vtkSegmentationModifier Class Reference

Utility functions for resampling oriented image data. More...

#include <Libs/vtkSegmentationCore/vtkSegmentationModifier.h>

Inheritance diagram for vtkSegmentationModifier:

Collaboration diagram for vtkSegmentationModifier:

Public Types
enum	{ MODE_REPLACE = 0 , MODE_MERGE_MAX , MODE_MERGE_MIN , MODE_MERGE_MASK }
typedef vtkObject	Superclass

Public Member Functions
virtual const char *	GetClassName ()
virtual int	IsA (const char *type)

Static Public Member Functions
static bool	GetSharedSegmentIDsInMask (vtkSegmentation *segmentation, std::string sharedSegmentID, vtkOrientedImageData *mask, const int extent[6], std::vector< std::string > &segmentIDs, int maskThreshold=0.0, bool includeInputSharedSegmentID=false)
static int	IsTypeOf (const char *type)
static bool	ModifyBinaryLabelmap (vtkOrientedImageData *labelmap, vtkSegmentation *segmentation, std::string segmentID, int mergeMode=MODE_REPLACE, const int extent[6]=nullptr, bool minimumOfAllSegments=false, bool sourceRepresentationModifiedEnabled=false, const std::vector< std::string > segmentIdsToOverwrite={}, std::vector< std::string > *modifiedSegmentIDs=nullptr)
static vtkSegmentationModifier *	New ()
static vtkSegmentationModifier *	SafeDownCast (vtkObject *o)

Protected Member Functions
	vtkSegmentationModifier ()
	~vtkSegmentationModifier () override

Static Protected Member Functions
static bool	AppendLabelmapToSegment (vtkOrientedImageData *labelmap, vtkSegmentation *segmentation, std::string segmentID, int mergeMode, const int extent[6], bool minimumOfAllSegments, std::vector< std::string > *modifiedSegmentIDs, bool &segmentLabelmapModified)
static void	GetExtentIntersection (const int extentA[6], const int extentB[6], int extentIntersection[6])
static bool	IsExtentValid (int extent[6])
static void	SeparateModifiedSegmentFromSharedLabelmap (vtkOrientedImageData *labelmap, vtkSegmentation *segmentation, std::string segmentID, const int extent[6], const std::vector< std::string > &segmentIDsToOverwrite)
static bool	SharedLabelmapShouldOverlap (vtkSegmentation *segmentation, std::string segmentID, std::vector< std::string > &segmentIDsToOverwrite)
static void	ShrinkSegmentToEffectiveExtent (vtkOrientedImageData *segmentLabelmap)

Detailed Description

Utility functions for resampling oriented image data.

Definition at line 37 of file vtkSegmentationModifier.h.

Member Typedef Documentation

Superclass

typedef vtkObject vtkSegmentationModifier::Superclass

Definition at line 41 of file vtkSegmentationModifier.h.

Member Enumeration Documentation

anonymous enum

anonymous enum

Set a labelmap image as binary labelmap representation into the segment defined by the segmentation node and segment ID. Source representation must be binary labelmap! Source representation changed event is disabled to prevent deletion of all other representation in all segments. The other representations in the given segment are re-converted. The extent of the segment binary labelmap is shrunk to the effective extent. Display update is triggered.

Parameters

mergeMode	Determines if the labelmap should replace the segment, combined with a maximum or minimum operation, or set under the mask.
extent	If extent is specified then only that extent of the labelmap is used.

Enumerator
MODE_REPLACE
MODE_MERGE_MAX
MODE_MERGE_MIN
MODE_MERGE_MASK

Definition at line 50 of file vtkSegmentationModifier.h.

Constructor & Destructor Documentation

vtkSegmentationModifier()

vtkSegmentationModifier::vtkSegmentationModifier ( )

protected

~vtkSegmentationModifier()

vtkSegmentationModifier::~vtkSegmentationModifier ( )

overrideprotected

Member Function Documentation

AppendLabelmapToSegment()

static bool vtkSegmentationModifier::AppendLabelmapToSegment ( vtkOrientedImageData * labelmap, vtkSegmentation * segmentation, std::string segmentID, int mergeMode, const int extent[6], bool minimumOfAllSegments, std::vector< std::string > * modifiedSegmentIDs, bool & segmentLabelmapModified )

staticprotected

GetClassName()

virtual const char * vtkSegmentationModifier::GetClassName ( )

virtual

GetExtentIntersection()

static void vtkSegmentationModifier::GetExtentIntersection ( const int extentA[6], const int extentB[6], int extentIntersection[6] )

staticprotected

Get the intersection of two extents. If any of the input extents are nullptr or empty (extent[i*2]>extent[i*2+1]) then the extent is considered to be infinite.

Parameters

extentA	first input extent
extentA	second input extent
extentIntersection	computed intersection of the two input extents

GetSharedSegmentIDsInMask()

static bool vtkSegmentationModifier::GetSharedSegmentIDsInMask ( vtkSegmentation * segmentation, std::string sharedSegmentID, vtkOrientedImageData * mask, const int extent[6], std::vector< std::string > & segmentIDs, int maskThreshold = 0.0, bool includeInputSharedSegmentID = false )

static

Get the list of segment IDs in the same shared labelmap that are contained within the mask

Parameters

segmentationNode	Node containing the segmentation
sharedSegmentID	Segment ID of the segment that contains the shared labelmap to be checked
mask	Mask labelmap
segmentIDs	Output list of segment IDs under the mask
includeInputSharedSegmentID	If false, sharedSegmentID will not be added to the list of output segment IDs even if it is within the mask

IsA()

virtual int vtkSegmentationModifier::IsA ( const char * type )

virtual

IsExtentValid()

static bool vtkSegmentationModifier::IsExtentValid ( int extent[6] )

staticprotected

Returns true if the extent is valid, false otherwise

Parameters

Extent

to be validated

IsTypeOf()

static int vtkSegmentationModifier::IsTypeOf ( const char * type )

static

ModifyBinaryLabelmap()

static bool vtkSegmentationModifier::ModifyBinaryLabelmap ( vtkOrientedImageData * labelmap, vtkSegmentation * segmentation, std::string segmentID, int mergeMode = MODE_REPLACE, const int extent[6] = nullptr, bool minimumOfAllSegments = false, bool sourceRepresentationModifiedEnabled = false, const std::vector< std::string > segmentIdsToOverwrite = {}, std::vector< std::string > * modifiedSegmentIDs = nullptr )

static

New()

static vtkSegmentationModifier * vtkSegmentationModifier::New ( )

static

SafeDownCast()

static vtkSegmentationModifier * vtkSegmentationModifier::SafeDownCast ( vtkObject * o )

static

SeparateModifiedSegmentFromSharedLabelmap()

static void vtkSegmentationModifier::SeparateModifiedSegmentFromSharedLabelmap ( vtkOrientedImageData * labelmap, vtkSegmentation * segmentation, std::string segmentID, const int extent[6], const std::vector< std::string > & segmentIDsToOverwrite )

staticprotected

SharedLabelmapShouldOverlap()

static bool vtkSegmentationModifier::SharedLabelmapShouldOverlap ( vtkSegmentation * segmentation, std::string segmentID, std::vector< std::string > & segmentIDsToOverwrite )

staticprotected

ShrinkSegmentToEffectiveExtent()

static void vtkSegmentationModifier::ShrinkSegmentToEffectiveExtent ( vtkOrientedImageData * segmentLabelmap )

staticprotected

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The documentation for this class was generated from the following file:

• Libs/vtkSegmentationCore/vtkSegmentationModifier.h