itk::AffineImageToImageRegistrationMethod< TImage > Class Template Reference

#include <Modules/CLI/ExpertAutomatedRegistration/ITKRegistrationHelper/itkAffineImageToImageRegistrationMethod.h>

Inheritance diagram for itk::AffineImageToImageRegistrationMethod< TImage >:

Collaboration diagram for itk::AffineImageToImageRegistrationMethod< TImage >:

Public Types
typedef AffineTransformType::Pointer	AffineTransformPointer
typedef AffineTransform< double, itkGetStaticConstMacro(ImageDimension)>	AffineTransformType
typedef SmartPointer< const Self >	ConstPointer
typedef SmartPointer< Self >	Pointer
typedef AffineImageToImageRegistrationMethod	Self
typedef OptimizedImageToImageRegistrationMethod< TImage >	Superclass
typedef AffineTransformType	TransformType
Public Types inherited from itk::OptimizedImageToImageRegistrationMethod< TImage >
typedef SmartPointer< const Self >	ConstPointer
typedef TImage	ImageType
enum	InterpolationMethodEnumType { NEAREST_NEIGHBOR_INTERPOLATION, LINEAR_INTERPOLATION, BSPLINE_INTERPOLATION, SINC_INTERPOLATION }
enum	MetricMethodEnumType { MATTES_MI_METRIC, NORMALIZED_CORRELATION_METRIC, MEAN_SQUARED_ERROR_METRIC }
typedef ImageType::PixelType	PixelType
typedef SmartPointer< Self >	Pointer
typedef OptimizedImageToImageRegistrationMethod	Self
typedef ImageToImageRegistrationMethod< TImage >	Superclass
enum	TransformMethodEnumType { RIGID_TRANSFORM, AFFINE_TRANSFORM, BSPLINE_TRANSFORM }
typedef TransformType::ParametersType	TransformParametersScalesType
typedef TransformType::ParametersType	TransformParametersType
typedef Superclass::TransformType	TransformType
Public Types inherited from itk::ImageToImageRegistrationMethod< TImage >
typedef SmartPointer< const Self >	ConstPointer
typedef DataObject::Pointer	DataObjectPointer
typedef Superclass::DataObjectPointerArraySizeType	DataObjectPointerArraySizeType
typedef TImage	ImageType
typedef SpatialObject< itkGetStaticConstMacro(ImageDimension)>	MaskObjectType
typedef SmartPointer< Self >	Pointer
typedef TImage::PointType	PointType
typedef ImageToImageRegistrationMethod	Self
typedef ProcessObject	Superclass
typedef DataObjectDecorator< TransformType >	TransformOutputType
typedef Transform< double, itkGetStaticConstMacro(ImageDimension), itkGetStaticConstMacro(ImageDimension)>	TransformType

Public Member Functions
void	GenerateData (void) ITK_OVERRIDE
AffineTransformPointer	GetAffineTransform (void) const
TransformType *	GetTypedTransform (void)
const TransformType *	GetTypedTransform (void) const
	itkNewMacro (Self)
	itkStaticConstMacro (ImageDimension, unsigned int, TImage::ImageDimension)
	itkTypeMacro (AffineImageToImageRegistrationMethod, OptimizedImageToImageRegistrationMethod)
void	SetInitialTransformParametersFromAffineTransform (const AffineTransformType *affine)
Public Member Functions inherited from itk::OptimizedImageToImageRegistrationMethod< TImage >
	itkGetConstMacro (InitialTransformParameters, TransformParametersType)
	itkGetConstMacro (InitialTransformFixedParameters, TransformParametersType)
	itkGetConstMacro (LastTransformParameters, TransformParametersType)
	itkGetConstMacro (TransformParametersScales, TransformParametersScalesType)
	itkGetConstMacro (SampleFromOverlap, bool)
	itkGetConstMacro (MinimizeMemory, bool)
	itkGetConstMacro (MaxIterations, unsigned int)
	itkGetConstMacro (UseEvolutionaryOptimization, bool)
	itkGetConstMacro (NumberOfSamples, unsigned int)
	itkGetConstMacro (UseFixedImageSamplesIntensityThreshold, bool)
	itkGetConstMacro (FixedImageSamplesIntensityThreshold, PixelType)
	itkGetConstMacro (TargetError, double)
	itkGetConstMacro (RandomNumberSeed, int)
	itkGetConstMacro (TransformMethodEnum, TransformMethodEnumType)
	itkGetConstMacro (MetricMethodEnum, MetricMethodEnumType)
	itkGetConstMacro (InterpolationMethodEnum, InterpolationMethodEnumType)
	itkGetMacro (FinalMetricValue, double)
	itkNewMacro (Self)
	itkSetMacro (InitialTransformParameters, TransformParametersType)
	itkSetMacro (InitialTransformFixedParameters, TransformParametersType)
	itkSetMacro (LastTransformParameters, TransformParametersType)
	itkSetMacro (TransformParametersScales, TransformParametersScalesType)
	itkSetMacro (SampleFromOverlap, bool)
	itkSetMacro (MinimizeMemory, bool)
	itkSetMacro (MaxIterations, unsigned int)
	itkSetMacro (UseEvolutionaryOptimization, bool)
	itkSetMacro (NumberOfSamples, unsigned int)
	itkSetMacro (UseFixedImageSamplesIntensityThreshold, bool)
	itkSetMacro (TargetError, double)
	itkSetMacro (RandomNumberSeed, int)
	itkSetMacro (MetricMethodEnum, MetricMethodEnumType)
	itkSetMacro (InterpolationMethodEnum, InterpolationMethodEnumType)
	itkStaticConstMacro (ImageDimension, unsigned int, TImage::ImageDimension)
	itkTypeMacro (OptimizedImageToImageRegistrationMethod, ImageToImageRegistrationMethod)
void	SetFixedImageSamplesIntensityThreshold (PixelType val)
Public Member Functions inherited from itk::ImageToImageRegistrationMethod< TImage >
const TransformOutputType *	GetOutput (void) const
	itkBooleanMacro (ReportProgress)
	itkGetConstObjectMacro (FixedImage, ImageType)
	itkGetConstObjectMacro (MovingImage, ImageType)
	itkGetConstObjectMacro (FixedImageMaskObject, MaskObjectType)
	itkGetConstObjectMacro (MovingImageMaskObject, MaskObjectType)
	itkGetMacro (RegistrationNumberOfThreads, unsigned int)
	itkGetMacro (UseRegionOfInterest, bool)
	itkGetMacro (RegionOfInterestPoint1, PointType)
	itkGetMacro (RegionOfInterestPoint2, PointType)
	itkGetMacro (UseFixedImageMaskObject, bool)
	itkGetMacro (UseMovingImageMaskObject, bool)
	itkGetMacro (ReportProgress, bool)
	itkGetObjectMacro (Observer, Command)
	itkNewMacro (Self)
	itkSetMacro (RegistrationNumberOfThreads, unsigned int)
	itkSetMacro (UseRegionOfInterest, bool)
	itkSetMacro (RegionOfInterestPoint1, PointType)
	itkSetMacro (RegionOfInterestPoint2, PointType)
	itkSetMacro (UseFixedImageMaskObject, bool)
	itkSetMacro (UseMovingImageMaskObject, bool)
	itkSetMacro (ReportProgress, bool)
	itkSetObjectMacro (Observer, Command)
	itkStaticConstMacro (ImageDimension, unsigned int, TImage::ImageDimension)
	itkTypeMacro (ImageToImageRegistrationMethod, ProcessObject)
void	SetFixedImage (const ImageType *fixedImage)
void	SetFixedImageMaskObject (const MaskObjectType *maskObject)
void	SetMovingImage (const ImageType *movingImage)
void	SetMovingImageMaskObject (const MaskObjectType *maskObject)
void	SetRegionOfInterest (const PointType &point1, const PointType &point2)

Protected Member Functions
	AffineImageToImageRegistrationMethod (void)
void	PrintSelf (std::ostream &os, Indent indent) const ITK_OVERRIDE
virtual	~AffineImageToImageRegistrationMethod (void)
Protected Member Functions inherited from itk::OptimizedImageToImageRegistrationMethod< TImage >
	itkSetMacro (FinalMetricValue, double)
	itkSetMacro (TransformMethodEnum, TransformMethodEnumType)
virtual void	Optimize (MetricType *metric, InterpolatorType *interpolator)
	OptimizedImageToImageRegistrationMethod (void)
virtual	~OptimizedImageToImageRegistrationMethod (void)
Protected Member Functions inherited from itk::ImageToImageRegistrationMethod< TImage >
void	GenerateData (void) ITK_OVERRIDE
unsigned long	GetMTime (void) const ITK_OVERRIDE
	ImageToImageRegistrationMethod (void)
virtual void	Initialize (void)
	itkGetConstObjectMacro (Transform, TransformType)
	itkGetObjectMacro (Transform, TransformType)
	itkSetObjectMacro (Transform, TransformType)
virtual DataObjectPointer	MakeOutput (DataObjectPointerArraySizeType idx) ITK_OVERRIDE
void	PrintSelf (std::ostream &os, Indent indent) const ITK_OVERRIDE
virtual	~ImageToImageRegistrationMethod (void)

Additional Inherited Members
Protected Types inherited from itk::OptimizedImageToImageRegistrationMethod< TImage >
typedef InterpolateImageFunction< TImage, double >	InterpolatorType
typedef ImageToImageMetric< TImage, TImage >	MetricType
Protected Attributes inherited from itk::ImageToImageRegistrationMethod< TImage >
TransformType::Pointer	m_Transform

Detailed Description

template<class TImage>
class itk::AffineImageToImageRegistrationMethod< TImage >

Definition at line 30 of file itkAffineImageToImageRegistrationMethod.h.

Member Typedef Documentation

AffineTransformPointer

template<class TImage >

typedef AffineTransformType::Pointer itk::AffineImageToImageRegistrationMethod< TImage >::AffineTransformPointer

Definition at line 56 of file itkAffineImageToImageRegistrationMethod.h.

AffineTransformType

template<class TImage >

typedef AffineTransform<double, itkGetStaticConstMacro( ImageDimension )> itk::AffineImageToImageRegistrationMethod< TImage >::AffineTransformType

Definition at line 55 of file itkAffineImageToImageRegistrationMethod.h.

ConstPointer

template<class TImage >

typedef SmartPointer<const Self> itk::AffineImageToImageRegistrationMethod< TImage >::ConstPointer

Definition at line 39 of file itkAffineImageToImageRegistrationMethod.h.

Pointer

template<class TImage >

typedef SmartPointer<Self> itk::AffineImageToImageRegistrationMethod< TImage >::Pointer

Definition at line 38 of file itkAffineImageToImageRegistrationMethod.h.

Self

template<class TImage >

typedef AffineImageToImageRegistrationMethod itk::AffineImageToImageRegistrationMethod< TImage >::Self

Definition at line 36 of file itkAffineImageToImageRegistrationMethod.h.

Superclass

template<class TImage >

typedef OptimizedImageToImageRegistrationMethod<TImage> itk::AffineImageToImageRegistrationMethod< TImage >::Superclass

Definition at line 37 of file itkAffineImageToImageRegistrationMethod.h.

TransformType

template<class TImage >

typedef AffineTransformType itk::AffineImageToImageRegistrationMethod< TImage >::TransformType

Definition at line 57 of file itkAffineImageToImageRegistrationMethod.h.

Constructor & Destructor Documentation

AffineImageToImageRegistrationMethod()

template<class TImage >

itk::AffineImageToImageRegistrationMethod< TImage >::AffineImageToImageRegistrationMethod ( void  )

protected

~AffineImageToImageRegistrationMethod()

template<class TImage >

virtual itk::AffineImageToImageRegistrationMethod< TImage >::~AffineImageToImageRegistrationMethod ( void  )

protectedvirtual

Member Function Documentation

GenerateData()

template<class TImage >

void itk::AffineImageToImageRegistrationMethod< TImage >::GenerateData ( void  )

virtual

Reimplemented from itk::OptimizedImageToImageRegistrationMethod< TImage >.

GetAffineTransform()

template<class TImage >

AffineTransformPointer itk::AffineImageToImageRegistrationMethod< TImage >::GetAffineTransform

(

void

)

const

This function creates a new affine transforms that implements the current registration transform. Provided to help with transform composition. The transform is initialized with the current results available in the GetTypedTransform() method. The returned transform is not a member variable, and therefore, must be received into a SmartPointer to prevent it from being destroyed by depletion of its reference counting.

GetTypedTransform() [1/2]

template<class TImage >

TransformType* itk::AffineImageToImageRegistrationMethod< TImage >::GetTypedTransform

(

void

)

The function performs the casting. This function should only appear once in the class hierarchy. It is provided so that member functions that exist only in specific transforms (e.g., SetIdentity) can be called without the caller having to do the casting.

GetTypedTransform() [2/2]

template<class TImage >

const TransformType* itk::AffineImageToImageRegistrationMethod< TImage >::GetTypedTransform

(

void

)

const

itkNewMacro()

template<class TImage >

itk::AffineImageToImageRegistrationMethod< TImage >::itkNewMacro

(

Self

)

itkStaticConstMacro()

template<class TImage >

itk::AffineImageToImageRegistrationMethod< TImage >::itkStaticConstMacro	(	ImageDimension	,
		unsigned	int,
		TImage::ImageDimension
	)

itkTypeMacro()

template<class TImage >

itk::AffineImageToImageRegistrationMethod< TImage >::itkTypeMacro	(	AffineImageToImageRegistrationMethod< TImage >	,
		OptimizedImageToImageRegistrationMethod
	)

PrintSelf()

template<class TImage >

void itk::AffineImageToImageRegistrationMethod< TImage >::PrintSelf ( std::ostream &  os, Indent  indent  ) const

protectedvirtual

Reimplemented from itk::OptimizedImageToImageRegistrationMethod< TImage >.

SetInitialTransformParametersFromAffineTransform()

template<class TImage >

void itk::AffineImageToImageRegistrationMethod< TImage >::SetInitialTransformParametersFromAffineTransform

(

const AffineTransformType *

affine

)

Initialize the transform parameters from an AffineTransform This method is intended as an alternative to calling SetInitialTransformParameters() and SetInitialTransformFixedParameters(). The method below facilitates to use the AffineTransform returned by the InitialImageToImageRegistrationMethod to directly initialize this rigid registration method.

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The documentation for this class was generated from the following file:

• Modules/CLI/ExpertAutomatedRegistration/ITKRegistrationHelper/itkAffineImageToImageRegistrationMethod.h