumes, slices and voxels through time.

Note

This work is part of the National Alliance for Medical Image Computing (NAMIC), funded by the National Institutes of Health through the NIH Roadmap for Medical Research, Grant U54 EB005149.

Definition at line 36 of file vtkITKTimeSeriesDatabase.h.

Member Typedef Documentation

ImageExportType

typedef itk::VTKImageExport<OutputImageType> vtkITKTimeSeriesDatabase::ImageExportType

protected

Definition at line 80 of file vtkITKTimeSeriesDatabase.h.

ImageFilterType

typedef SourceType vtkITKTimeSeriesDatabase::ImageFilterType

protected

Definition at line 82 of file vtkITKTimeSeriesDatabase.h.

InputImagePixelType

typedef short vtkITKTimeSeriesDatabase::InputImagePixelType

protected

Definition at line 77 of file vtkITKTimeSeriesDatabase.h.

OutputImagePixelType

typedef short vtkITKTimeSeriesDatabase::OutputImagePixelType

protected

Definition at line 78 of file vtkITKTimeSeriesDatabase.h.

OutputImageType

typedef itk::Image<OutputImagePixelType, 3> vtkITKTimeSeriesDatabase::OutputImageType

protected

Definition at line 79 of file vtkITKTimeSeriesDatabase.h.

SourceType

typedef itk::TimeSeriesDatabase<OutputImagePixelType> vtkITKTimeSeriesDatabase::SourceType

protected

Definition at line 81 of file vtkITKTimeSeriesDatabase.h.

Superclass

typedef vtkImageAlgorithm vtkITKTimeSeriesDatabase::Superclass

Definition at line 42 of file vtkITKTimeSeriesDatabase.h.

Constructor & Destructor Documentation

vtkITKTimeSeriesDatabase()

vtkITKTimeSeriesDatabase::vtkITKTimeSeriesDatabase ( )

inlineprotected

Definition at line 65 of file vtkITKTimeSeriesDatabase.h.

~vtkITKTimeSeriesDatabase()

vtkITKTimeSeriesDatabase::~vtkITKTimeSeriesDatabase ( )

inlineoverrideprotected

Definition at line 73 of file vtkITKTimeSeriesDatabase.h.

Member Function Documentation

CreateFromFileArchetype()

static void vtkITKTimeSeriesDatabase::CreateFromFileArchetype ( const char *  TSDFilename, const char *  ArchetypeFilename  )

inlinestatic

Create a TimeSeriesDatabase from a series of volumes.

Definition at line 46 of file vtkITKTimeSeriesDatabase.h.

ExecuteDataWithInformation()

void vtkITKTimeSeriesDatabase::ExecuteDataWithInformation ( vtkDataObject *  output, vtkInformation *  outInfo  )

overrideprotected

defined in the subclasses

GetClassName()

virtual const char* vtkITKTimeSeriesDatabase::GetClassName ( )

virtual

GetCurrentImage()

unsigned int vtkITKTimeSeriesDatabase::GetCurrentImage ( unsigned int   vtkNotUsedvalue )

inline

Definition at line 58 of file vtkITKTimeSeriesDatabase.h.

GetNumberOfVolumes()

int vtkITKTimeSeriesDatabase::GetNumberOfVolumes ( )

inline

Definition at line 61 of file vtkITKTimeSeriesDatabase.h.

IsA()

virtual int vtkITKTimeSeriesDatabase::IsA ( const char *  type )

virtual

IsTypeOf()

static int vtkITKTimeSeriesDatabase::IsTypeOf ( const char *  type )

static

New()

static vtkITKTimeSeriesDatabase* vtkITKTimeSeriesDatabase::New ( )

static

vtkStandardNewMacro ( vtkITKTimeSeriesDatabase );

PrintSelf()

void vtkITKTimeSeriesDatabase::PrintSelf ( ostream &  os, vtkIndent  indent  )

inlineoverride

Definition at line 41 of file vtkITKTimeSeriesDatabase.h.

RequestInformation()

int vtkITKTimeSeriesDatabase::RequestInformation ( vtkInformation *  , vtkInformationVector **  , vtkInformationVector *    )

overrideprotected

SafeDownCast()

static vtkITKTimeSeriesDatabase* vtkITKTimeSeriesDatabase::SafeDownCast ( vtkObject *  o )

static

SetCurrentImage()

void vtkITKTimeSeriesDatabase::SetCurrentImage ( unsigned int  value )

inline

Get/Set the current time stamp to read.

Connect/Disconnect to a database void Connect ( const char* filename ) { this->m_Filter->Connect ( filename ); this->Modified(); }; void Disconnect() { this->m_Filter->Disconnect(); }

Definition at line 56 of file vtkITKTimeSeriesDatabase.h.

Member Data Documentation

itkExporter

ImageExportType::Pointer vtkITKTimeSeriesDatabase::itkExporter

protected

Definition at line 85 of file vtkITKTimeSeriesDatabase.h.

m_Filter

SourceType::Pointer vtkITKTimeSeriesDatabase::m_Filter

protected

Definition at line 84 of file vtkITKTimeSeriesDatabase.h.

vtkImporter

vtkImageImport* vtkITKTimeSeriesDatabase::vtkImporter

protected

Definition at line 86 of file vtkITKTimeSeriesDatabase.h.

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The documentation for this class was generated from the following file:

• Libs/vtkITK/vtkITKTimeSeriesDatabase.h