Slicer  4.11
Slicer is a multi-platform, free and open source software package for visualization and medical image computing
List of all members | Public Types | Public Member Functions | Static Public Member Functions | Protected Member Functions | Protected Attributes
vtkMRMLTensorVolumeNode Class Reference

MRML node for representing diffusion weighted MRI volume. More...

#include <Libs/MRML/Core/vtkMRMLTensorVolumeNode.h>

Inheritance diagram for vtkMRMLTensorVolumeNode:
Inheritance graph
[legend]
Collaboration diagram for vtkMRMLTensorVolumeNode:
Collaboration graph
[legend]

Public Types

typedef vtkMRMLScalarVolumeNode Superclass
 
- Public Types inherited from vtkMRMLScalarVolumeNode
typedef vtkMRMLVolumeNode Superclass
 
- Public Types inherited from vtkMRMLVolumeNode
enum  { ImageDataModifiedEvent = 18001 }
 ImageDataModifiedEvent is generated when image data is changed. More...
 
typedef vtkMRMLDisplayableNode Superclass
 
- Public Types inherited from vtkMRMLDisplayableNode
enum  { DisplayModifiedEvent = 17000 }
 
typedef vtkMRMLTransformableNode Superclass
 
- Public Types inherited from vtkMRMLTransformableNode
enum  { TransformModifiedEvent = 15000 }
 TransformModifiedEvent is send when the parent transform is modidied. More...
 
typedef vtkMRMLStorableNode Superclass
 
- Public Types inherited from vtkMRMLStorableNode
typedef vtkMRMLNode Superclass
 
- Public Types inherited from vtkMRMLNode
enum  {
  HierarchyModifiedEvent = 16000, IDChangedEvent = 16001, ReferenceAddedEvent, ReferenceModifiedEvent,
  ReferenceRemovedEvent, ReferencedNodeModifiedEvent
}
 
typedef vtkObject Superclass
 

Public Member Functions

void Copy (vtkMRMLNode *node) override
 
Copy the node's attributes to this object More...
 
vtkMRMLStorageNodeCreateDefaultStorageNode () override
 
Create default storage node or nullptr if does not have one More...
 
vtkMRMLNodeCreateNodeInstance () override
 MRMLNode methods. More...
 
virtual const char * GetClassName ()
 
void GetMeasurementFrameMatrix (double mf[3][3])
 
void GetMeasurementFrameMatrix (vtkMatrix4x4 *mat)
 
const char * GetNodeTagName () override
 
Get node XML tag name (like Volume, Model) More...
 
virtual int GetOrder ()
 
virtual int IsA (const char *type)
 
void PrintSelf (ostream &os, vtkIndent indent) override
 
void ReadXMLAttributes (const char **atts) override
 
Set node attributes More...
 
void SetMeasurementFrameMatrix (const double mf[3][3])
 
Set the Measurement frame matrix from 3x3 array More...
 
void SetMeasurementFrameMatrix (const double xr, const double xa, const double xs, const double yr, const double ya, const double ys, const double zr, const double za, const double zs)
 
void SetMeasurementFrameMatrix (vtkMatrix4x4 *mat)
 
Set/Get the measurement frame matrix from a vtk 4x4 matrix More...
 
virtual void SetOrder (int)
 
void UpdateReferenceID (const char *oldID, const char *newID) override
 
void UpdateReferences () override
 
void WriteXML (ostream &of, int indent) override
 
Write this node's information to a MRML file in XML format. More...
 
- Public Member Functions inherited from vtkMRMLScalarVolumeNode
void CreateDefaultDisplayNodes () override
 
Create and observe default display node More...
 
virtual vtkMRMLScalarVolumeDisplayNodeGetScalarVolumeDisplayNode ()
 
Associated display MRML node More...
 
virtual vtkCodedEntryGetVoxelValueQuantity ()
 
virtual vtkCodedEntryGetVoxelValueUnits ()
 
void PrintSelf (ostream &os, vtkIndent indent) override
 
void SetVoxelValueQuantity (vtkCodedEntry *)
 
void SetVoxelValueUnits (vtkCodedEntry *)
 
- Public Member Functions inherited from vtkMRMLVolumeNode
virtual void ApplyNonLinearTransform (vtkAbstractTransform *transform)
 
void ApplyTransform (vtkAbstractTransform *transform) override
 
void ApplyTransformMatrix (vtkMatrix4x4 *transformMatrix) override
 
bool CanApplyNonLinearTransforms () const override
 
void Copy (vtkMRMLNode *node) override
 
Copy the node's attributes to this object More...
 
void CopyOrientation (vtkMRMLVolumeNode *node)
 
Copy the node's attributes to this object More...
 
void GetBounds (double bounds[6]) override
 
void GetIJKToRASDirectionMatrix (vtkMatrix4x4 *mat)
 
void GetIJKToRASDirections (double dirs[3][3])
 
void GetIJKToRASMatrix (vtkMatrix4x4 *mat)
 
virtual double GetImageBackgroundScalarComponentAsDouble (int component)
 
virtual vtkImageData * GetImageData ()
 
virtual vtkAlgorithmOutput * GetImageDataConnection ()
 Return the input image data pipeline. More...
 
void GetIToRASDirection (double dirs[3])
 
void GetJToRASDirection (double dirs[3])
 
void GetKToRASDirection (double dirs[3])
 
double GetMaxSpacing ()
 
Utility function that returns the max spacing between the 3 orientations More...
 
const itk::MetaDataDictionary & GetMetaDataDictionary () const
 
double GetMinSpacing ()
 
Utility function that returns the min spacing between the 3 orientations More...
 
bool GetModifiedSinceRead () override
 
virtual double * GetOrigin ()
 
virtual void GetOrigin (double &, double &, double &)
 
virtual void GetOrigin (double [3])
 
void GetRASBounds (double bounds[6]) override
 
void GetRASToIJKMatrix (vtkMatrix4x4 *mat)
 
void GetSliceBounds (double bounds[6], vtkMatrix4x4 *rasToSlice)
 
virtual void GetSpacing (double &, double &, double &)
 
virtual double * GetSpacing ()
 
virtual void GetSpacing (double [3])
 
virtual vtkMRMLVolumeDisplayNodeGetVolumeDisplayNode ()
 
Associated display MRML node More...
 
void PrintSelf (ostream &os, vtkIndent indent) override
 
void ProcessMRMLEvents (vtkObject *, unsigned long, void *) override
 
alternative method to propagate events generated in Display nodes More...
 
void ReadXMLAttributes (const char **atts) override
 
Read node attributes from XML file More...
 
virtual void SetAndObserveImageData (vtkImageData *ImageData)
 
void SetIJKToRASDirectionMatrix (vtkMatrix4x4 *mat)
 
void SetIJKToRASDirections (double dirs[3][3])
 
void SetIJKToRASDirections (double ir, double ia, double is, double jr, double ja, double js, double kr, double ka, double ks)
 
void SetIJKToRASMatrix (vtkMatrix4x4 *mat)
 
virtual void SetImageDataConnection (vtkAlgorithmOutput *inputPort)
 
void SetIToRASDirection (double ir, double ia, double is)
 
void SetJToRASDirection (double jr, double ja, double js)
 
void SetKToRASDirection (double kr, double ka, double ks)
 
void SetMetaDataDictionary (const itk::MetaDataDictionary &)
 
Set/Get the ITK MetaDataDictionary More...
 
virtual void SetOrigin (double arg1, double arg2, double arg3)
 
virtual void SetOrigin (double arg[3])
 
void SetRASToIJKMatrix (vtkMatrix4x4 *mat)
 
virtual void SetSpacing (double arg1, double arg2, double arg3)
 
virtual void SetSpacing (double arg[3])
 
void ShiftImageDataExtentToZeroStart ()
 
void UpdateScene (vtkMRMLScene *scene) override
 
Finds the storage node and read the data More...
 
void WriteXML (ostream &of, int indent) override
 
Write this node's information to a MRML file in XML format. More...
 
- Public Member Functions inherited from vtkMRMLDisplayableNode
void AddAndObserveDisplayNodeID (const char *displayNodeID)
 
virtual int GetDisplayClassVisibility (const char *nodeClass)
 
vtkMRMLDisplayNodeGetDisplayNode ()
 
const char * GetDisplayNodeID ()
 
virtual const char * GetDisplayNodeReferenceRole ()
 
virtual int GetDisplayVisibility ()
 
vtkMRMLDisplayNodeGetNthDisplayNode (int n)
 
const char * GetNthDisplayNodeID (int n)
 
int GetNumberOfDisplayNodes ()
 
bool HasDisplayNodeID (const char *displayNodeID)
 
Return true if displayNodeID is in the display node ID list. More...
 
void PrintSelf (ostream &os, vtkIndent indent) override
 
void RemoveAllDisplayNodeIDs ()
 
Remove all display node IDs and associated display nodes. More...
 
void RemoveNthDisplayNodeID (int n)
 
void SetAndObserveDisplayNodeID (const char *displayNodeID)
 
void SetAndObserveNthDisplayNodeID (int n, const char *displayNodeID)
 
virtual void SetDisplayClassVisibility (const char *nodeClass, int visible)
 
virtual void SetDisplayVisibility (int visible)
 
void SetSelectable (int) override
 
virtual void WriteCLI (std::vector< std::string > &vtkNotUsed(commandLine), std::string vtkNotUsed(prefix), int vtkNotUsed(coordinateSystemFlag)=0, int vtkNotUsed(multipleFlag)=1)
 
- Public Member Functions inherited from vtkMRMLTransformableNode
vtkMRMLTransformNodeGetParentTransformNode ()
 
Associated transform MRML node More...
 
const char * GetTransformNodeID ()
 Get referenced transform node id. More...
 
bool HardenTransform ()
 
void PrintSelf (ostream &os, vtkIndent indent) override
 
bool SetAndObserveTransformNodeID (const char *transformNodeID)
 
virtual void TransformPointFromWorld (const double inWorld[3], double outLocal[3])
 
virtual void TransformPointFromWorld (const vtkVector3d &inWorld, vtkVector3d &outLocal)
 
virtual void TransformPointToWorld (const double inLocal[3], double outWorld[3])
 
virtual void TransformPointToWorld (const vtkVector3d &inLocal, vtkVector3d &outWorld)
 
- Public Member Functions inherited from vtkMRMLStorableNode
void AddAndObserveStorageNodeID (const char *storageNodeID)
 
virtual bool AddDefaultStorageNode (const char *filename=nullptr)
 
virtual std::string GetDefaultStorageNodeClassName (const char *filename=nullptr)
 
vtkMRMLStorageNodeGetNthStorageNode (int n)
 
Get associated display MRML node More...
 
const char * GetNthStorageNodeID (int n)
 
int GetNumberOfStorageNodes ()
 
const char * GetSlicerDataType ()
 
vtkMRMLStorageNodeGetStorageNode ()
 
const char * GetStorageNodeID ()
 
virtual vtkTagTableGetUserTagTable ()
 Methods for user-specified metadata. More...
 
bool HasStorageNodeID (const char *storageNodeID)
 
Return true if storageNodeID is in the storage node ID list. More...
 
void PrintSelf (ostream &os, vtkIndent indent) override
 
void SetAndObserveNthStorageNodeID (int n, const char *storageNodeID)
 
void SetAndObserveStorageNodeID (const char *storageNodeID)
 
String ID of the storage MRML node More...
 
void SetSlicerDataType (const char *type)
 
virtual void StorableModified ()
 
- Public Member Functions inherited from vtkMRMLNode
vtkMRMLNodeAddAndObserveNodeReferenceID (const char *referenceRole, const char *referencedNodeID, vtkIntArray *events=nullptr)
 Add and observe a reference node from this node for a specific referenceRole. More...
 
vtkMRMLNodeAddNodeReferenceID (const char *referenceRole, const char *referencedNodeID)
 Convenience method that adds a referencedNodeID at the end of the list. More...
 
void AddNodeReferenceRole (const char *referenceRole, const char *mrmlAttributeName=nullptr, vtkIntArray *events=nullptr)
 Add a referenceRole. More...
 
virtual void AddToSceneOff ()
 
virtual void AddToSceneOn ()
 
virtual void CopyReferences (vtkMRMLNode *node)
 Copy the references of the node into this. More...
 
void CopyWithoutModifiedEvent (vtkMRMLNode *node)
 
void CopyWithScene (vtkMRMLNode *node)
 Copy everything (including Scene and ID) from another node of the same type. More...
 
void CopyWithSceneWithSingleModifiedEvent (vtkMRMLNode *node)
 Copy everything (including Scene and ID) from another node of the same type. More...
 
void CopyWithSingleModifiedEvent (vtkMRMLNode *node)
 
void DisableModifiedEventOff ()
 
void DisableModifiedEventOn ()
 
virtual int EndModify (int previousDisableModifiedEventState)
 End modifying the node. More...
 
virtual int GetAddToScene ()
 node added to MRML scene. More...
 
const char * GetAttribute (const char *name)
 Get value of a name value pair attribute. More...
 
std::vector< std::string > GetAttributeNames ()
 Get all attribute names. More...
 
void GetAttributeNames (vtkStringArray *attributeNames)
 Get all attribute names. Python-wrappable version. More...
 
virtual char * GetDescription ()
 
virtual int GetDisableModifiedEvent ()
 Turn on/off generating InvokeEvent for set macros. More...
 
virtual int GetHideFromEditors ()
 Describes if the node is hidden. More...
 
virtual char * GetID ()
 ID use by other nodes to reference this node in XML. More...
 
virtual int GetInMRMLCallbackFlag ()
 Flags to avoid event loops. More...
 
virtual int GetModifiedEventPending ()
 
virtual char * GetName ()
 
vtkMRMLNodeGetNodeReference (const char *referenceRole)
 
const char * GetNodeReferenceID (const char *referenceRole)
 Utility function that returns the first node id for a specific referenceRole. More...
 
void GetNodeReferenceIDs (const char *referenceRole, std::vector< const char *> &referencedNodeIDs)
 Return a list of the referenced node IDs. More...
 
void GetNodeReferenceRoles (std::vector< std::string > &roles)
 
void GetNodeReferences (const char *referenceRole, std::vector< vtkMRMLNode *> &nodes)
 Return a list of the referenced nodes. More...
 
vtkMRMLNodeGetNthNodeReference (const char *referenceRole, int n)
 Get referenced MRML node for a specific referenceRole. More...
 
const char * GetNthNodeReferenceID (const char *referenceRole, int n)
 Return the string of the Nth node ID for a specific reference role. More...
 
const char * GetNthNodeReferenceRole (int n)
 
int GetNumberOfNodeReferenceRoles ()
 
int GetNumberOfNodeReferences (const char *referenceRole)
 Return the number of node IDs for a specific reference role (and nodes as they always have the same size). More...
 
virtual int GetSaveWithScene ()
 Save node with MRML scene. More...
 
virtual vtkMRMLSceneGetScene ()
 Get the scene this node has been added to. More...
 
virtual int GetSelectable ()
 Describes if the node is selectable. More...
 
virtual int GetSelected ()
 Get/Set for Selected. More...
 
virtual char * GetSingletonTag ()
 
virtual bool GetUndoEnabled ()
 
bool HasNodeReferenceID (const char *referenceRole, const char *referencedNodeID)
 Return true if referencedNodeID is in the node ID list for a specific referenceRole. More...
 
virtual void HideFromEditorsOff ()
 
virtual void HideFromEditorsOn ()
 
virtual void InvokeCustomModifiedEvent (int eventId, void *callData=nullptr)
 This method allows the node to compress events. More...
 
virtual int InvokePendingModifiedEvent ()
 Invokes any modified events that are pending. More...
 
bool IsSingleton ()
 
void Modified () override
 Customized version of Modified() allowing to compress vtkCommand::ModifiedEvent. More...
 
virtual void OnNodeAddedToScene ()
 
void PrintSelf (ostream &os, vtkIndent indent) override
 
virtual void ProcessChildNode (vtkMRMLNode *)
 Set dependencies between this node and a child node when parsing XML file. More...
 
void RemoveAttribute (const char *name)
 Remove attribute with the specified name. More...
 
void RemoveNodeReferenceIDs (const char *referenceRole)
 Remove all node IDs and associated nodes for a specific referenceRole. More...
 
void RemoveNthNodeReferenceID (const char *referenceRole, int n)
 Convenience method that removes the Nth node ID from the list. More...
 
virtual void Reset (vtkMRMLNode *defaultNode)
 Reset node attributes to the initial state as defined in the constructor or the passed default node. More...
 
virtual void SaveWithSceneOff ()
 
virtual void SaveWithSceneOn ()
 
virtual void SelectableOff ()
 
virtual void SelectableOn ()
 
virtual void SelectedOff ()
 
virtual void SelectedOn ()
 
virtual void SetAddToScene (int)
 
void SetAddToSceneNoModify (int value)
 
vtkMRMLNodeSetAndObserveNodeReferenceID (const char *referenceRole, const char *referencedNodeID, vtkIntArray *events=nullptr)
 Set and observe a reference node from this node for a specific referenceRole. More...
 
vtkMRMLNodeSetAndObserveNthNodeReferenceID (const char *referenceRole, int n, const char *referencedNodeID, vtkIntArray *events=nullptr)
 Set and observe the Nth node ID for a specific reference role. More...
 
void SetAttribute (const char *name, const char *value)
 Set a name value pair attribute. More...
 
virtual void SetDescription (const char *)
 Text description of this node, to be set by the user. More...
 
void SetDisableModifiedEvent (int onOff)
 
virtual void SetHideFromEditors (int)
 
void SetInMRMLCallbackFlag (int flag)
 
virtual void SetName (const char *)
 Name of this node, to be set by the user. More...
 
vtkMRMLNodeSetNodeReferenceID (const char *referenceRole, const char *referencedNodeID)
 Set a reference to a node with specified nodeID from this node for a specific referenceRole. More...
 
vtkMRMLNodeSetNthNodeReferenceID (const char *referenceRole, int n, const char *referencedNodeID)
 Set a N-th reference from this node with specified referencedNodeID for a specific referenceRole. More...
 
virtual void SetSaveWithScene (int)
 
virtual void SetScene (vtkMRMLScene *scene)
 This method is for internal use only. Use AddNode method of vtkMRMLScene to add a node to the scene. More...
 
virtual void SetSceneReferences ()
 Update the references of the node to the scene. More...
 
virtual void SetSelected (int)
 
void SetSingletonOff ()
 
void SetSingletonOn ()
 
virtual void SetSingletonTag (const char *)
 Tag that make this node a singleton in the scene. More...
 
virtual void SetUndoEnabled (bool)
 
virtual int StartModify ()
 Start modifying the node. Disable Modify events. More...
 
virtual void UndoEnabledOff ()
 
virtual void UndoEnabledOn ()
 
const char * URLDecodeString (const char *inString)
 Decode a URL string. More...
 
const char * URLEncodeString (const char *inString)
 Encode a URL string. More...
 
virtual void WriteNodeBodyXML (ostream &of, int indent)
 Write this node's body to a MRML file in XML format. More...
 
std::string XMLAttributeDecodeString (const std::string &inString)
 Decode an XML attribute string. More...
 
std::string XMLAttributeEncodeString (const std::string &inString)
 Encode an XML attribute string (replaces special characters by code sequences) More...
 

Static Public Member Functions

static int IsTypeOf (const char *type)
 
static vtkMRMLTensorVolumeNodeNew ()
 
static vtkMRMLTensorVolumeNodeSafeDownCast (vtkObject *o)
 
- Static Public Member Functions inherited from vtkMRMLScalarVolumeNode
static void CreateNoneNode (vtkMRMLScene *scene)
 
Make a 'None' volume node with blank image data More...
 
static int IsTypeOf (const char *type)
 
static vtkMRMLScalarVolumeNodeNew ()
 
static vtkMRMLScalarVolumeNodeSafeDownCast (vtkObject *o)
 
- Static Public Member Functions inherited from vtkMRMLVolumeNode
static bool ComputeIJKToRASFromScanOrder (const char *order, const double *spacing, const int *dims, bool centerImage, vtkMatrix4x4 *IJKToRAS)
 RAS->IJK Matrix Calculation. More...
 
static const char * ComputeScanOrderFromIJKToRAS (vtkMatrix4x4 *IJKToRAS)
 
static int IsTypeOf (const char *type)
 
static vtkMRMLVolumeNodeSafeDownCast (vtkObject *o)
 
- Static Public Member Functions inherited from vtkMRMLDisplayableNode
static int IsTypeOf (const char *type)
 
static vtkMRMLDisplayableNodeSafeDownCast (vtkObject *o)
 
- Static Public Member Functions inherited from vtkMRMLTransformableNode
static int IsTypeOf (const char *type)
 
static vtkMRMLTransformableNodeSafeDownCast (vtkObject *o)
 
- Static Public Member Functions inherited from vtkMRMLStorableNode
static int IsTypeOf (const char *type)
 
static vtkMRMLStorableNodeSafeDownCast (vtkObject *o)
 
- Static Public Member Functions inherited from vtkMRMLNode
static int IsTypeOf (const char *type)
 
static vtkMRMLNodeSafeDownCast (vtkObject *o)
 

Protected Member Functions

void operator= (const vtkMRMLTensorVolumeNode &)
 
 vtkMRMLTensorVolumeNode ()
 
 vtkMRMLTensorVolumeNode (const vtkMRMLTensorVolumeNode &)
 
 ~vtkMRMLTensorVolumeNode () override
 
- Protected Member Functions inherited from vtkMRMLScalarVolumeNode
void operator= (const vtkMRMLScalarVolumeNode &)
 
 vtkMRMLScalarVolumeNode ()
 
 vtkMRMLScalarVolumeNode (const vtkMRMLScalarVolumeNode &)
 
 ~vtkMRMLScalarVolumeNode () override
 
- Protected Member Functions inherited from vtkMRMLVolumeNode
virtual void GetBoundsInternal (double bounds[6], vtkMatrix4x4 *rasToSlice, bool useTransform)
 
void OnNodeReferenceAdded (vtkMRMLNodeReference *reference) override
 
Called when a node reference ID is added (list size increased). More...
 
void OnNodeReferenceModified (vtkMRMLNodeReference *reference) override
 
Called when a node reference ID is modified. More...
 
void operator= (const vtkMRMLVolumeNode &)
 
void SetImageDataToDisplayNode (vtkMRMLVolumeDisplayNode *displayNode)
 
void SetImageDataToDisplayNodes ()
 Set the image data pipeline to all the display nodes. More...
 
virtual void UpdateDisplayNodeImageData (vtkMRMLDisplayNode *dnode)
 
 vtkMRMLVolumeNode ()
 
 vtkMRMLVolumeNode (const vtkMRMLVolumeNode &)
 
 ~vtkMRMLVolumeNode () override
 
- Protected Member Functions inherited from vtkMRMLDisplayableNode
virtual const char * GetDisplayNodeReferenceMRMLAttributeName ()
 
void OnNodeReferenceRemoved (vtkMRMLNodeReference *reference) override
 
Called after a node reference ID is removed (list size decreased). More...
 
void operator= (const vtkMRMLDisplayableNode &)
 
 vtkMRMLDisplayableNode ()
 
 vtkMRMLDisplayableNode (const vtkMRMLDisplayableNode &)
 
 ~vtkMRMLDisplayableNode () override
 
- Protected Member Functions inherited from vtkMRMLTransformableNode
virtual const char * GetTransformNodeReferenceMRMLAttributeName ()
 
virtual const char * GetTransformNodeReferenceRole ()
 
void OnNodeReferenceRemoved (vtkMRMLNodeReference *reference) override
 
Called after a node reference ID is removed (list size decreased). More...
 
virtual void OnTransformNodeReferenceChanged (vtkMRMLTransformNode *transformNode)
 Called when transform node reference added/modified/removed. More...
 
void operator= (const vtkMRMLTransformableNode &)
 
 vtkMRMLTransformableNode ()
 
 vtkMRMLTransformableNode (const vtkMRMLTransformableNode &)
 
 ~vtkMRMLTransformableNode () override
 
- Protected Member Functions inherited from vtkMRMLStorableNode
virtual const char * GetStorageNodeReferenceMRMLAttributeName ()
 
virtual const char * GetStorageNodeReferenceRole ()
 
virtual vtkTimeStamp GetStoredTime ()
 
void operator= (const vtkMRMLStorableNode &)
 
 vtkMRMLStorableNode ()
 
 vtkMRMLStorableNode (const vtkMRMLStorableNode &)
 
 ~vtkMRMLStorableNode () override
 
- Protected Member Functions inherited from vtkMRMLNode
virtual const char * GetMRMLAttributeNameFromReferenceRole (const char *refRole)
 Return the mrml attribute name (if found) associated with a reference role. Return 0 otherwise. More...
 
virtual const char * GetReferenceRoleFromMRMLAttributeName (const char *attName)
 Return the reference role (if found) associated with the attribute name found in a MRML scene file. Return 0 otherwise. More...
 
virtual char * GetTempURLString ()
 
void GetUpdatedReferencedNodeEventList (int &oldReferencedNodeUseCount, int &newReferencedNodeUseCount, vtkIntArray *oldConsolidatedEventList, vtkIntArray *newConsolidatedEventList, vtkMRMLNode *oldReferencedNode, vtkMRMLNode *newReferencedNode, vtkMRMLNodeReference *referenceToIgnore, vtkIntArray *newEvents)
 
virtual void InvalidateNodeReferences ()
 
virtual bool IsReferenceRoleGeneric (const char *refRole)
 Return true if the reference role is generic (ends with '/') or false otherwise. More...
 
void operator= (const vtkMRMLNode &)
 
void ParseReferencesAttribute (const char *attValue, std::map< std::string, std::string > &references)
 
virtual void SetTempURLString (const char *)
 Get/Set the string used to manage encoding/decoding of strings/URLs with special characters. More...
 
vtkMRMLNodeUpdateNodeReferenceEventObserver (vtkMRMLNode *oldReferencedNode, vtkMRMLNode *newReferencedNode, vtkIntArray *newEvents, vtkMRMLNodeReference *referenceToIgnore)
 
virtual void UpdateNodeReferences (const char *referenceRole=nullptr)
 
virtual void UpdateNthNodeReference (const char *referenceRole, int n)
 
 vtkMRMLNode ()
 
 vtkMRMLNode (const vtkMRMLNode &)
 
 ~vtkMRMLNode () override
 critical to have a virtual destructor! More...
 

Protected Attributes

double MeasurementFrameMatrix [3][3]
 
int Order
 
- Protected Attributes inherited from vtkMRMLScalarVolumeNode
vtkCodedEntryVoxelValueQuantity
 
vtkCodedEntryVoxelValueUnits
 
- Protected Attributes inherited from vtkMRMLVolumeNode
vtkEventForwarderCommand * DataEventForwarder
 
itk::MetaDataDictionary Dictionary
 
double IJKToRASDirections [3][3]
 these are unit length direction cosines More...
 
vtkAlgorithmOutput * ImageDataConnection
 
double Origin [3]
 
double Spacing [3]
 these are mappings to mm space More...
 
- Protected Attributes inherited from vtkMRMLStorableNode
std::string SlicerDataType
 
vtkTimeStamp StorableModifiedTime
 
vtkTagTableUserTagTable
 
- Protected Attributes inherited from vtkMRMLNode
int AddToScene
 
AttributesType Attributes
 
char * Description
 
int HideFromEditors
 
char * ID
 
int InMRMLCallbackFlag
 
Flag to avoid event loops More...
 
vtkCallbackCommand * MRMLCallbackCommand
 Holders for MRML callbacks. More...
 
vtkObserverManagerMRMLObserverManager
 
char * Name
 
NodeReferenceEventsType NodeReferenceEvents
 
std::map< std::string, std::string > NodeReferenceMRMLAttributeNames
 
NodeReferencesType NodeReferences
 
int SaveWithScene
 
vtkWeakPointer< vtkMRMLSceneScene
 
int Selectable
 
int Selected
 
bool UndoEnabled
 

Additional Inherited Members

- Protected Types inherited from vtkMRMLNode
typedef std::map< std::string, std::string > AttributesType
 
typedef std::map< std::string, vtkSmartPointer< vtkIntArray > > NodeReferenceEventsType
 
typedef std::vector< vtkSmartPointer< vtkMRMLNodeReference > > NodeReferenceListType
 
typedef std::map< std::string, NodeReferenceListTypeNodeReferencesType
 
- Static Protected Member Functions inherited from vtkMRMLNode
static void MRMLCallback (vtkObject *caller, unsigned long eid, void *clientData, void *callData)
 
- Static Protected Attributes inherited from vtkMRMLDisplayableNode
static const char * DisplayNodeReferenceMRMLAttributeName
 
static const char * DisplayNodeReferenceRole
 
- Static Protected Attributes inherited from vtkMRMLTransformableNode
static const char * TransformNodeReferenceMRMLAttributeName
 
static const char * TransformNodeReferenceRole
 
- Static Protected Attributes inherited from vtkMRMLStorableNode
static const char * StorageNodeReferenceMRMLAttributeName
 
static const char * StorageNodeReferenceRole
 

Detailed Description

MRML node for representing diffusion weighted MRI volume.

Diffusion Weigthed Volume nodes describe data sets that encode diffusion weigthed images. These images are the basis for computing the diffusion tensor. The node is a container for the necessary information to interpert DW images:

  1. Gradient information.
  2. B value for each gradient.
  3. Measurement frame that relates the coordinate system where the gradients are given to RAS.

Definition at line 34 of file vtkMRMLTensorVolumeNode.h.

Member Typedef Documentation

◆ Superclass

Definition at line 38 of file vtkMRMLTensorVolumeNode.h.

Constructor & Destructor Documentation

◆ vtkMRMLTensorVolumeNode() [1/2]

vtkMRMLTensorVolumeNode::vtkMRMLTensorVolumeNode ( )
protected

◆ ~vtkMRMLTensorVolumeNode()

vtkMRMLTensorVolumeNode::~vtkMRMLTensorVolumeNode ( )
overrideprotected

◆ vtkMRMLTensorVolumeNode() [2/2]

vtkMRMLTensorVolumeNode::vtkMRMLTensorVolumeNode ( const vtkMRMLTensorVolumeNode )
protected

Member Function Documentation

◆ Copy()

void vtkMRMLTensorVolumeNode::Copy ( vtkMRMLNode node)
overridevirtual


Copy the node's attributes to this object

Reimplemented from vtkMRMLScalarVolumeNode.

Reimplemented in vtkMRMLVectorVolumeNode.

◆ CreateDefaultStorageNode()

vtkMRMLStorageNode* vtkMRMLTensorVolumeNode::CreateDefaultStorageNode ( )
overridevirtual


Create default storage node or nullptr if does not have one

Reimplemented from vtkMRMLScalarVolumeNode.

Reimplemented in vtkMRMLVectorVolumeNode.

◆ CreateNodeInstance()

vtkMRMLNode* vtkMRMLTensorVolumeNode::CreateNodeInstance ( )
overridevirtual

MRMLNode methods.

Reimplemented from vtkMRMLScalarVolumeNode.

Reimplemented in vtkMRMLVectorVolumeNode.

◆ GetClassName()

virtual const char* vtkMRMLTensorVolumeNode::GetClassName ( )
virtual

◆ GetMeasurementFrameMatrix() [1/2]

void vtkMRMLTensorVolumeNode::GetMeasurementFrameMatrix ( double  mf[3][3])

◆ GetMeasurementFrameMatrix() [2/2]

void vtkMRMLTensorVolumeNode::GetMeasurementFrameMatrix ( vtkMatrix4x4 *  mat)

◆ GetNodeTagName()

const char* vtkMRMLTensorVolumeNode::GetNodeTagName ( )
inlineoverridevirtual


Get node XML tag name (like Volume, Model)

Reimplemented from vtkMRMLScalarVolumeNode.

Reimplemented in vtkMRMLVectorVolumeNode.

Definition at line 57 of file vtkMRMLTensorVolumeNode.h.

◆ GetOrder()

virtual int vtkMRMLTensorVolumeNode::GetOrder ( )
virtual

◆ IsA()

virtual int vtkMRMLTensorVolumeNode::IsA ( const char *  type)
virtual

◆ IsTypeOf()

static int vtkMRMLTensorVolumeNode::IsTypeOf ( const char *  type)
static

◆ New()

static vtkMRMLTensorVolumeNode* vtkMRMLTensorVolumeNode::New ( )
static

◆ operator=()

void vtkMRMLTensorVolumeNode::operator= ( const vtkMRMLTensorVolumeNode )
protected

◆ PrintSelf()

void vtkMRMLTensorVolumeNode::PrintSelf ( ostream &  os,
vtkIndent  indent 
)
override

◆ ReadXMLAttributes()

void vtkMRMLTensorVolumeNode::ReadXMLAttributes ( const char **  atts)
overridevirtual


Set node attributes

Reimplemented from vtkMRMLScalarVolumeNode.

Reimplemented in vtkMRMLVectorVolumeNode.

◆ SafeDownCast()

static vtkMRMLTensorVolumeNode* vtkMRMLTensorVolumeNode::SafeDownCast ( vtkObject *  o)
static

◆ SetMeasurementFrameMatrix() [1/3]

void vtkMRMLTensorVolumeNode::SetMeasurementFrameMatrix ( const double  mf[3][3])


Set the Measurement frame matrix from 3x3 array

◆ SetMeasurementFrameMatrix() [2/3]

void vtkMRMLTensorVolumeNode::SetMeasurementFrameMatrix ( const double  xr,
const double  xa,
const double  xs,
const double  yr,
const double  ya,
const double  ys,
const double  zr,
const double  za,
const double  zs 
)

Description Set the measurement frame matrix from doubles

◆ SetMeasurementFrameMatrix() [3/3]

void vtkMRMLTensorVolumeNode::SetMeasurementFrameMatrix ( vtkMatrix4x4 *  mat)


Set/Get the measurement frame matrix from a vtk 4x4 matrix

◆ SetOrder()

virtual void vtkMRMLTensorVolumeNode::SetOrder ( int  )
virtual

◆ UpdateReferenceID()

void vtkMRMLTensorVolumeNode::UpdateReferenceID ( const char *  oldID,
const char *  newID 
)
inlineoverridevirtual

Description: Update the stored reference to another node in the scene

Reimplemented from vtkMRMLNode.

Definition at line 67 of file vtkMRMLTensorVolumeNode.h.

◆ UpdateReferences()

void vtkMRMLTensorVolumeNode::UpdateReferences ( )
inlineoverridevirtual

Updates this node if it depends on other nodes when the node is deleted in the scene

Reimplemented from vtkMRMLNode.

Definition at line 62 of file vtkMRMLTensorVolumeNode.h.

◆ WriteXML()

void vtkMRMLTensorVolumeNode::WriteXML ( ostream &  of,
int  indent 
)
overridevirtual


Write this node's information to a MRML file in XML format.

Reimplemented from vtkMRMLScalarVolumeNode.

Reimplemented in vtkMRMLVectorVolumeNode.

Member Data Documentation

◆ MeasurementFrameMatrix

double vtkMRMLTensorVolumeNode::MeasurementFrameMatrix[3][3]
protected

Definition at line 100 of file vtkMRMLTensorVolumeNode.h.

◆ Order

int vtkMRMLTensorVolumeNode::Order
protected

Definition at line 101 of file vtkMRMLTensorVolumeNode.h.


The documentation for this class was generated from the following file: