Slicer  4.13
Slicer is a multi-platform, free and open source software package for visualization and medical image computing
itkImageToImageRegistrationMethodTestingHelper.h
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1 /*=========================================================================
2 
3  Program: Surface Extraction Program
4  Module: $RCSfile: ExtractSurface.cxx,v $
5 
6  Copyright (c) Kitware Inc.
7  All rights reserved.
8  See Copyright.txt or http://www.kitware.com/Copyright.htm for details.
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10  This software is distributed WITHOUT ANY WARRANTY; without even
11  the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR
12  PURPOSE. See the above copyright notice for more information.
13 
14 =========================================================================*/
15 #ifndef itkImageToImageRegistrationMethodTestingHelper_h
16 #define itkImageToImageRegistrationMethodTestingHelper_h
17 
18 #include "itkImageFileReader.h"
19 #include "itkImageFileWriter.h"
20 #include "itkResampleImageFilter.h"
21 #include "itkTestingComparisonImageFilter.h"
22 
23 namespace itk
24 {
25 
31 template <class TRegistrationMethod>
33 {
34 
35  typedef TRegistrationMethod RegistrationMethodType;
36  typedef typename RegistrationMethodType::ImageType ImageType;
37  typedef typename RegistrationMethodType::Pointer RegistrationMethodPointer;
38 
39  typedef itk::ImageFileReader<ImageType> ImageReaderType;
40  typedef itk::ImageFileWriter<ImageType> ImageWriterType;
41 
42  typedef typename ImageReaderType::Pointer ImageReaderPointer;
43  typedef typename ImageWriterType::Pointer ImageWriterPointer;
44 
45  typedef ResampleImageFilter<ImageType, ImageType> ResampleFilterType;
46  typedef typename ResampleFilterType::Pointer ResampleFilterPointer;
47 
48  typedef itk::Testing::ComparisonImageFilter<ImageType, ImageType> DifferenceFilterType;
49  typedef typename DifferenceFilterType::Pointer DifferenceFilterPointer;
50 public:
51 
54 
56  RegistrationMethodType * GetRegistrationMethod();
57 
60  void SetFixedImageFileName( const char * filename );
61 
64  void SetMovingImageFileName( const char * filename );
65 
69  void SetResampledImageFileName( const char * filename );
70 
73  void SetBaselineImageFileName( const char * filename );
74 
76  void SetDifferenceImageFileName( const char * filename );
77 
81  void PrepareRegistration();
82 
85  void RunRegistration();
86 
91  void ReportResults();
92 
95  void ReportImagesMetaData();
96 
100  void ResampleOutputImage();
101 
105  void PerformRegressionTest();
106 
109  void PrintTest();
110 
112  int GetTestResult() const;
113 
116  void SetNumberOfFailedPixelsTolerance( unsigned long numberOfPixels );
117 
120  void SetRadiusTolerance( unsigned long radius );
121 
124  void SetIntensityTolerance( double intensity );
125 
126 protected:
127 private:
128 
129  RegistrationMethodPointer m_RegistrationMethod;
130  ImageReaderPointer m_FixedImageReader;
131  ImageReaderPointer m_MovingImageReader;
132  ImageWriterPointer m_MovingImageWriter;
133  ImageReaderPointer m_BaselineImageReader;
134  ImageWriterPointer m_DifferenceImageWriter;
135  DifferenceFilterPointer m_DifferenceFilter;
136  ResampleFilterPointer m_ResampleFilter;
137  unsigned long m_NumberOfFailedPixelsTolerance;
138  unsigned long m_RadiusTolerance;
139  double m_IntensityTolerance;
140 
141  bool m_ErrorState;
142 };
143 
144 } // end namespace itk
145 
146 #ifndef ITK_MANUAL_INSTANTIATION
147 #include "itkImageToImageRegistrationMethodTestingHelper.txx"
148 #endif
149 
150 #endif
Simplified inverse ITK transforms.
void SetNumberOfFailedPixelsTolerance(unsigned long numberOfPixels)
void SetMovingImageFileName(const char *filename)
RegistrationMethodType * GetRegistrationMethod()
void SetFixedImageFileName(const char *filename)
void SetResampledImageFileName(const char *filename)
void SetBaselineImageFileName(const char *filename)
void SetDifferenceImageFileName(const char *filename)